Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G0315 Ceratophyllum demersum HOM05D002908 ORTHO05D007390 1.3e-199 699.5 347 100.0
MBI04_g14938_MAGBIO Magnolia biondii HOM05D002908 ORTHO05D007390 1.7e-151 539.7 341 78.3
TAR624G0208 Trochodendron aralioides HOM05D002908 ORTHO05D007390 6.5e-151 537.7 337 78.6
Aqoxy7G01537 Aquilegia oxysepala HOM05D002908 ORTHO05D007390 1.9e-150 536.2 345 75.7
Dinv30470 Davidia involucrata HOM05D002908 ORTHO05D007390 4.6e-149 531.6 342 75.7
Thecc.06G094700 Theobroma cacao HOM05D002908 ORTHO05D007390 1.8e-148 529.6 326 75.8
TWI18G0563 Tripterygium wilfordii HOM05D002908 ORTHO05D007390 2.3e-148 529.3 323 77.7
Manes.04G131100 Manihot esculenta HOM05D002908 ORTHO05D007390 5.1e-148 528.1 331 76.1
GSVIVG01017049001 Vitis vinifera HOM05D002908 ORTHO05D007390 1.9e-147 526.2 335 73.7
Ciclev10026026m.g Citrus clementina HOM05D002908 ORTHO05D007390 3.3e-147 525.4 323 77.4
Potri.003G051500 Populus trichocarpa HOM05D002908 ORTHO05D007390 5.7e-147 524.6 325 76.9
Duzib235G0543 Durio zibethinus HOM05D002908 ORTHO05D007390 9.7e-147 523.9 324 75.6
CSS0023180 Camellia sinensis var. sinensis HOM05D002908 ORTHO05D007390 1.6e-146 523.1 319 77.4
COL.COLO4_30459 Corchorus olitorius HOM05D002908 ORTHO05D007390 3.7e-146 521.9 324 75.9
AUR62011685 Chenopodium quinoa HOM05D002908 ORTHO05D007390 4.8e-146 521.5 336 75.9
Gorai.010G229600 Gossypium raimondii HOM05D002908 ORTHO05D007390 4.8e-146 521.5 324 75.6
Oeu000462.1 Olea europaea HOM05D002908 ORTHO05D007390 4.8e-146 521.5 341 74.2
CANSAT56G3591 Cannabis sativa HOM05D002908 ORTHO05D007390 8.2e-146 520.8 331 76.4
Nn2g11662 Nelumbo nucifera HOM05D002908 ORTHO05D007390 8.2e-146 520.8 343 76.1
Sc15g0002180 Simmondsia chinensis HOM05D002908 ORTHO05D007390 8.2e-146 520.8 336 74.7
Actinidia32717 Actinidia chinensis HOM05D002908 ORTHO05D007390 1.8e-145 519.6 353 71.7
vmacro18877 Vaccinium macrocarpon HOM05D002908 ORTHO05D007390 1.8e-145 519.6 321 76.0
EL10Ac9g22051 Beta vulgaris HOM05D002908 ORTHO05D007390 2.4e-145 519.2 337 74.2
MD17G1189500 Malus domestica HOM05D002908 ORTHO05D007390 2.4e-145 519.2 327 75.5
MD09G1208200 Malus domestica HOM05D002908 ORTHO05D007390 4.1e-145 518.5 327 74.9
Manes.11G036900 Manihot esculenta HOM05D002908 ORTHO05D007390 4.1e-145 518.5 331 75.5
HanXRQChr12g0360831 Helianthus annuus HOM05D002908 ORTHO05D007390 5.3e-145 518.1 338 74.3
QL05p021375 Quercus lobata HOM05D002908 ORTHO05D007390 6.9e-145 517.7 334 74.6
Potri.001G186000 Populus trichocarpa HOM05D002908 ORTHO05D007390 9.0e-145 517.3 330 76.7
TAR636G3411 Trochodendron aralioides HOM05D002908 ORTHO05D007390 1.2e-144 516.9 336 75.6
Atru.chr1.3416 Acer truncatum HOM05D002908 ORTHO05D007390 1.5e-144 516.5 321 75.7
Gorai.011G073300 Gossypium raimondii HOM05D002908 ORTHO05D007390 2.0e-144 516.2 332 74.1
Cfa002106 Carpinus fangiana HOM05D002908 ORTHO05D007390 4.5e-144 515.0 320 77.5
Duzib192G0943 Durio zibethinus HOM05D002908 ORTHO05D007390 7.7e-144 514.2 324 74.1
