Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1457 Ceratophyllum demersum HOM05D000207 ORTHO05D021224 1.7e-103 379.4 197 100.0
CDE11G0142 Ceratophyllum demersum HOM05D000207 ORTHO05D001482 3.2e-54 215.7 128 92.2
Cc04_g06050 Coffea canephora HOM05D000207 ORTHO05D001482 7.4e-19 98.2 127 56.7
Dinv19286 Davidia involucrata HOM05D000207 ORTHO05D001482 2.8e-18 96.3 145 51.7
Lj5A160G54 Lonicera japonica HOM05D000207 ORTHO05D001482 6.3e-18 95.1 156 49.4
CsaV3_1G004940 Cucumis sativus L. HOM05D000207 ORTHO05D001482 1.2e-16 90.9 141 51.8
Sc12g0007800 Simmondsia chinensis HOM05D000207 ORTHO05D001482 1.5e-16 90.5 138 50.7
Nn4g24307 Nelumbo nucifera HOM05D000207 ORTHO05D001482 2.6e-16 89.7 154 48.7
MELO3C001921.2 Cucumis melo HOM05D000207 ORTHO05D001482 7.7e-16 88.2 141 51.1
Sopen06g026210 Solanum pennellii HOM05D000207 ORTHO05D001482 1.0e-15 87.8 134 49.3
Dinv06370 Davidia involucrata HOM05D000207 ORTHO05D001482 1.7e-15 87.0 154 46.1
Manes.14G172600 Manihot esculenta HOM05D000207 ORTHO05D001482 3.8e-15 85.9 141 49.6
ClCG04G012840 Citrullus lanatus HOM05D004962 ORTHO05D001482 1.5e-14 84.0 141 50.4
MD14G1238200 Malus domestica HOM05D000207 ORTHO05D001482 3.2e-14 82.8 143 48.3
PGR083G0979 Punica granatum HOM05D000207 ORTHO05D001482 3.2e-14 82.8 125 51.2
Sed0006423 Sechium edule HOM05D000207 ORTHO05D001482 3.2e-14 82.8 143 50.3
FAN08G3461 Fragaria x ananassa HOM05D000207 ORTHO05D001482 4.2e-14 82.4 144 49.3
Nn3g18331 Nelumbo nucifera HOM05D000207 ORTHO05D001482 5.5e-14 82.0 157 45.9
CSS0020226 Camellia sinensis var. sinensis HOM05D000207 ORTHO05D001482 7.2e-14 81.6 165 43.0
CAN.G843.39 Capsicum annuum HOM05D000207 ORTHO05D001482 9.4e-14 81.3 130 45.4
Solyc06g068920.3 Solanum lycopersicum HOM05D000207 ORTHO05D001482 9.4e-14 81.3 130 46.2
Solyc03g118530.3 Solanum lycopersicum HOM05D000207 ORTHO05D001482 3.6e-13 79.3 138 47.8
Sopen03g037470 Solanum pennellii HOM05D000207 ORTHO05D001482 3.6e-13 79.3 138 47.8
TAR371G0331 Trochodendron aralioides HOM05D000207 ORTHO05D001482 3.6e-13 79.3 145 46.9
Cpa.g.sc3.373 Carica papaya HOM05D000207 ORTHO05D001482 4.7e-13 79.0 145 46.9
MD06G1231400 Malus domestica HOM05D000207 ORTHO05D001482 6.1e-13 78.6 144 47.9
Actinidia09074 Actinidia chinensis HOM05D000207 ORTHO05D001482 8.0e-13 78.2 127 52.0
A01p36540 Brassica napus HOM05D000207 ORTHO05D001482 8.0e-13 78.2 125 51.2
BraA01t03717Z Brassica rapa HOM05D000207 ORTHO05D001482 8.0e-13 78.2 125 51.2
Cfa019626 Carpinus fangiana HOM05D000207 ORTHO05D001482 8.0e-13 78.2 140 46.4
Medtr6g470940 Medicago truncatula HOM05D000207 ORTHO05D001482 8.0e-13 78.2 145 44.1
Oeu015094.1 Olea europaea HOM05D000207 ORTHO05D001482 1.8e-12 77.0 140 44.3
BcaB06g25849 Brassica carinata HOM05D000207 ORTHO05D001482 3.9e-12 75.9 141 46.8
FAN04G0107 Fragaria x ananassa HOM05D000207 ORTHO05D001482 5.2e-12 75.5 149 45.6
C05p48500 Brassica napus HOM05D000207 ORTHO05D001482 6.7e-12 75.1 126 50.0
AUR62042014 Chenopodium quinoa HOM05D000207 ORTHO05D001482 8.8e-12 74.7 123 48.0
TAR629G3013 Trochodendron aralioides HOM05D000207 ORTHO05D001482 8.8e-12 74.7 146 45.9
AL3G31010 Arabidopsis lyrata HOM05D000207 ORTHO05D001482 1.1e-11 74.3 137 48.9
