Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0881 Ceratophyllum demersum HOM05D004198 ORTHO05D006470 0.0e+00 1260.4 623 100.0
Aqoxy7G04190 Aquilegia oxysepala HOM05D004198 ORTHO05D006470 1.4e-260 902.9 659 68.6
MBI13_g01654_MAGBIO Magnolia biondii HOM05D004198 ORTHO05D006470 8.3e-258 893.6 662 67.8
TAR624G1053 Trochodendron aralioides HOM05D004198 ORTHO05D006470 4.6e-256 887.9 660 67.6
Nn8g38508 Nelumbo nucifera HOM05D004198 ORTHO05D006470 6.0e-256 887.5 658 66.9
vmacro17070 Vaccinium macrocarpon HOM05D004198 ORTHO05D006470 3.0e-255 885.2 659 66.2
Actinidia39606 Actinidia chinensis HOM05D004198 ORTHO05D006470 3.6e-253 878.2 659 66.3
Dinv25493 Davidia involucrata HOM05D004198 ORTHO05D006470 6.2e-253 877.5 662 67.1
Manes.16G088900 Manihot esculenta HOM05D004198 ORTHO05D006470 1.4e-252 876.3 659 65.6
Duzib168G0708 Durio zibethinus HOM05D004198 ORTHO05D006470 3.4e-251 871.7 659 65.7
Duzib150G0139 Durio zibethinus HOM05D004198 ORTHO05D006470 3.7e-250 868.2 659 65.3
Hma1.2p1_0179F.1_g079100 Hydrangea macrophylla HOM05D004198 ORTHO05D006470 1.1e-249 866.7 660 65.9
CiPaw.03G199300 Carya illinoinensis HOM05D004198 ORTHO05D006470 1.9e-249 865.9 657 65.6
Atru.chr7.1797 Acer truncatum HOM05D004198 ORTHO05D006470 3.2e-249 865.1 632 65.8
Gorai.010G094700 Gossypium raimondii HOM05D004198 ORTHO05D006470 3.2e-249 865.1 661 65.5
Actinidia33515 Actinidia chinensis HOM05D004198 ORTHO05D006470 4.1e-249 864.8 665 65.0
TWI63G0842 Tripterygium wilfordii HOM05D004198 ORTHO05D006470 2.1e-248 862.4 659 65.6
GSVIVG01014998001 Vitis vinifera HOM05D004198 ORTHO05D006470 2.1e-248 862.4 659 65.3
Thecc.09G068000 Theobroma cacao HOM05D004198 ORTHO05D006470 2.7e-248 862.1 659 64.6
Haze_26080 Corylus avellana HOM05D004198 ORTHO05D006470 3.5e-248 861.7 669 65.3
Cfa002929 Carpinus fangiana HOM05D004198 ORTHO05D006470 7.8e-248 860.5 662 65.6
FvH4_1g09640 Fragaria vesca HOM05D004198 ORTHO05D006470 1.0e-247 860.1 660 65.0
FAN28G0237 Fragaria x ananassa HOM05D004198 ORTHO05D006470 1.0e-247 860.1 659 65.3
FAN26G2565 Fragaria x ananassa HOM05D004198 ORTHO05D006470 1.3e-247 859.8 660 64.8
Cpa.g.sc82.44 Carica papaya HOM05D004198 ORTHO05D006470 2.3e-247 859.0 660 63.8
FAN19G0627 Fragaria x ananassa HOM05D004198 ORTHO05D006470 2.3e-247 859.0 660 64.8
CANSAT56G1757 Cannabis sativa HOM05D004198 ORTHO05D006470 5.1e-247 857.8 661 64.4
QL11p003422 Quercus lobata HOM05D004198 ORTHO05D006470 5.1e-247 857.8 661 65.1
Cc00_g13770 Coffea canephora HOM05D004198 ORTHO05D006470 1.1e-246 856.7 658 64.4
