Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1002 Ceratophyllum demersum HOM05D006293 ORTHO05D007971 3.0e-170 601.7 290 100.0
TAR376G0811 Trochodendron aralioides HOM05D006293 ORTHO05D007971 2.0e-76 290.0 292 52.4
Nn5g29105 Nelumbo nucifera HOM05D006293 ORTHO05D007971 1.8e-74 283.5 298 51.3
Cc02_g16450 Coffea canephora HOM05D006293 ORTHO05D007971 3.5e-73 279.3 300 49.0
TAR536G0014 Trochodendron aralioides HOM05D006293 ORTHO05D007971 8.0e-70 268.1 292 49.7
ATR0810G191 Amborella trichopoda HOM05D006293 ORTHO05D007971 6.8e-69 265.0 282 49.6
Nn1g05912 Nelumbo nucifera HOM05D006293 ORTHO05D007971 1.5e-68 263.8 305 47.2
Cfa005191 Carpinus fangiana HOM05D006293 ORTHO05D007971 5.7e-68 261.9 313 45.0
Haze_02189 Corylus avellana HOM05D006293 ORTHO05D007971 5.7e-68 261.9 313 45.0
TAR628G0693 Trochodendron aralioides HOM05D006293 ORTHO05D007971 9.8e-68 261.2 306 48.0
QL11p047722 Quercus lobata HOM05D006293 ORTHO05D007971 6.3e-67 258.5 321 43.6
GSVIVG01024071001 Vitis vinifera HOM05D006293 ORTHO05D007971 8.3e-67 258.1 308 46.4
Peaxi162Scf00362g00956 Petunia axillaris HOM05D001375 ORTHO05D001222 5.4e-66 255.4 307 45.9
Sopen01g053260 Solanum pennellii HOM05D006293 ORTHO05D007971 7.0e-66 255.0 296 45.6
Solyc01g111210.3 Solanum lycopersicum HOM05D001375 ORTHO05D001222 9.1e-66 254.6 296 45.6
Rhsim11G0188600 Rhododendron simsii HOM05D006293 ORTHO05D007971 1.2e-65 254.2 329 41.9
CiPaw.05G077900 Carya illinoinensis HOM05D006293 ORTHO05D007971 1.6e-65 253.8 292 45.9
SGA_v2.0_scaffold32G13265 Striga asiatica HOM05D006293 ORTHO05D007971 2.7e-65 253.1 296 47.0
MBI05_g07501_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 5.9e-65 251.9 285 47.7
MBI05_g47219_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 7.7e-65 251.5 285 48.1
ClCG02G011620 Citrullus lanatus HOM05D006293 ORTHO05D007971 1.7e-64 250.4 313 45.0
CAN.G588.32 Capsicum annuum HOM05D006293 ORTHO05D007971 3.8e-64 249.2 316 43.7
Gohir.D01G156200 Gossypium hirsutum HOM05D006293 ORTHO05D007971 3.8e-64 249.2 303 46.5
Potri.004G169200 Populus trichocarpa HOM05D006293 ORTHO05D007971 3.8e-64 249.2 307 44.0
Dinv04963 Davidia involucrata HOM05D006293 ORTHO05D007971 8.5e-64 248.1 307 43.3
MBI05_g30117_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 8.5e-64 248.1 289 47.1
Gorai.002G193700 Gossypium raimondii HOM05D006293 ORTHO05D007971 1.5e-63 247.3 303 46.2
Thecc.02G066200 Theobroma cacao HOM05D006293 ORTHO05D007971 1.5e-63 247.3 315 44.8
vmacro02255 Vaccinium macrocarpon HOM05D006293 ORTHO05D007971 1.9e-63 246.9 328 41.5
PGSC0003DMG400001627 Solanum tuberosum HOM05D006293 ORTHO05D007971 2.5e-63 246.5 308 43.8
FAN15G0431 Fragaria x ananassa HOM05D006293 ORTHO05D007971 1.2e-62 244.2 332 41.0
Gohir.A01G164300 Gossypium hirsutum HOM05D006293 ORTHO05D007971 2.1e-62 243.4 301 45.5
