Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0525 Ceratophyllum demersum HOM05D004199 ORTHO05D005905 0.0e+00 1592.4 854 100.0
CDE01G0057 Ceratophyllum demersum HOM05D004199 ORTHO05D005905 0.0e+00 1336.6 873 84.9
MBI01_g12859_MAGBIO Magnolia biondii HOM05D004199 ORTHO05D005905 2.3e-274 949.1 854 62.3
TAR623G0314 Trochodendron aralioides HOM05D004199 ORTHO05D005905 2.1e-272 942.6 860 64.0
Nn6g35106 Nelumbo nucifera HOM05D004199 ORTHO05D005905 9.7e-257 890.6 873 60.7
Sed0023765 Sechium edule HOM05D004199 ORTHO05D005905 1.4e-252 876.7 941 55.0
CiPaw.16G003100 Carya illinoinensis HOM05D004199 ORTHO05D005905 1.1e-247 860.5 853 58.9
MELO3C012214.2 Cucumis melo HOM05D004199 ORTHO05D005905 1.4e-247 860.1 963 53.7
CsaV3_5G033970 Cucumis sativus L. HOM05D004199 ORTHO05D005905 2.4e-247 859.4 955 53.5
Cfa018630 Carpinus fangiana HOM05D004199 ORTHO05D005905 1.4e-244 850.1 926 56.4
Eucgr.G02350 Eucalyptus grandis HOM05D004199 ORTHO05D005905 1.4e-244 850.1 909 55.6
Eucgr.K00868 Eucalyptus grandis HOM05D004199 ORTHO05D005905 2.1e-243 846.3 949 53.6
ClCG05G023030 Citrullus lanatus HOM05D004199 ORTHO05D005905 4.7e-243 845.1 952 53.5
CSS0043668 Camellia sinensis var. sinensis HOM05D004199 ORTHO05D005905 1.0e-242 844.0 907 55.8
CANSAT56G2350 Cannabis sativa HOM05D004199 ORTHO05D005905 1.4e-239 833.6 896 55.5
MD13G1046700 Malus domestica HOM05D004199 ORTHO05D005905 4.1e-239 832.0 950 53.1
ATR0665G261 Amborella trichopoda HOM05D004199 ORTHO05D005905 7.0e-239 831.2 915 55.0
RcHm_v2.0_Chr4g0435851 Rosa chinensis HOM05D004199 ORTHO05D005905 7.0e-239 831.2 945 53.4
Aqoxy2G01512 Aquilegia oxysepala HOM05D004199 ORTHO05D005905 1.6e-238 830.1 868 56.8
Lj6A766T32 Lonicera japonica HOM05D004199 ORTHO05D005905 1.3e-237 827.0 884 55.7
Manes.04G160500 Manihot esculenta HOM05D004199 ORTHO05D005905 7.2e-236 821.2 870 55.6
COL.COLO4_31201 Corchorus olitorius HOM05D004199 ORTHO05D005905 1.6e-235 820.1 937 53.8
AUR62044199 Chenopodium quinoa HOM05D004199 ORTHO05D005905 8.0e-235 817.8 930 52.4
EL10Ac9g22638 Beta vulgaris HOM05D004199 ORTHO05D005905 3.0e-234 815.8 938 53.3
FAN07G1167 Fragaria x ananassa HOM05D004199 ORTHO05D005905 3.0e-234 815.8 940 52.1
FvH4_4g28100 Fragaria vesca HOM05D004199 ORTHO05D005905 5.2e-234 815.1 949 51.7
FAN12G0509 Fragaria x ananassa HOM05D004199 ORTHO05D005905 1.1e-233 813.9 946 51.9
FAN22G1977 Fragaria x ananassa HOM05D004199 ORTHO05D005905 1.5e-233 813.5 938 51.8
Dinv05796 Davidia involucrata HOM05D004199 ORTHO05D005905 4.4e-233 812.0 859 56.9