Gohir.A06G082000 Gossypium hirsutum HOM05D004198 ORTHO05D006470 1.1e-246 856.7 661 64.6
Prupe.7G189800 Prunus persica HOM05D004198 ORTHO05D006470 1.1e-246 856.7 657 64.4
ATR0099G092 Amborella trichopoda HOM05D004198 ORTHO05D006470 7.3e-246 854.0 660 64.8
RcHm_v2.0_Chr2g0096481 Rosa chinensis HOM05D004198 ORTHO05D006470 2.1e-245 852.4 661 65.4
Potri.006G134300 Populus trichocarpa HOM05D004198 ORTHO05D006470 4.0e-244 848.2 662 63.9
Ciclev10007313m.g Citrus clementina HOM05D004198 ORTHO05D006470 4.4e-243 844.7 657 63.3
Sc14g0000910 Simmondsia chinensis HOM05D004198 ORTHO05D006470 5.8e-243 844.3 662 64.4
PSO135G0314 Papaver somniferum HOM05D004198 ORTHO05D006470 9.9e-243 843.6 666 64.1
Oeu021231.1 Olea europaea HOM05D004198 ORTHO05D006470 3.8e-242 841.6 659 64.2
HPP92_009326 Vanilla planifolia HOM05D004198 ORTHO05D006470 3.8e-242 841.6 657 63.0
Rhsim05G0001300 Rhododendron simsii HOM05D004198 ORTHO05D006470 3.2e-241 838.6 736 58.6
Nitab4.5_0001114g0030 Nicotiana tabacum HOM05D004198 ORTHO05D006470 4.2e-241 838.2 657 63.6
Sabra06G0105400 Salix brachista HOM05D004198 ORTHO05D006470 7.1e-241 837.4 725 59.6
Lalb_Chr12g0200381 Lupinus albus HOM05D004198 ORTHO05D006470 9.3e-241 837.0 658 62.6
Glyma.13G115500 Glycine max HOM05D004198 ORTHO05D006470 2.1e-240 835.9 658 63.1
Glyma.17G044300 Glycine max HOM05D004198 ORTHO05D006470 1.3e-239 833.2 658 62.8
MD02G1105300 Malus domestica HOM05D004198 ORTHO05D006470 1.7e-239 832.8 658 62.8
VMungo1215G1653 Vigna mungo HOM05D004198 ORTHO05D006470 1.9e-238 829.3 658 62.5
Lj4g0026986 Lotus japonicus HOM05D004198 ORTHO05D006470 2.5e-238 828.9 658 62.6
THA.LOC104804447 Tarenaya hassleriana HOM05D004198 ORTHO05D006470 2.5e-238 828.9 663 62.0
Eucgr.C03183 Eucalyptus grandis HOM05D004198 ORTHO05D006470 3.3e-238 828.6 663 63.8
Nitab4.5_0000055g0100 Nicotiana tabacum HOM05D004198 ORTHO05D006470 5.6e-238 827.8 657 63.6
Phvul.003G126300 Phaseolus vulgaris HOM05D004198 ORTHO05D006470 7.3e-238 827.4 658 62.6
Sopen07g006460 Solanum pennellii HOM05D004198 ORTHO05D006470 9.6e-238 827.0 656 63.1
ClCG03G014720 Citrullus lanatus HOM05D004198 ORTHO05D006470 1.3e-237 826.6 658 62.8
Medtr4g124470 Medicago truncatula HOM05D004198 ORTHO05D006470 2.8e-237 825.5 664 62.0
MELO3C015556.2 Cucumis melo HOM05D004198 ORTHO05D006470 1.8e-236 822.8 657 62.4
Hund08916 Selenicereus undatus HOM05D004198 ORTHO05D006470 6.9e-236 820.8 665 62.6
Solyc07g017610.3 Solanum lycopersicum HOM05D004198 ORTHO05D006470 6.9e-236 820.8 656 62.7
