Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1815 Ceratophyllum demersum HOM05D006696 ORTHO05D008683 0.0e+00 1399.4 682 100.0
Nn6g34076 Nelumbo nucifera HOM05D006696 ORTHO05D008683 6.5e-256 887.5 578 71.5
TAR629G0060 Trochodendron aralioides HOM05D006696 ORTHO05D008683 1.6e-249 866.3 578 70.8
MBI12_g20403_MAGBIO Magnolia biondii HOM05D006696 ORTHO05D008683 2.8e-246 855.5 580 71.9
Hma1.2p1_0301F.1_g118560 Hydrangea macrophylla HOM05D006696 ORTHO05D008683 3.7e-243 845.1 578 69.0
Aqoxy7G00691 Aquilegia oxysepala HOM05D006696 ORTHO05D008683 7.0e-242 840.9 587 69.0
COL.COLO4_24599 Corchorus olitorius HOM05D006696 ORTHO05D008683 8.6e-240 833.9 599 67.6
Thecc.08G173400 Theobroma cacao HOM05D006696 ORTHO05D008683 2.5e-239 832.4 588 68.5
Manes.01G267400 Manihot esculenta HOM05D006696 ORTHO05D008683 4.0e-237 825.1 588 66.8
Atru.chr5.281 Acer truncatum HOM05D006696 ORTHO05D008683 2.6e-236 822.4 617 64.2
Medtr4g025130 Medicago truncatula HOM05D006696 ORTHO05D008683 3.4e-236 822.0 582 67.2
TWI14G1225 Tripterygium wilfordii HOM05D006696 ORTHO05D008683 5.8e-236 821.2 579 68.0
CSS0014714 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 1.3e-235 820.1 585 66.7
Lj7C531T6 Lonicera japonica HOM05D006696 ORTHO05D008683 1.7e-235 819.7 590 65.6
Gohir.D13G120600 Gossypium hirsutum HOM05D006696 ORTHO05D008683 4.9e-235 818.1 581 67.3
CiPaw.01G264000 Carya illinoinensis HOM05D006696 ORTHO05D008683 8.3e-235 817.4 625 63.7
VMungo0331G0021 Vigna mungo HOM05D006696 ORTHO05D008683 8.3e-235 817.4 573 67.2
PGSC0003DMG400025962 Solanum tuberosum HOM05D006696 ORTHO05D008683 1.4e-234 816.6 573 67.9
TPR.G7586 Trifolium pratense HOM05D006696 ORTHO05D008683 1.4e-234 816.6 581 67.5
CSS0026641 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 1.9e-234 816.2 585 66.3
Gorai.013G134800 Gossypium raimondii HOM05D006696 ORTHO05D008683 1.9e-234 816.2 581 67.1
Gohir.A13G117300 Gossypium hirsutum HOM05D006696 ORTHO05D008683 1.6e-233 813.1 581 66.4
Aa31LG1G11340 Aethionema arabicum HOM05D006696 ORTHO05D008683 3.5e-233 812.0 571 67.3
Lsat_1_v5_gn_3_132380 Lactuca sativa HOM05D006696 ORTHO05D008683 3.5e-233 812.0 594 64.8
Lalb_Chr07g0189961 Lupinus albus HOM05D006696 ORTHO05D008683 4.6e-233 811.6 574 67.2
Psat7g231000 Pisum sativum HOM05D006696 ORTHO05D008683 1.0e-232 810.4 572 68.2
ClCG05G002380 Citrullus lanatus HOM05D006696 ORTHO05D008683 1.3e-232 810.1 617 63.4
arahy.Tifrunner.gnm1.ann1.PBYD8I Arachis hypogaea HOM05D006696 ORTHO05D008683 1.7e-232 809.7 581 67.0
arahy.Tifrunner.gnm1.ann1.30BUB6 Arachis hypogaea HOM05D006696 ORTHO05D008683 2.3e-232 809.3 581 67.0