Oeu014457.2 Olea europaea HOM05D006293 ORTHO05D007971 2.1e-62 243.4 314 42.7
Manes.11G090800 Manihot esculenta HOM05D006293 ORTHO05D007971 3.6e-62 242.7 310 41.9
RcHm_v2.0_Chr6g0244771 Rosa chinensis HOM05D006293 ORTHO05D007971 4.7e-62 242.3 341 40.2
Sed0004865 Sechium edule HOM05D006293 ORTHO05D007971 1.0e-61 241.1 316 43.7
THA.LOC104804336 Tarenaya hassleriana HOM05D006293 ORTHO05D007971 1.0e-61 241.1 291 46.0
Oeu060421.1 Olea europaea HOM05D006293 ORTHO05D007971 1.4e-61 240.7 313 42.8
Eucgr.G01761 Eucalyptus grandis HOM05D006293 ORTHO05D007971 1.8e-61 240.4 320 42.5
Phvul.009G025500 Phaseolus vulgaris HOM05D006293 ORTHO05D007971 4.0e-61 239.2 308 42.9
VMungo1309G1166 Vigna mungo HOM05D006293 ORTHO05D007971 4.0e-61 239.2 308 42.9
TWI31G0553 Tripterygium wilfordii HOM05D006293 ORTHO05D007971 5.2e-61 238.8 318 43.7
FAN27G2989 Fragaria x ananassa HOM05D006293 ORTHO05D007971 8.8e-61 238.0 348 39.1
Migut.B00115 Erythranthe guttata HOM05D006293 ORTHO05D007971 2.0e-60 236.9 326 42.6
PSO170G2363 Papaver somniferum HOM05D006293 ORTHO05D007971 2.6e-60 236.5 351 41.0
CSS0030950 Camellia sinensis var. sinensis HOM05D006293 ORTHO05D007971 3.4e-60 236.1 312 43.6
Duzib132G0283 Durio zibethinus HOM05D006293 ORTHO05D007971 3.4e-60 236.1 312 43.3
COL.COLO4_17266 Corchorus olitorius HOM05D006293 ORTHO05D007971 5.7e-60 235.3 319 42.9
Medtr3g117760 Medicago truncatula HOM05D006293 ORTHO05D007971 5.7e-60 235.3 276 45.3
Prupe.8G161400 Prunus persica HOM05D006293 ORTHO05D007971 1.7e-59 233.8 319 40.8
Aqoxy5G00988 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 2.2e-59 233.4 291 46.0
Ca_15314_v3 Cicer arietinum L. HOM05D006293 ORTHO05D007971 2.8e-59 233.0 293 43.7
PSO700G0292 Papaver somniferum HOM05D006293 ORTHO05D007971 2.8e-59 233.0 300 43.7
Cpa.g.sc37.182 Carica papaya HOM05D006293 ORTHO05D007971 4.9e-59 232.3 315 42.9
Glyma.06G004900 Glycine max HOM05D006293 ORTHO05D007971 1.1e-58 231.1 306 41.8
Nitab4.5_0000980g0060 Nicotiana tabacum HOM05D001375 ORTHO05D001222 1.8e-58 230.3 301 42.9
Rhsim11G0188500 Rhododendron simsii HOM05D006293 ORTHO05D007971 1.8e-58 230.3 371 36.9
FAN24G1019 Fragaria x ananassa HOM05D006293 ORTHO05D007971 2.4e-58 229.9 356 37.9
Glyma.04G005100 Glycine max HOM05D006293 ORTHO05D007971 5.4e-58 228.8 324 40.4
FvH4_2g01740 Fragaria vesca HOM05D006293 ORTHO05D007971 9.2e-58 228.0 353 37.7
FAN20G1949 Fragaria x ananassa HOM05D006293 ORTHO05D007971 2.0e-57 226.9 354 37.6
Sc14g0002130 Simmondsia chinensis HOM05D006293 ORTHO05D007971 4.5e-57 225.7 310 40.3
MBI05_g48109_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 5.9e-57 225.3 285 45.6
Lj1g0023631 Lotus japonicus HOM05D006293 ORTHO05D007971 1.7e-56 223.8 310 41.9
MD05G1116900 Malus domestica HOM05D006293 ORTHO05D007971 1.7e-56 223.8 331 38.7
Ciclev10028711m.g Citrus clementina HOM05D006293 ORTHO05D007971 2.3e-56 223.4 354 37.0