Migut.J00870 Erythranthe guttata HOM05D004198 ORTHO05D006470 9.0e-236 820.5 660 63.0
Thhalv10024287m.g Eutrema salsugineum HOM05D004198 ORTHO05D006470 9.0e-236 820.5 661 61.3
Sp7g30900 Schrenkiella parvula HOM05D004198 ORTHO05D006470 9.0e-236 820.5 662 61.3
HanXRQChr03g0060011 Helianthus annuus HOM05D004198 ORTHO05D006470 1.5e-235 819.7 657 62.6
PGR044G0871 Punica granatum HOM05D004198 ORTHO05D006470 2.0e-235 819.3 656 63.1
AT4G33150 Arabidopsis thaliana HOM05D004198 ORTHO05D006470 2.6e-235 818.9 661 61.6
BcaC09g52122 Brassica carinata HOM05D004198 ORTHO05D006470 4.4e-235 818.1 659 61.5
EL10Ac8g18953 Beta vulgaris HOM05D004198 ORTHO05D006470 5.8e-235 817.8 661 63.2
Aa31sc786G10 Aethionema arabicum HOM05D004198 ORTHO05D006470 2.9e-234 815.5 687 60.6
Lsat_1_v5_gn_5_138341 Lactuca sativa HOM05D004198 ORTHO05D006470 3.8e-234 815.1 657 62.4
MSTRG.5977 Avicennia marina HOM05D004198 ORTHO05D006470 6.4e-234 814.3 658 63.2
A01p05020 Brassica napus HOM05D004198 ORTHO05D006470 6.4e-234 814.3 661 61.3
C01p05470 Brassica napus HOM05D004198 ORTHO05D006470 8.4e-234 813.9 660 61.4
BolC1t00527H Brassica oleracea HOM05D004198 ORTHO05D006470 1.1e-233 813.5 660 61.2
CsaV3_1G041440 Cucumis sativus L. HOM05D004198 ORTHO05D006470 1.1e-233 813.5 657 61.6
TPR.G12649 Trifolium pratense HOM05D004198 ORTHO05D006470 1.9e-233 812.8 658 61.4
Ah.09g228850 Amaranthus hybridus HOM05D004198 ORTHO05D006470 4.2e-233 811.6 659 62.1
ECA240G2250 Erigeron canadensis HOM05D004198 ORTHO05D006470 4.2e-233 811.6 658 62.3
Psat4g019880 Pisum sativum HOM05D004198 ORTHO05D006470 4.2e-233 811.6 653 61.7
Os02g0783700 Oryza sativa ssp. japonica HOM05D004198 ORTHO05D006470 5.4e-233 811.2 655 62.6
arahy.Tifrunner.gnm1.ann1.Q7P4IG Arachis hypogaea HOM05D004198 ORTHO05D006470 7.1e-233 810.8 660 60.9
arahy.Tifrunner.gnm1.ann1.54PPAU Arachis hypogaea HOM05D004198 ORTHO05D006470 9.3e-233 810.4 660 61.1
MD02G1105000 Malus domestica HOM05D004198 ORTHO05D006470 9.3e-233 810.4 714 58.5
AUR62028335 Chenopodium quinoa HOM05D004198 ORTHO05D006470 1.2e-232 810.1 659 62.5
Sed0024058 Sechium edule HOM05D004198 ORTHO05D006470 1.3e-231 806.6 657 61.3
Carub.0007s0730 Capsella rubella HOM05D004198 ORTHO05D006470 1.7e-231 806.2 660 60.5
AL7G18400 Arabidopsis lyrata HOM05D004198 ORTHO05D006470 2.3e-231 805.8 660 60.6
SalBow6G6057 Salvia bowleyana HOM05D004198 ORTHO05D006470 2.8e-229 798.9 657 62.3
CAN.G86.12 Capsicum annuum HOM05D004198 ORTHO05D006470 9.9e-227 790.4 626 63.3