Ciclev10019231m.g Citrus clementina HOM05D006696 ORTHO05D008683 3.0e-232 808.9 637 62.5
CsaV3_3G009820 Cucumis sativus L. HOM05D006696 ORTHO05D008683 3.9e-232 808.5 581 65.7
THA.LOC104814083 Tarenaya hassleriana HOM05D006696 ORTHO05D008683 5.0e-232 808.1 577 66.4
Ca_19926_v3 Cicer arietinum L. HOM05D006696 ORTHO05D008683 8.6e-232 807.4 580 67.1
Sopen01g036880 Solanum pennellii HOM05D006696 ORTHO05D008683 8.6e-232 807.4 573 66.7
Rhsim01G0149400 Rhododendron simsii HOM05D006696 ORTHO05D008683 1.9e-231 806.2 622 63.7
PSO782G1103 Papaver somniferum HOM05D006696 ORTHO05D008683 3.3e-231 805.4 573 66.5
Potri.002G146100 Populus trichocarpa HOM05D006696 ORTHO05D008683 3.3e-231 805.4 626 61.7
Haze_16792 Corylus avellana HOM05D006696 ORTHO05D008683 4.3e-231 805.1 584 65.9
HanXRQChr03g0093971 Helianthus annuus HOM05D006696 ORTHO05D008683 1.2e-230 803.5 573 66.3
Sed0011228 Sechium edule HOM05D006696 ORTHO05D008683 1.6e-230 803.1 580 65.9
Sabra02G0113800 Salix brachista HOM05D006696 ORTHO05D008683 6.2e-230 801.2 626 61.2
Solyc01g091130.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 6.2e-230 801.2 573 66.5
Nitab4.5_0000457g0140 Nicotiana tabacum HOM05D006696 ORTHO05D008683 8.0e-230 800.8 600 63.8
AUR62004189 Chenopodium quinoa HOM05D006696 ORTHO05D008683 1.1e-229 800.4 575 65.6
Glyma.03G028100 Glycine max HOM05D006696 ORTHO05D008683 1.1e-229 800.4 575 65.9
Peaxi162Scf00013g03019 Petunia axillaris HOM05D006696 ORTHO05D008683 1.4e-229 800.0 575 66.4
Prupe.2G142200 Prunus persica HOM05D006696 ORTHO05D008683 1.4e-229 800.0 577 66.6
CAN.G388.34 Capsicum annuum HOM05D006696 ORTHO05D008683 2.3e-229 799.3 576 66.1
MELO3C006203.2 Cucumis melo HOM05D006696 ORTHO05D008683 5.2e-229 798.1 623 62.0
PSO478G1798 Papaver somniferum HOM05D006696 ORTHO05D008683 5.2e-229 798.1 572 66.1
RcHm_v2.0_Chr1g0349711 Rosa chinensis HOM05D006696 ORTHO05D008683 6.8e-229 797.7 575 66.4
Nitab4.5_0010616g0010 Nicotiana tabacum HOM05D006696 ORTHO05D008683 2.6e-228 795.8 611 62.8
Cc02_g24120 Coffea canephora HOM05D006696 ORTHO05D008683 5.8e-228 794.7 578 64.9
MD07G1119000 Malus domestica HOM05D006696 ORTHO05D008683 5.8e-228 794.7 609 63.9
QL08p052869 Quercus lobata HOM05D006696 ORTHO05D008683 5.8e-228 794.7 592 65.4
Phvul.010G081400 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 1.3e-227 793.5 573 65.8
Eucgr.D02468 Eucalyptus grandis HOM05D006696 ORTHO05D008683 4.9e-227 791.6 588 65.3
Ah.05g174590 Amaranthus hybridus HOM05D006696 ORTHO05D008683 6.4e-227 791.2 595 64.2
FAN01G1519 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.4e-226 790.0 604 62.9