Ah.04g153070 Amaranthus hybridus HOM05D004199 ORTHO05D005905 7.5e-233 811.2 937 52.1
MD16G1048400 Malus domestica HOM05D004199 ORTHO05D005905 2.8e-232 809.3 902 53.8
TWI53G1601 Tripterygium wilfordii HOM05D004199 ORTHO05D005905 3.7e-232 808.9 846 57.3
FAN17G3109 Fragaria x ananassa HOM05D004199 ORTHO05D005905 6.3e-232 808.1 863 54.3
THA.LOC104800384 Tarenaya hassleriana HOM05D004199 ORTHO05D005905 3.5e-230 802.4 887 55.9
DCAR_030084 Daucus carota HOM05D004199 ORTHO05D005905 3.8e-229 798.9 879 54.9
PSO801G0529 Papaver somniferum HOM05D004199 ORTHO05D005905 5.0e-229 798.5 936 52.6
Atru.chr6.1864_Atru.chr6.1865 Acer truncatum HOM05D004199 ORTHO05D005905 8.5e-229 797.7 839 55.9
Gohir.A10G057500 Gossypium hirsutum HOM05D004199 ORTHO05D005905 1.5e-228 797.0 947 51.5
PSO339G4136 Papaver somniferum HOM05D004199 ORTHO05D005905 2.5e-228 796.2 860 55.7
vmacro14411 Vaccinium macrocarpon HOM05D004199 ORTHO05D005905 5.5e-228 795.0 960 50.8
Gorai.011G063300 Gossypium raimondii HOM05D004199 ORTHO05D005905 1.2e-227 793.9 947 51.8
Haze_17439 Corylus avellana HOM05D004199 ORTHO05D005905 2.7e-227 792.7 931 53.3
Gohir.D10G059300 Gossypium hirsutum HOM05D004199 ORTHO05D005905 1.4e-226 790.4 947 51.7
Hma1.2p1_0399F.1_g144220 Hydrangea macrophylla HOM05D004199 ORTHO05D005905 6.8e-226 788.1 857 54.0
SEGI_39962 Sequoiadendron giganteum HOM05D004199 ORTHO05D005905 5.7e-225 785.0 957 50.8
Ciclev10014191m.g Citrus clementina HOM05D004199 ORTHO05D005905 5.4e-223 778.5 870 54.8
Ca_25946_v3 Cicer arietinum L. HOM05D004199 ORTHO05D005905 1.6e-222 776.9 945 50.4
EL10Ac8g19592 Beta vulgaris HOM05D004199 ORTHO05D005905 7.7e-222 774.6 938 51.8
Hma1.2p1_2265F.1_g318400 Hydrangea macrophylla HOM05D004199 ORTHO05D005905 2.5e-220 769.6 857 53.6
SGA_v2.0_scaffold14G06820 Striga asiatica HOM05D004199 ORTHO05D005905 4.2e-220 768.8 950 49.2
Psat2g189000 Pisum sativum HOM05D004199 ORTHO05D005905 1.6e-219 766.9 932 50.4
Cc11_g10620 Coffea canephora HOM05D004199 ORTHO05D005905 2.1e-219 766.5 911 52.9
Sc17g0004690 Simmondsia chinensis HOM05D004199 ORTHO05D005905 6.1e-219 765.0 868 53.9
Lsat_1_v5_gn_4_1641 Lactuca sativa HOM05D004199 ORTHO05D005905 4.0e-218 762.3 889 53.0
Aa31LG3G17980 Aethionema arabicum HOM05D004199 ORTHO05D005905 2.0e-217 760.0 872 52.6
Glyma.07G227400 Glycine max HOM05D004199 ORTHO05D005905 5.7e-217 758.4 929 49.8
Phvul.001G030200 Phaseolus vulgaris HOM05D004199 ORTHO05D005905 6.3e-216 755.0 918 50.0
HPP92_022758 Vanilla planifolia HOM05D004199 ORTHO05D005905 6.3e-216 755.0 930 50.5
Thecc.10G125100 Theobroma cacao HOM05D004199 ORTHO05D005905 1.4e-215 753.8 883 52.7