BraA01t00484Z Brassica rapa HOM05D004198 ORTHO05D006470 2.3e-223 779.2 663 59.3
AUR62025328 Chenopodium quinoa HOM05D004198 ORTHO05D006470 1.8e-220 769.6 659 60.2
PGSC0003DMG401015935 Solanum tuberosum HOM05D004198 ORTHO05D006470 2.4e-220 769.2 519 71.1
Peaxi162Scf00452g00120 Petunia axillaris HOM05D004198 ORTHO05D006470 2.0e-219 766.1 657 60.1
unitig_22.g6576 Utricularia gibba HOM05D004198 ORTHO05D006470 2.0e-219 766.1 652 59.7
CARHR241180 Cardamine hirsuta HOM05D004198 ORTHO05D006470 1.2e-216 756.9 518 68.7
Ca_21348_v3 Cicer arietinum L. HOM05D004198 ORTHO05D006470 6.9e-212 741.1 656 57.5
Gohir.D06G081400 Gossypium hirsutum HOM05D004198 ORTHO05D006470 2.8e-205 719.2 581 63.3
SGA_v2.0_scaffold31G12701 Striga asiatica HOM05D004198 ORTHO05D006470 1.1e-201 707.2 655 56.9
C07p59520 Brassica napus HOM05D004198 ORTHO05D006470 1.2e-195 687.2 448 71.7
CSS0027728 Camellia sinensis var. sinensis HOM05D004198 ORTHO05D006470 2.6e-195 686.0 551 63.5
BolC7t46396H Brassica oleracea HOM05D004198 ORTHO05D006470 4.5e-195 685.3 448 71.0
BraA03t15222Z Brassica rapa HOM05D004198 ORTHO05D006470 4.5e-195 685.3 451 71.6
EL10Ac8g18951 Beta vulgaris HOM05D004198 ORTHO05D006470 2.1e-192 676.4 471 69.6
AL7G18410 Arabidopsis lyrata HOM05D004198 ORTHO05D006470 2.2e-189 666.4 470 66.6
Mapoly0072s0092 Marchantia polymorpha HOM05D004198 ORTHO05D006470 2.6e-187 659.4 659 52.2
Carub.0007s0731 Capsella rubella HOM05D004198 ORTHO05D006470 7.7e-187 657.9 496 64.1
A03p61830 Brassica napus HOM05D004198 ORTHO05D006470 6.1e-184 648.3 448 67.6
Duzib168G0961 Durio zibethinus HOM05D004198 ORTHO05D006470 1.8e-183 646.7 451 68.7
BolC7t46395H Brassica oleracea HOM05D004198 ORTHO05D006470 8.8e-183 644.4 444 68.0
TWI63G0157 Tripterygium wilfordii HOM05D004198 ORTHO05D006470 8.8e-183 644.4 456 66.9
Atru.chr7.1795 Acer truncatum HOM05D004198 ORTHO05D006470 1.7e-178 630.2 449 68.2
SMO145G0289 Selaginella moellendorffii HOM05D004198 ORTHO05D006470 3.8e-178 629.0 633 50.6
BraA03t15221Z Brassica rapa HOM05D004198 ORTHO05D006470 2.1e-168 596.7 458 62.7
Pp3c27_7000 Physcomitrium patens HOM05D004198 ORTHO05D006470 5.7e-166 588.6 639 49.1
PSO135G0878 Papaver somniferum HOM05D004198 ORTHO05D000955 1.6e-163 580.5 448 64.7
C07p59510 Brassica napus HOM05D004198 ORTHO05D006470 3.6e-152 542.7 448 60.3
BcaNung02155 Brassica carinata HOM05D004198 ORTHO05D006470 3.4e-150 536.2 455 58.5
Ciclev10008705m.g Citrus clementina HOM05D004198 ORTHO05D006470 3.3e-145 519.6 366 68.3
Thecc.09G068400 Theobroma cacao HOM05D004198 ORTHO05D006470 1.6e-136 490.7 359 65.2