MSTRG.16884 Avicennia marina HOM05D006293 ORTHO05D007971 2.9e-56 223.0 338 39.9
TPR.G38570 Trifolium pratense HOM05D006293 ORTHO05D007971 2.9e-56 223.0 305 42.6
CANSAT25G1913 Cannabis sativa HOM05D006293 ORTHO05D007971 5.0e-56 222.2 336 37.8
Hund06410 Selenicereus undatus HOM05D006293 ORTHO05D007971 1.1e-55 221.1 330 38.5
HPP92_013009 Vanilla planifolia HOM05D006293 ORTHO05D007971 1.1e-55 221.1 265 47.5
Lalb_Chr23g0265081 Lupinus albus HOM05D006293 ORTHO05D007971 1.9e-55 220.3 308 43.5
DCAR_003705 Daucus carota HOM05D006293 ORTHO05D007971 3.6e-54 216.1 307 40.1
HanXRQChr17g0557851 Helianthus annuus HOM05D006293 ORTHO05D007971 1.4e-53 214.2 316 39.6
Aa31LG8G13900 Aethionema arabicum HOM05D006293 ORTHO05D007971 1.8e-53 213.8 324 39.5
BolC9t54199H Brassica oleracea HOM05D006293 ORTHO05D007971 1.8e-53 213.8 327 40.4
BcaC04g23011 Brassica carinata HOM05D006293 ORTHO05D007971 3.0e-53 213.0 327 40.4
C09p13060 Brassica napus HOM05D006293 ORTHO05D007971 5.2e-53 212.2 327 40.1
BraA07t28238Z Brassica rapa HOM05D006293 ORTHO05D007971 8.9e-53 211.5 335 39.7
Lsat_1_v5_gn_8_126000 Lactuca sativa HOM05D006293 ORTHO05D007971 1.2e-52 211.1 310 40.0
AL3G49260 Arabidopsis lyrata HOM05D006293 ORTHO05D007971 1.5e-52 210.7 289 42.2
AUR62010081 Chenopodium quinoa HOM05D006293 ORTHO05D007971 1.5e-52 210.7 326 37.7
Dinv41970 Davidia involucrata HOM05D006293 ORTHO05D007971 1.5e-52 210.7 244 45.9
BcaC06g36161 Brassica carinata HOM05D006293 ORTHO05D007971 5.7e-52 208.8 335 39.1
A07p04460 Brassica napus HOM05D006293 ORTHO05D007971 5.7e-52 208.8 335 39.4
C07p07090 Brassica napus HOM05D006293 ORTHO05D007971 5.7e-52 208.8 335 39.1
BolC7t41128H Brassica oleracea HOM05D006293 ORTHO05D007971 5.7e-52 208.8 335 39.1
AUR62013075 Chenopodium quinoa HOM05D006293 ORTHO05D007971 3.7e-51 206.1 326 36.8
Psat5g003040 Pisum sativum HOM05D006293 ORTHO05D007971 4.9e-51 205.7 322 39.4
BcaB07g31757 Brassica carinata HOM05D006293 ORTHO05D007971 6.4e-51 205.3 339 38.6
CARHR106850 Cardamine hirsuta HOM05D006293 ORTHO05D007971 6.4e-51 205.3 330 40.0
Lj5C183T16 Lonicera japonica HOM05D006293 ORTHO05D007971 6.4e-51 205.3 326 38.3
BraA09t36749Z Brassica rapa HOM05D006293 ORTHO05D007971 8.3e-51 204.9 333 38.4
Carub.0003s3038 Capsella rubella HOM05D006293 ORTHO05D007971 8.3e-51 204.9 327 38.8
ECA233G0605 Erigeron canadensis HOM05D001375 ORTHO05D001222 1.1e-50 204.5 313 39.0
MELO3C020791.2 Cucumis melo HOM05D006293 ORTHO05D007971 1.8e-50 203.8 320 38.8
A09p11050 Brassica napus HOM05D006293 ORTHO05D007971 5.4e-50 202.2 333 38.1
EL10Ac9g21428 Beta vulgaris HOM05D006293 ORTHO05D007971 2.0e-49 200.3 353 33.7
AT2G16630 Arabidopsis thaliana HOM05D006293 ORTHO05D007971 4.6e-49 199.1 324 38.6
Sp3g30120 Schrenkiella parvula HOM05D006293 ORTHO05D007971 7.8e-49 198.4 363 36.1