BraA05t22027Z Brassica rapa HOM05D000207 ORTHO05D001482 1.1e-11 74.3 132 51.5
arahy.Tifrunner.gnm1.ann1.R9E8HA Arachis hypogaea HOM05D000207 ORTHO05D001482 1.5e-11 73.9 151 42.4
A05p31960 Brassica napus HOM05D000207 ORTHO05D001482 1.5e-11 73.9 131 51.1
HanXRQChr05g0142661 Helianthus annuus HOM05D000207 ORTHO05D001482 2.0e-11 73.6 132 48.5
Oeu046620.2 Olea europaea HOM05D000207 ORTHO05D001482 2.6e-11 73.2 140 43.6
Thhalv10011190m.g Eutrema salsugineum HOM05D000207 ORTHO05D001482 3.3e-11 72.8 130 46.2
FAN13G1936 Fragaria x ananassa HOM05D000207 ORTHO05D001482 5.7e-11 72.0 141 46.1
Prupe.5G235400 Prunus persica HOM05D000207 ORTHO05D001482 5.7e-11 72.0 151 45.0
BcaC05g28750 Brassica carinata HOM05D000207 ORTHO05D001482 9.7e-11 71.2 126 49.2
BolC5t33585H Brassica oleracea HOM05D000207 ORTHO05D001482 9.7e-11 71.2 126 49.2
RcHm_v2.0_Chr7g0178091 Rosa chinensis HOM05D000207 ORTHO05D001482 9.7e-11 71.2 145 46.2
PSO017G0937 Papaver somniferum HOM05D000207 ORTHO05D001482 1.3e-10 70.9 141 43.3
PGSC0003DMG401028785 Solanum tuberosum HOM05D000207 ORTHO05D001482 1.3e-10 70.9 126 42.9
Lsat_1_v5_gn_0_34000 Lactuca sativa HOM05D000207 ORTHO05D001482 1.7e-10 70.5 150 44.7
Sp3g15970 Schrenkiella parvula HOM05D000207 ORTHO05D001482 2.2e-10 70.1 148 45.9
Carub.0003s1756 Capsella rubella HOM05D000207 ORTHO05D001482 2.8e-10 69.7 144 46.5
CAN.G423.36 Capsicum annuum HOM05D000207 ORTHO05D001482 2.8e-10 69.7 122 41.8
HanXRQChr17g0545761 Helianthus annuus HOM05D000207 ORTHO05D001482 2.8e-10 69.7 154 43.5
SalBow1G6464 Salvia bowleyana HOM05D000207 ORTHO05D001482 3.7e-10 69.3 140 43.6
AT3G17850 Arabidopsis thaliana HOM05D000207 ORTHO05D001482 4.8e-10 68.9 141 45.4
Lsat_1_v5_gn_8_500 Lactuca sativa HOM05D000207 ORTHO05D001482 4.8e-10 68.9 154 42.2
Nitab4.5_0002046g0090 Nicotiana tabacum HOM05D000207 ORTHO05D001482 4.8e-10 68.9 154 42.2
Potri.015G035600 Populus trichocarpa HOM05D000207 ORTHO05D001482 4.8e-10 68.9 151 42.4
TWI81G0602 Tripterygium wilfordii HOM05D000207 ORTHO05D001482 4.8e-10 68.9 133 48.1
arahy.Tifrunner.gnm1.ann1.ZH4NLG Arachis hypogaea HOM05D000207 ORTHO05D001482 6.3e-10 68.6 151 42.4
CARHR093200 Cardamine hirsuta HOM05D000207 ORTHO05D001482 6.3e-10 68.6 149 46.3
Duzib084G1277 Durio zibethinus HOM05D000207 ORTHO05D001482 6.3e-10 68.6 147 42.9
PSO478G1550 Papaver somniferum HOM05D000207 ORTHO05D001482 6.3e-10 68.6 141 42.6
TWI15G0123 Tripterygium wilfordii HOM05D000207 ORTHO05D001482 6.3e-10 68.6 136 46.3
HPP92_011111 Vanilla planifolia HOM05D000207 ORTHO05D021224 6.3e-10 68.6 190 36.8
Migut.D01202 Erythranthe guttata HOM05D000207 ORTHO05D001482 1.1e-09 67.8 148 43.2
Nitab4.5_0002450g0170 Nicotiana tabacum HOM05D000207 ORTHO05D001482 1.1e-09 67.8 143 44.8
Potri.012G044700 Populus trichocarpa HOM05D000207 ORTHO05D001482 1.1e-09 67.8 151 43.0
FvH4_5g17560 Fragaria vesca HOM05D000207 ORTHO05D001482 1.4e-09 67.4 146 43.8
FAN18G3020 Fragaria x ananassa HOM05D000207 ORTHO05D001482 1.4e-09 67.4 146 43.8
QL10p031124 Quercus lobata HOM05D000207 ORTHO05D021224 2.4e-09 66.6 140 45.0
Haze_18897 Corylus avellana HOM05D000207 ORTHO05D001482 3.1e-09 66.2 136 44.9