Glyma.20G028100 Glycine max HOM05D004199 ORTHO05D005905 1.2e-214 750.7 889 51.1
Glyma.07G155300 Glycine max HOM05D004199 ORTHO05D005905 2.0e-214 750.0 921 50.1
Potri.008G002600 Populus trichocarpa HOM05D004199 ORTHO05D005905 2.7e-214 749.6 891 51.4
CAN.G184.89 Capsicum annuum HOM05D004199 ORTHO05D005905 5.9e-214 748.4 904 51.3
VMungo1383G0908 Vigna mungo HOM05D004199 ORTHO05D005905 1.7e-213 746.9 921 49.8
Rhsim03G0238800 Rhododendron simsii HOM05D004199 ORTHO05D005905 2.3e-213 746.5 943 49.1
Sabra08G0000600 Salix brachista HOM05D004199 ORTHO05D005905 2.3e-213 746.5 925 51.5
Sopen05g005660 Solanum pennellii HOM05D004199 ORTHO05D005905 8.6e-213 744.6 866 51.7
Nitab4.5_0004122g0060 Nicotiana tabacum HOM05D004199 ORTHO05D005905 1.9e-212 743.4 956 49.3
Peaxi162Scf00102g00927 Petunia axillaris HOM05D004199 ORTHO05D005905 3.3e-212 742.7 859 52.5
HanXRQChr17g0568011 Helianthus annuus HOM05D004199 ORTHO05D005905 8.0e-211 738.0 800 53.4
Lalb_Chr10g0099721 Lupinus albus HOM05D004199 ORTHO05D005905 1.4e-210 737.3 861 51.9
PGSC0003DMG400000826 Solanum tuberosum HOM05D004199 ORTHO05D005905 1.8e-210 736.9 864 51.2
Lj3g0002767 Lotus japonicus HOM05D004199 ORTHO05D005905 3.0e-210 736.1 889 49.4
Prupe.1G305200 Prunus persica HOM05D004199 ORTHO05D005905 3.0e-210 736.1 954 48.8
ECA234G0057 Erigeron canadensis HOM05D004199 ORTHO05D005905 1.2e-209 734.2 884 51.6
Medtr5g007520 Medicago truncatula HOM05D004199 ORTHO05D005905 4.6e-206 722.2 922 48.5
Nitab4.5_0011513g0020 Nicotiana tabacum HOM05D004199 ORTHO05D005905 2.1e-203 713.4 984 47.6
A03p03960 Brassica napus HOM05D004199 ORTHO05D005905 3.1e-202 709.5 887 49.5
arahy.Tifrunner.gnm1.ann1.9AQU5H Arachis hypogaea HOM05D004199 ORTHO05D005905 9.8e-201 704.5 949 47.9
Hma1.2p1_0592F.1_g185323 Hydrangea macrophylla HOM05D004199 ORTHO05D005905 6.4e-200 701.8 792 53.0
CARHR204430 Cardamine hirsuta HOM05D004199 ORTHO05D005905 4.1e-199 699.1 929 50.6
BraA03t09739Z Brassica rapa HOM05D004199 ORTHO05D005905 7.0e-199 698.4 916 48.0
Thhalv10012615m.g Eutrema salsugineum HOM05D004199 ORTHO05D005905 6.0e-198 695.3 863 50.2
A10p28170 Brassica napus HOM05D004199 ORTHO05D005905 1.3e-197 694.1 938 47.0
BraA10t44866Z Brassica rapa HOM05D004199 ORTHO05D005905 1.3e-197 694.1 938 47.0
unitig_22.g6876 Utricularia gibba HOM05D004199 ORTHO05D005905 1.7e-197 693.7 968 46.7
Migut.E00297 Erythranthe guttata HOM05D004199 ORTHO05D005905 3.9e-197 692.6 851 49.2
arahy.Tifrunner.gnm1.ann1.P5TZTU Arachis hypogaea HOM05D004199 ORTHO05D005905 6.6e-197 691.8 971 46.9