Duzib177G0277 Durio zibethinus HOM05D006696 ORTHO05D008683 4.1e-226 788.5 570 67.0
EL10Ac1g00866 Beta vulgaris HOM05D006696 ORTHO05D008683 1.2e-225 786.9 592 64.0
Migut.B01614 Erythranthe guttata HOM05D006696 ORTHO05D008683 1.6e-225 786.6 589 64.2
FAN06G3694 Fragaria x ananassa HOM05D006696 ORTHO05D008683 2.1e-225 786.2 604 62.7
MSTRG.20736 Avicennia marina HOM05D006696 ORTHO05D008683 2.7e-225 785.8 604 62.1
FvH4_7g11430 Fragaria vesca HOM05D006696 ORTHO05D008683 2.7e-225 785.8 604 62.9
SGA_v2.0_scaffold95G28911 Striga asiatica HOM05D006696 ORTHO05D008683 2.7e-225 785.8 576 64.6
FAN06G1977 Fragaria x ananassa HOM05D006696 ORTHO05D008683 7.8e-225 784.3 604 62.9
FAN03G1153 Fragaria x ananassa HOM05D006696 ORTHO05D008683 7.3e-223 777.7 604 62.1
vmacro21023 Vaccinium macrocarpon HOM05D006696 ORTHO05D008683 1.8e-221 773.1 684 56.4
Hund27369 Selenicereus undatus HOM05D006696 ORTHO05D008683 2.0e-220 769.6 579 63.2
unitig_22.g5383 Utricularia gibba HOM05D006696 ORTHO05D008683 5.8e-220 768.1 576 63.2
AL1G10260 Arabidopsis lyrata HOM05D006696 ORTHO05D008683 1.1e-218 763.8 637 60.3
ECA232G1408 Erigeron canadensis HOM05D006696 ORTHO05D008683 1.4e-218 763.5 584 62.8
Cpa.g.sc611.2 Carica papaya HOM05D006696 ORTHO05D008683 3.2e-218 762.3 549 65.9
BcaB07g33486 Brassica carinata HOM05D006696 ORTHO05D008683 4.1e-218 761.9 598 62.9
HPP92_022287 Vanilla planifolia HOM05D006696 ORTHO05D008683 1.6e-217 760.0 599 62.1
C06p05680 Brassica napus HOM05D006696 ORTHO05D008683 7.8e-217 757.7 589 63.2
Sp1g37340 Schrenkiella parvula HOM05D006696 ORTHO05D008683 1.7e-216 756.5 584 63.9
AT1G02020 Arabidopsis thaliana HOM05D006696 ORTHO05D008683 4.3e-215 751.9 573 63.5
Carub.0001s0021 Capsella rubella HOM05D006696 ORTHO05D008683 4.3e-215 751.9 569 64.1
BcaC08g43220 Brassica carinata HOM05D006696 ORTHO05D008683 3.6e-214 748.8 590 62.5
BolC6t35679H Brassica oleracea HOM05D006696 ORTHO05D008683 3.6e-214 748.8 590 62.5
A06p03080 Brassica napus HOM05D006696 ORTHO05D008683 4.0e-213 745.3 603 61.4
BraA06t23521Z Brassica rapa HOM05D006696 ORTHO05D008683 8.9e-213 744.2 610 61.0
Thhalv10007140m.g Eutrema salsugineum HOM05D006696 ORTHO05D008683 2.6e-212 742.7 581 64.0
GSVIVG01027661001 Vitis vinifera HOM05D006696 ORTHO05D008683 9.9e-212 740.7 581 63.0
Lj3g0014279 Lotus japonicus HOM05D006696 ORTHO05D008683 3.5e-209 732.3 529 65.6
ATR0041G020 Amborella trichopoda HOM05D006696 ORTHO05D008683 1.5e-207 726.9 572 63.3
Sc26g0001290 Simmondsia chinensis HOM05D006696 ORTHO05D008683 1.4e-205 720.3 570 60.7
SalBow5G3816 Salvia bowleyana HOM05D006696 ORTHO05D008683 6.9e-205 718.0 545 62.6