Sabra12G0031200 Salix brachista HOM05D000207 ORTHO05D001482 3.1e-09 66.2 150 42.7
MSTRG.9362 Avicennia marina HOM05D000207 ORTHO05D001482 5.3e-09 65.5 135 43.0
Peaxi162Scf00207g00139 Petunia axillaris HOM05D000207 ORTHO05D001482 5.3e-09 65.5 132 45.5
Peaxi162Scf00314g00041 Petunia axillaris HOM05D000207 ORTHO05D001482 5.3e-09 65.5 126 46.0
AUR62033097 Chenopodium quinoa HOM05D000207 ORTHO05D001482 7.0e-09 65.1 129 45.0
COL.COLO4_28879 Corchorus olitorius HOM05D000207 ORTHO05D001482 1.2e-08 64.3 144 42.4
TPR.G25365 Trifolium pratense HOM05D000207 ORTHO05D001482 1.2e-08 64.3 160 39.4
Psat1g030480 Pisum sativum HOM05D000207 ORTHO05D001482 1.6e-08 63.9 173 36.4
Thecc.03G059700 Theobroma cacao HOM05D000207 ORTHO05D001482 2.0e-08 63.5 133 42.9
BcaB04g20811 Brassica carinata HOM05D000207 ORTHO05D001482 2.6e-08 63.2 147 42.9
Atru.chr9.1642 Acer truncatum HOM05D000207 ORTHO05D001482 4.5e-08 62.4 166 38.0
BcaC07g37131 Brassica carinata HOM05D000207 ORTHO05D001482 4.5e-08 62.4 124 46.0
Thhalv10019909m.g Eutrema salsugineum HOM05D000207 ORTHO05D001482 5.9e-08 62.0 148 45.3
Eucgr.H00538 Eucalyptus grandis HOM05D000207 ORTHO05D001482 7.7e-08 61.6 178 39.3
vmacro17771 Vaccinium macrocarpon HOM05D000207 ORTHO05D001482 7.7e-08 61.6 148 46.6
Gohir.A09G175100 Gossypium hirsutum HOM05D000207 ORTHO05D001482 1.0e-07 61.2 127 42.5
Gorai.006G191300 Gossypium raimondii HOM05D000207 ORTHO05D001482 1.3e-07 60.8 127 41.7
Gohir.D09G169800 Gossypium hirsutum HOM05D000207 ORTHO05D001482 1.7e-07 60.5 127 42.5
SGA_v2.0_scaffold74G24660 Striga asiatica HOM05D000207 ORTHO05D001482 1.7e-07 60.5 156 39.1
Aa31LG8G4730 Aethionema arabicum HOM05D000207 ORTHO05D001482 2.9e-07 59.7 148 41.9
MSTRG.4633 Avicennia marina HOM05D000207 ORTHO05D001482 2.9e-07 59.7 146 38.4
C08p05020 Brassica napus HOM05D000207 ORTHO05D001482 2.9e-07 59.7 125 45.6
BolC8t47308H Brassica oleracea HOM05D000207 ORTHO05D001482 2.9e-07 59.7 125 45.6
Phvul.004G149200 Phaseolus vulgaris HOM05D000207 ORTHO05D001482 2.9e-07 59.7 137 38.7
Gohir.D09G169957 Gossypium hirsutum HOM05D000207 ORTHO05D001482 5.0e-07 58.9 127 40.9
BolC1t04597H Brassica oleracea HOM05D000207 ORTHO05D001482 8.5e-07 58.2 124 44.4
DCAR_003537 Daucus carota HOM05D000207 ORTHO05D001482 8.5e-07 58.2 171 38.6
BraA08t32497Z Brassica rapa HOM05D000207 ORTHO05D001482 1.5e-06 57.4 124 42.7
BcaB04g17418 Brassica carinata HOM05D000207 ORTHO05D001482 1.9e-06 57.0 125 44.8
Sabra15G0029400 Salix brachista HOM05D000207 ORTHO05D001482 2.5e-06 56.6 152 39.5
Lalb_Chr14g0370651 Lupinus albus HOM05D000207 ORTHO05D001482 3.2e-06 56.2 140 37.9
CSS0008163 Camellia sinensis var. sinensis HOM05D000207 ORTHO05D001482 4.2e-06 55.8 149 38.3
ECA232G1630 Erigeron canadensis HOM05D000207 ORTHO05D001482 4.2e-06 55.8 132 40.2
AL1G55140 Arabidopsis lyrata HOM05D000207 ORTHO05D001482 5.5e-06 55.5 145 36.6
Lj2g0016478 Lotus japonicus HOM05D000207 ORTHO05D001482 5.5e-06 55.5 144 41.0
CiPaw.16G096700 Carya illinoinensis HOM05D000207 ORTHO05D001482 7.2e-06 55.1 142 40.1
Ah.09g232290 Amaranthus hybridus HOM05D000207 ORTHO05D001482 9.4e-06 54.7 134 38.1


User provided reference genes

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