BcaB08g37246 Brassica carinata HOM05D004199 ORTHO05D005905 2.5e-196 689.9 945 47.8
Duzib235G0865 Durio zibethinus HOM05D004199 ORTHO05D005905 3.3e-196 689.5 887 49.9
TPR.G37944 Trifolium pratense HOM05D004199 ORTHO05D005905 1.2e-195 687.6 785 51.1
C09p68380 Brassica napus HOM05D004199 ORTHO05D005905 1.6e-195 687.2 939 47.5
Lalb_Chr04g0254951 Lupinus albus HOM05D004199 ORTHO05D005905 4.7e-195 685.6 944 46.3
Aqoxy6G00799 Aquilegia oxysepala HOM05D004199 ORTHO05D005905 1.4e-194 684.1 836 49.8
BolC9t59585H Brassica oleracea HOM05D004199 ORTHO05D005905 2.6e-193 679.9 939 47.2
AT5G08550 Arabidopsis thaliana HOM05D004199 ORTHO05D005905 2.2e-192 676.8 937 47.6
AL6G19260 Arabidopsis lyrata HOM05D004199 ORTHO05D005905 1.9e-191 673.7 938 47.5
Carub.0006s0751 Capsella rubella HOM05D004199 ORTHO05D005905 2.8e-187 659.8 942 45.9
C03p04430 Brassica napus HOM05D004199 ORTHO05D005905 8.9e-186 654.8 917 45.5
BcaB01g05585 Brassica carinata HOM05D004199 ORTHO05D005905 1.4e-183 647.5 842 48.1
BolC3t12974H Brassica oleracea HOM05D004199 ORTHO05D005905 4.6e-182 642.5 917 44.9
AagrBONN_evm.TU.Sc2ySwM_228.4147 Anthoceros agrestis HOM05D004199 ORTHO05D005905 3.0e-181 639.8 905 45.5
Os03g0853700 Oryza sativa ssp. japonica HOM05D004199 ORTHO05D005905 2.8e-179 633.3 981 43.4
Sp6g34340 Schrenkiella parvula HOM05D004199 ORTHO05D005905 4.7e-179 632.5 872 46.8
AagrBONN_evm.TU.Sc2ySwM_368.435 Anthoceros agrestis HOM05D004199 ORTHO05D005905 2.5e-172 610.1 904 44.4
Pp3c5_20240 Physcomitrium patens HOM05D004199 ORTHO05D005905 1.1e-170 604.7 877 43.1
Zm00001eb064800 Zea mays HOM05D004199 ORTHO05D005905 1.8e-170 604.0 992 42.4
Solyc05g009850.4 Solanum lycopersicum HOM05D004199 ORTHO05D005905 4.0e-170 602.8 566 57.4
Mapoly0131s0026 Marchantia polymorpha HOM05D004199 ORTHO05D005905 3.9e-165 586.3 899 43.6
GSVIVG01011956001 Vitis vinifera HOM05D004199 ORTHO05D005905 3.7e-163 579.7 484 63.6
Actinidia38395 Actinidia chinensis HOM05D004199 ORTHO05D005905 8.1e-163 578.6 706 49.6
AUR62042759 Chenopodium quinoa HOM05D004199 ORTHO05D005905 5.8e-153 545.8 447 63.1
SMO259G0010 Selaginella moellendorffii HOM05D004199 ORTHO05D005905 6.7e-149 532.3 819 41.0
Oeu041359.1 Olea europaea HOM05D004199 ORTHO05D005905 1.4e-138 498.0 478 56.7
CBR_g46838 Chara braunii HOM05D004199 ORTHO05D005905 4.2e-127 459.9 932 36.8
Rhsim01G0212500 Rhododendron simsii HOM05D004199 ORTHO05D005905 6.3e-115 419.5 466 51.7
Nitab4.5_0007631g0010 Nicotiana tabacum HOM05D004199 ORTHO05D005905 3.7e-91 340.5 432 48.4