AUR62013656 Chenopodium quinoa HOM05D006696 ORTHO05D008683 2.2e-195 686.4 566 60.4
Os10g0190800 Oryza sativa ssp. japonica HOM05D006696 ORTHO05D008683 1.4e-186 657.1 574 58.0
SMO011G0006 Selaginella moellendorffii HOM05D006696 ORTHO05D008683 3.9e-184 649.0 582 55.3
SEGI_31859 Sequoiadendron giganteum HOM05D006696 ORTHO05D008683 5.3e-181 638.6 546 58.8
Zm00001eb145800 Zea mays HOM05D006696 ORTHO05D008683 5.5e-178 628.6 572 55.2
Actinidia33475 Actinidia chinensis HOM05D006696 ORTHO05D008683 3.9e-176 622.5 609 52.9
AagrBONN_evm.TU.Sc2ySwM_228.1723 Anthoceros agrestis HOM05D006696 ORTHO05D008683 5.7e-175 618.6 591 54.0
Mapoly0117s0009 Marchantia polymorpha HOM05D006696 ORTHO05D008683 1.2e-172 610.9 592 53.4
Pp3c18_8320 Physcomitrium patens HOM05D006696 ORTHO05D008683 3.6e-169 599.4 597 51.3
CARHR000330 Cardamine hirsuta HOM05D006696 ORTHO05D008683 3.9e-168 595.9 459 63.6
DCAR_015916 Daucus carota HOM05D006696 ORTHO05D008683 3.0e-136 490.0 374 61.2
Solyc01g091140.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 4.0e-120 436.4 513 48.0
Dinv32364 Davidia involucrata HOM05D006696 ORTHO05D008683 6.0e-108 396.0 256 72.3
CANSAT21G0759 Cannabis sativa HOM05D006696 ORTHO05D008683 2.1e-89 334.3 209 71.8
Oeu037929.1 Olea europaea HOM05D006696 ORTHO05D008683 3.8e-70 270.4 186 68.3
Sopen01g036900 Solanum pennellii HOM05D006696 ORTHO05D008683 1.7e-54 218.4 219 52.1
SGA_v2.0_scaffold581G53050 Striga asiatica HOM05D006696 ORTHO05D008683 5.1e-51 206.8 194 51.0
CARHR000320 Cardamine hirsuta HOM05D006696 ORTHO05D008683 7.2e-45 186.4 107 79.4
Atru.chr4.660 Acer truncatum HOM05D006696 ORTHO05D030753 9.8e-26 122.9 133 45.1
Sopen01g036890 Solanum pennellii HOM05D006696 ORTHO05D008683 4.8e-25 120.6 80 71.2
VMungo0720G2385 Vigna mungo HOM05D006696 ORTHO05D008683 1.3e-22 112.5 64 76.6
Zm00001eb027220 Zea mays HOM05D006696 ORTHO05D008683 2.9e-22 111.3 99 49.5
VMungo1309G0520 Vigna mungo HOM05D006696 ORTHO05D008683 3.6e-20 104.4 64 71.9
Phvul.010G066778 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 4.9e-17 94.0 67 65.7
SalBow5G1567 Salvia bowleyana HOM05D006696 ORTHO05D008683 3.3e-13 81.3 43 83.7
Cpa.g.sc14.75 Carica papaya HOM05D006696 ORTHO05D008683 4.7e-12 77.4 36 91.7
Lsat_1_v5_gn_8_142581 Lactuca sativa HOM05D006696 ORTHO05D030753 3.7e-09 67.8 125 37.6
Atru.chr4.903 Acer truncatum HOM05D006696 ORTHO05D030753 1.4e-08 65.9 48 64.6
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 3.5e-07 61.2 34 85.3
Zm00001eb027230 Zea mays HOM05D006696 ORTHO05D008683 1.7e-06 58.9 64 56.2


User provided reference genes

Program Settings