PSO724G0393 Papaver somniferum HOM05D004198 ORTHO05D006470 1.6e-115 421.0 393 55.2
Lj4A923G18 Lonicera japonica HOM05D004198 ORTHO05D006470 1.1e-113 414.8 238 82.8
A03p61840 Brassica napus HOM05D004198 ORTHO05D006470 5.6e-113 412.5 267 73.8
DCAR_000446 Daucus carota HOM05D004198 ORTHO05D006470 6.7e-106 389.0 286 68.5
Zm00001eb192910 Zea mays HOM05D004198 ORTHO05D006470 4.3e-105 386.3 375 54.7
SEGI_06318 Sequoiadendron giganteum HOM05D004198 ORTHO05D006470 7.1e-100 369.0 241 74.7
PGSC0003DMG400002301 Solanum tuberosum HOM05D004198 ORTHO05D006470 1.0e-98 365.2 271 67.2
FAN26G1461 Fragaria x ananassa HOM05D004198 ORTHO05D006470 1.1e-97 361.7 213 80.8
Sopen07g006480 Solanum pennellii HOM05D004198 ORTHO05D006470 8.2e-96 355.5 237 73.4
Potri.006G134450 Populus trichocarpa HOM05D004198 ORTHO05D006470 4.1e-95 353.2 266 68.0
COL.COLO4_21183 Corchorus olitorius HOM05D004198 ORTHO05D006470 7.9e-91 339.0 555 40.0
Haze_26708 Corylus avellana HOM05D004198 ORTHO05D006470 7.2e-84 315.8 512 36.3
PSO724G0241 Papaver somniferum HOM05D004198 ORTHO05D006470 2.6e-70 270.8 156 81.4
SEGI_08338 Sequoiadendron giganteum HOM05D004198 ORTHO05D006470 2.8e-56 224.2 284 45.1
SEGI_37264 Sequoiadendron giganteum HOM05D004198 ORTHO05D006470 5.9e-46 189.9 156 59.6
RcHm_v2.0_Chr2g0169881 Rosa chinensis HOM05D004198 ORTHO05D006470 5.2e-42 176.8 157 57.3
ATR0721G130 Amborella trichopoda HOM05D004198 ORTHO05D006470 3.4e-41 174.1 121 65.3
RcHm_v2.0_Chr2g0121231 Rosa chinensis HOM05D004198 ORTHO05D006470 7.0e-39 166.4 182 51.1
SEGI_05824 Sequoiadendron giganteum HOM05D004198 ORTHO05D043385 1.1e-28 132.5 84 67.9
Lj4A923T26 Lonicera japonica HOM05D004198 ORTHO05D006470 2.3e-26 124.8 170 42.4
MD02G1105200 Malus domestica HOM05D004198 ORTHO05D006470 5.1e-21 107.1 54 85.2
RcHm_v2.0_Chr2g0121241 Rosa chinensis HOM05D004198 ORTHO05D347069 1.2e-19 102.4 120 47.5
RcHm_v2.0_Chr2g0169891 Rosa chinensis HOM05D004198 ORTHO05D340468 1.5e-17 95.5 120 45.0
EL10Ac4g10130 Beta vulgaris HOM05D001013 ORTHO05D004597 6.4e-16 90.1 69 63.8
EL10Ac4g10158 Beta vulgaris HOM05D001013 ORTHO05D016001 3.5e-14 84.3 56 66.1
CANSAT25G3628 Cannabis sativa HOM05D004198 ORTHO05D043385 7.8e-14 83.2 59 62.7
Atru.ctg794.7 Acer truncatum HOM05D005285 ORTHO05D037890 2.4e-10 71.6 74 48.6
EL10Ac8g19732 Beta vulgaris HOM05D004198 ORTHO05D006470 1.1e-07 62.8 52 59.6
Atru.chr13.2215 Acer truncatum HOM05D005285 ORTHO05D037890 1.4e-07 62.4 74 43.2


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