Nitab4.5_0009963g0020 Nicotiana tabacum HOM05D002908 ORTHO05D007390 7.7e-144 514.2 344 71.5
Cc06_g20260 Coffea canephora HOM05D002908 ORTHO05D007390 1.3e-143 513.5 321 75.1
HPP92_002914 Vanilla planifolia HOM05D002908 ORTHO05D007390 1.7e-143 513.1 335 74.0
Peaxi162Scf00015g00145 Petunia axillaris HOM05D002908 ORTHO05D007390 3.8e-143 511.9 347 70.3
MSTRG.4742 Avicennia marina HOM05D002908 ORTHO05D007390 5.0e-143 511.5 342 72.5
CAN.G1152.12 Capsicum annuum HOM05D002908 ORTHO05D007390 5.0e-143 511.5 319 75.5
Lsat_1_v5_gn_5_131021 Lactuca sativa HOM05D002908 ORTHO05D007390 1.1e-142 510.4 346 70.8
PGR102G0394 Punica granatum HOM05D002908 ORTHO05D007390 1.1e-142 510.4 323 75.9
Glyma.08G203400 Glycine max HOM05D002908 ORTHO05D007390 1.4e-142 510.0 324 75.0
Migut.D01011 Erythranthe guttata HOM05D002908 ORTHO05D007390 1.9e-142 509.6 319 76.5
FAN02G4032 Fragaria x ananassa HOM05D002908 ORTHO05D007390 1.9e-142 509.6 333 74.5
Eucgr.J02953 Eucalyptus grandis HOM05D002908 ORTHO05D007390 5.5e-142 508.1 318 76.4
FvH4_6g31910 Fragaria vesca HOM05D002908 ORTHO05D007390 7.2e-142 507.7 330 75.2
FAN14G2394 Fragaria x ananassa HOM05D002908 ORTHO05D007390 7.2e-142 507.7 330 75.2
Lalb_Chr01g0013051 Lupinus albus HOM05D002908 ORTHO05D007390 7.2e-142 507.7 324 75.3
Phvul.010G147500 Phaseolus vulgaris HOM05D002908 ORTHO05D007390 7.2e-142 507.7 324 75.0
Ca_11526_v3 Cicer arietinum L. HOM05D002908 ORTHO05D007390 9.4e-142 507.3 321 76.0
HanXRQChr04g0096211 Helianthus annuus HOM05D002908 ORTHO05D007390 9.4e-142 507.3 344 72.4
VMungo0331G0294 Vigna mungo HOM05D002908 ORTHO05D007390 9.4e-142 507.3 323 75.2
Actinidia21691 Actinidia chinensis HOM05D002908 ORTHO05D007390 1.6e-141 506.5 328 75.9
ECA234G0421 Erigeron canadensis HOM05D002908 ORTHO05D007390 1.6e-141 506.5 320 75.6
Sabra03G0027500 Salix brachista HOM05D002908 ORTHO05D007390 2.1e-141 506.1 352 70.2
Os05g0275700 Oryza sativa ssp. japonica HOM05D002908 ORTHO05D007390 2.7e-141 505.8 329 74.2
RcHm_v2.0_Chr2g0139271 Rosa chinensis HOM05D002908 ORTHO05D007390 2.7e-141 505.8 323 76.5
Medtr8g013660 Medicago truncatula HOM05D002908 ORTHO05D007390 3.6e-141 505.4 323 75.2
FAN09G2740 Fragaria x ananassa HOM05D002908 ORTHO05D007390 6.1e-141 504.6 333 74.2
Sopen06g024840 Solanum pennellii HOM05D002908 ORTHO05D007390 6.1e-141 504.6 322 74.2
Solyc06g066570.4 Solanum lycopersicum HOM05D002908 ORTHO05D007390 7.9e-141 504.2 322 74.2
Glyma.07G018400 Glycine max HOM05D002908 ORTHO05D007390 1.4e-140 503.4 326 74.5
PGSC0003DMG400016501 Solanum tuberosum HOM05D002908 ORTHO05D007390 1.4e-140 503.4 322 74.2
PSO566G0119 Papaver somniferum HOM05D002908 ORTHO05D007390 2.3e-140 502.7 328 75.0
SGA_v2.0_scaffold68G22970 Striga asiatica HOM05D002908 ORTHO05D007390 2.3e-140 502.7 321 74.5
arahy.Tifrunner.gnm1.ann1.E6TYPI Arachis hypogaea HOM05D002908 ORTHO05D007390 3.0e-140 502.3 323 74.3
PSO782G2745 Papaver somniferum HOM05D002908 ORTHO05D007390 5.1e-140 501.5 328 74.7