Aqoxy1G01171 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 1.7e-48 197.2 260 43.5
Thhalv10022734m.g Eutrema salsugineum HOM05D006293 ORTHO05D007971 8.6e-48 194.9 371 35.0
Ah.01g022670 Amaranthus hybridus HOM05D006293 ORTHO05D007971 7.3e-47 191.8 295 39.0
HanXRQChr10g0298941 Helianthus annuus HOM05D006293 ORTHO05D007971 2.2e-43 180.3 312 36.2
unitig_0.g43 Utricularia gibba HOM05D006293 ORTHO05D007971 2.9e-43 179.9 295 40.0
Ah.01g009070 Amaranthus hybridus HOM05D006293 ORTHO05D007971 4.9e-43 179.1 308 37.3
unitig_0.g827 Utricularia gibba HOM05D006293 ORTHO05D007971 6.4e-43 178.7 317 36.9
CsaV3_2G015780 Cucumis sativus L. HOM05D006293 ORTHO05D007971 1.9e-42 177.2 335 34.3
MBI05_g21530_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 6.6e-40 168.7 204 46.6
SEGI_19356 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 1.2e-36 157.9 325 34.2
SEGI_14996 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 7.5e-36 155.2 316 35.8
Aqoxy6G00177 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 2.1e-33 147.1 289 33.9
MSTRG.20014 Avicennia marina HOM05D006293 ORTHO05D007971 2.5e-31 140.2 165 46.1
BcaB03g16385 Brassica carinata HOM05D006293 ORTHO05D007971 4.3e-31 139.4 263 33.8
Nitab4.5_0000283g0050 Nicotiana tabacum HOM05D001375 ORTHO05D001222 7.3e-31 138.7 289 32.5
PGR042G0330 Punica granatum HOM05D006293 ORTHO05D007971 2.8e-30 136.7 375 28.8
Mapoly0014s0128 Marchantia polymorpha HOM05D006293 ORTHO05D007971 1.1e-29 134.8 313 33.9
MD10G1120000 Malus domestica HOM05D006293 ORTHO05D007971 3.8e-27 126.3 122 50.0
MD10G1120100 Malus domestica HOM05D006293 ORTHO05D007971 6.0e-25 119.0 125 44.8
ECA234G1535 Erigeron canadensis HOM05D001991 ORTHO05D007971 5.1e-24 115.9 158 38.0
Gohir.1Z049391 Gossypium hirsutum HOM05D006293 ORTHO05D007971 9.6e-23 111.7 139 47.5
SMO223G0025 Selaginella moellendorffii HOM05D006293 ORTHO05D007971 1.6e-22 110.9 295 30.2
Pp3c14_8250 Physcomitrium patens HOM05D006293 ORTHO05D007971 3.6e-22 109.8 274 32.5
MBI05_g31848_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.4e-21 107.8 141 40.4
Zm00001eb210030 Zea mays HOM05D006293 ORTHO05D007971 1.8e-21 107.5 141 41.8
Pp3c1_27500 Physcomitrium patens HOM05D006293 ORTHO05D007971 6.9e-21 105.5 273 32.6
Actinidia00600 Actinidia chinensis HOM05D006293 ORTHO05D007971 3.8e-11 73.2 53 60.4
SEGI_23181 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 1.9e-10 70.9 212 29.2
Eucgr.K03259 Eucalyptus grandis HOM05D007363 ORTHO05D009018 2.3e-08 63.9 140 37.9
Eucgr.L02952 Eucalyptus grandis HOM05D007363 ORTHO05D009018 2.3e-08 63.9 140 37.9
Aqoxy4G01086 Aquilegia oxysepala HOM05D003761 ORTHO05D004412 2.1e-06 57.4 125 28.0
SGA_v2.0_scaffold9G04828 Striga asiatica HOM05D006293 ORTHO05D007971 2.8e-06 57.0 52 44.2
DCAR_011012 Daucus carota HOM05D003328 ORTHO05D003722 8.1e-06 55.5 52 48.1


User provided reference genes

Program Settings