AT5G09210 Arabidopsis thaliana HOM05D004199 ORTHO05D005905 1.0e-88 332.4 311 55.6
Zm00001eb177730 Zea mays HOM05D004199 ORTHO05D005905 6.8e-77 293.1 393 46.3
Zm00001eb381810 Zea mays HOM05D004199 ORTHO05D005905 1.5e-76 292.0 384 47.4
GSVIVG01011955001 Vitis vinifera HOM05D004199 ORTHO05D005905 7.8e-73 279.6 363 52.9
Glyma.18G205900 Glycine max HOM05D004199 ORTHO05D005905 4.3e-71 273.9 290 49.7
QL01p046262 Quercus lobata HOM05D004199 ORTHO05D005905 7.3e-71 273.1 396 48.0
CARHR203800 Cardamine hirsuta HOM05D004199 ORTHO05D005905 2.4e-69 268.1 263 55.5
Oeu041360.1 Olea europaea HOM05D004199 ORTHO05D005905 9.9e-68 262.7 462 42.9
Zm00001eb323900 Zea mays HOM05D004199 ORTHO05D005905 1.6e-65 255.4 315 49.5
AUR62033048 Chenopodium quinoa HOM05D004199 ORTHO05D005905 1.3e-59 235.7 392 44.9
MCO14G506 Micromonas commoda HOM05D004199 ORTHO05D005905 1.7e-59 235.3 563 28.6
Cre06.g269350 Chlamydomonas reinhardtii HOM05D004199 ORTHO05D005905 1.5e-55 222.2 1025 24.2
Actinidia13676 Actinidia chinensis HOM05D004199 ORTHO05D005905 3.4e-52 211.1 171 60.2
EL10Ac6g14565 Beta vulgaris HOM05D004199 ORTHO05D005905 9.9e-52 209.5 168 58.9
Actinidia13675 Actinidia chinensis HOM05D004199 ORTHO05D005905 1.6e-46 192.2 443 41.3
Cpa.g.sc221.8 Carica papaya HOM05D004199 ORTHO05D005905 7.9e-41 173.3 345 42.9
EL10Ac6g13882 Beta vulgaris HOM05D004199 ORTHO05D005905 3.8e-27 127.9 93 62.4
Nitab4.5_0000520g0050 Nicotiana tabacum HOM05D004199 ORTHO05D005905 2.8e-22 111.7 197 42.1
CARHR069330 Cardamine hirsuta HOM05D004199 ORTHO05D005905 2.6e-20 105.1 88 56.8
AagrBONN_evm.TU.Sc2ySwM_368.450 Anthoceros agrestis HOM05D004199 ORTHO05D005905 5.9e-20 104.0 86 53.5
Thecc.06G064500 Theobroma cacao HOM05D004199 ORTHO05D005905 1.9e-18 99.0 77 62.3
Potri.006G020200 Populus trichocarpa HOM05D004199 ORTHO05D005905 1.1e-15 89.7 151 44.4
Potri.006G020400 Populus trichocarpa HOM05D004199 ORTHO05D005905 7.4e-15 87.0 151 43.7
Cpa.g.sc221.6 Carica papaya HOM05D004199 ORTHO05D005905 4.1e-13 81.3 66 66.7
CARHR069340 Cardamine hirsuta HOM05D004199 ORTHO05D005905 7.0e-13 80.5 75 57.3
COL.COLO4_28252 Corchorus olitorius HOM05D004199 ORTHO05D025158 4.7e-09 67.8 88 48.9
COL.COLO4_32069 Corchorus olitorius HOM05D004199 ORTHO05D025158 4.7e-09 67.8 88 45.5
CARHR147400 Cardamine hirsuta HOM05D004199 ORTHO05D005905 6.7e-08 63.9 129 30.2
Aqoxy5G02943 Aquilegia oxysepala HOM05D004199 ORTHO05D077991 5.7e-07 60.8 40 60.0
AagrBONN_evm.TU.Sc2ySwM_368.453 Anthoceros agrestis HOM05D030179 ORTHO05D026588 1.3e-06 59.7 49 53.1


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