arahy.Tifrunner.gnm1.ann1.0NGS5F Arachis hypogaea HOM05D002908 ORTHO05D007390 8.8e-140 500.7 321 74.5
SGA_v2.0_scaffold4G02012 Striga asiatica HOM05D002908 ORTHO05D007390 1.1e-139 500.4 341 70.4
Sed0011260 Sechium edule HOM05D002908 ORTHO05D007390 2.0e-139 499.6 318 75.5
ClCG07G013190 Citrullus lanatus HOM05D002908 ORTHO05D007390 3.3e-139 498.8 318 75.2
TPR.G14821 Trifolium pratense HOM05D002908 ORTHO05D007390 3.3e-139 498.8 323 74.6
CsaV3_3G023830 Cucumis sativus L. HOM05D002908 ORTHO05D007390 1.3e-138 496.9 318 74.5
THA.LOC104813553 Tarenaya hassleriana HOM05D002908 ORTHO05D007390 2.2e-138 496.1 321 72.9
MELO3C012977.2 Cucumis melo HOM05D002908 ORTHO05D007390 8.2e-138 494.2 318 74.2
Nitab4.5_0000351g0020 Nicotiana tabacum HOM05D002908 ORTHO05D007390 1.4e-137 493.4 342 69.6
Sp5g35950 Schrenkiella parvula HOM05D002908 ORTHO05D007390 2.0e-136 489.6 325 71.4
CARHR074760 Cardamine hirsuta HOM05D002908 ORTHO05D007390 4.5e-136 488.4 325 71.4
AT1G79810 Arabidopsis thaliana HOM05D002908 ORTHO05D007390 1.0e-135 487.3 329 70.8
AL2G41740 Arabidopsis lyrata HOM05D002908 ORTHO05D007390 6.5e-135 484.6 325 71.4
Rhsim08G0224800 Rhododendron simsii HOM05D002908 ORTHO05D007390 8.5e-135 484.2 348 69.5
A07p26340 Brassica napus HOM05D002908 ORTHO05D007390 1.4e-134 483.4 326 70.6
BraA07t30278Z Brassica rapa HOM05D002908 ORTHO05D007390 1.9e-134 483.0 326 70.6
Carub.0002s2769 Capsella rubella HOM05D002908 ORTHO05D007390 5.5e-134 481.5 325 71.1
BolC6t38042H Brassica oleracea HOM05D002908 ORTHO05D007390 7.9e-133 477.6 326 69.9
C06p28730 Brassica napus HOM05D002908 ORTHO05D007390 3.0e-132 475.7 323 70.3
unitig_736.g22790 Utricularia gibba HOM05D002908 ORTHO05D007390 3.9e-132 475.3 346 67.9
Thhalv10018845m.g Eutrema salsugineum HOM05D002908 ORTHO05D007390 6.7e-132 474.6 326 69.9
AUR62016511 Chenopodium quinoa HOM05D002908 ORTHO05D007390 8.8e-132 474.2 294 79.9
Hund00658 Selenicereus undatus HOM05D002908 ORTHO05D007390 8.8e-132 474.2 337 67.4
ATR0315G165 Amborella trichopoda HOM05D002908 ORTHO05D007390 1.3e-130 470.3 324 70.1
Lj5C318G10 Lonicera japonica HOM05D002908 ORTHO05D007390 1.7e-130 469.9 310 74.8
Zm00001eb031430 Zea mays HOM05D002908 ORTHO05D007390 4.5e-128 461.8 299 74.9
Hund06642 Selenicereus undatus HOM05D002908 ORTHO05D007390 6.5e-127 458.0 302 74.5
Haze_16343 Corylus avellana HOM05D002908 ORTHO05D007390 1.4e-126 456.8 289 77.5
Aa31LG4G20 Aethionema arabicum HOM05D002908 ORTHO05D007390 1.9e-126 456.4 351 63.0
Lj3g0013088 Lotus japonicus HOM05D002908 ORTHO05D007390 7.4e-123 444.5 291 73.5
Sabra01G0154100 Salix brachista HOM05D002908 ORTHO05D007390 9.7e-123 444.1 319 71.8
Gohir.D06G197300 Gossypium hirsutum HOM05D002908 ORTHO05D007390 9.4e-118 427.6 257 77.0
Gohir.A06G188700 Gossypium hirsutum HOM05D002908 ORTHO05D007390 4.7e-117 425.2 257 76.7
SalBow7G1474 Salvia bowleyana HOM05D002908 ORTHO05D007390 8.0e-117 424.5 363 62.0
DCAR_026336 Daucus carota HOM05D002908 ORTHO05D007390 8.8e-116 421.0 348 62.4
Prupe.3G064400 Prunus persica HOM05D002908 ORTHO05D007390 1.2e-115 420.6 254 78.3
CiPaw.02G148100 Carya illinoinensis HOM05D002908 ORTHO05D007390 1.0e-111 407.5 255 76.1
Lsat_1_v5_gn_1_35361 Lactuca sativa HOM05D002908 ORTHO05D007390 1.0e-111 407.5 272 74.3
Gohir.D10G068700 Gossypium hirsutum HOM05D002908 ORTHO05D007390 9.8e-107 391.0 255 73.3
Pp3c3_18540 Physcomitrium patens HOM05D002908 ORTHO05D007390 1.4e-105 387.1 331 57.7
Mapoly0052s0120 Marchantia polymorpha HOM05D002908 ORTHO05D007390 1.7e-103 380.2 325 57.8
SMO146G0339 Selaginella moellendorffii HOM05D002908 ORTHO05D007390 1.4e-100 370.5 332 56.3
Dinv38008 Davidia involucrata HOM05D002908 ORTHO05D007390 6.8e-100 368.2 229 78.6
CiPaw.01G234600 Carya illinoinensis HOM05D002908 ORTHO05D007390 1.1e-97 360.9 228 74.6
CBR_g960 Chara braunii HOM05D002908 ORTHO05D007390 1.1e-81 307.8 297 53.5
Cpa.g.sc109.47 Carica papaya HOM05D002908 ORTHO05D007390 3.4e-75 286.2 166 84.3
Gohir.A10G083732 Gossypium hirsutum HOM05D002908 ORTHO05D007390 4.6e-72 275.8 184 71.7
SEGI_14821 Sequoiadendron giganteum HOM05D002908 ORTHO05D007390 1.3e-71 274.2 209 63.6
Lalb_Chr25g0280041 Lupinus albus HOM05D002908 ORTHO05D007390 6.6e-71 271.9 277 55.2
AagrBONN_evm.TU.Sc2ySwM_228.2361 Anthoceros agrestis HOM05D002908 ORTHO05D007390 2.3e-63 246.9 206 59.2
Psat4g199400 Pisum sativum HOM05D002908 ORTHO05D007390 4.4e-59 232.6 141 78.0
Sed0019299 Sechium edule HOM05D002908 ORTHO05D007390 1.4e-52 211.1 210 54.3
MCO16G131 Micromonas commoda HOM05D002908 ORTHO05D007390 8.4e-50 201.8 328 35.1
PGSC0003DMG400002631 Solanum tuberosum HOM05D002908 ORTHO05D007390 6.7e-47 192.2 323 39.9
Cre17.g698800 Chlamydomonas reinhardtii HOM05D002908 ORTHO05D007390 2.4e-44 183.7 344 35.8
Solyc03g120520.2 Solanum lycopersicum HOM05D002908 ORTHO05D007390 2.9e-42 176.8 237 42.6
Lsat_1_v5_gn_1_85060 Lactuca sativa HOM05D002908 ORTHO05D007390 4.9e-42 176.0 195 49.7
CAN.G438.36 Capsicum annuum HOM05D002908 ORTHO05D007390 2.5e-38 163.7 114 71.1
SEGI_00949 Sequoiadendron giganteum HOM05D002908 ORTHO05D007390 2.8e-37 160.2 122 64.8
PRCOL_00006980 Prasinoderma coloniale HOM05D000198 ORTHO05D003232 1.2e-35 154.8 318 34.9
Lj5C56G8 Lonicera japonica HOM05D002908 ORTHO05D007390 3.2e-33 146.7 227 45.8
Rhsim02G0192800 Rhododendron simsii HOM05D002908 ORTHO05D004240 2.2e-21 107.5 57 89.5
Sopen00g008760 Solanum pennellii HOM05D002908 ORTHO05D007390 3.6e-16 90.1 98 51.0
Medtr7g090350 Medicago truncatula HOM05D002908 ORTHO05D007390 4.7e-16 89.7 248 30.2
Rhsim03G0241200 Rhododendron simsii HOM05D002908 ORTHO05D050692 1.0e-10 72.0 45 75.6
Lsat_1_v5_gn_3_20480 Lactuca sativa HOM05D001398 ORTHO05D011740 1.3e-10 71.6 78 50.0
Rhsim12G0105800 Rhododendron simsii HOM05D002908 ORTHO05D340239 2.5e-09 67.4 55 60.0
Nn3g18125 Nelumbo nucifera HOM05D002908 ORTHO05D007390 1.1e-06 58.5 41 73.2
Nitab4.5_0016721g0010 Nicotiana tabacum HOM05D002908 ORTHO05D283189 9.7e-06 55.5 78 44.9


User provided reference genes

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