Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1391 Ceratophyllum demersum HOM05D003441 ORTHO05D129623 1.8e-69 265.8 130 100.0
CDE12G0607 Ceratophyllum demersum HOM05D003441 ORTHO05D004516 1.2e-17 93.6 61 77.0
Migut.E01191 Erythranthe guttata HOM05D003441 ORTHO05D004516 2.1e-14 82.8 61 68.9
Lj2C182G1 Lonicera japonica HOM05D003441 ORTHO05D004516 1.1e-13 80.5 61 67.2
QL12p032410 Quercus lobata HOM05D003441 ORTHO05D004516 3.1e-13 79.0 61 65.6
TWI15G1203 Tripterygium wilfordii HOM05D003441 ORTHO05D004516 3.1e-13 79.0 61 65.6
CANSAT25G0732 Cannabis sativa HOM05D003441 ORTHO05D004516 4.0e-13 78.6 61 63.9
Prupe.5G104000 Prunus persica HOM05D003441 ORTHO05D004516 4.0e-13 78.6 61 65.6
RcHm_v2.0_Chr7g0197061 Rosa chinensis HOM05D003441 ORTHO05D004516 4.0e-13 78.6 61 67.2
PGSC0003DMG400012332 Solanum tuberosum HOM05D003441 ORTHO05D004516 4.0e-13 78.6 61 63.9
HPP92_022012 Vanilla planifolia HOM05D003441 ORTHO05D004516 4.0e-13 78.6 79 51.9
Eucgr.E00638 Eucalyptus grandis HOM05D003441 ORTHO05D004516 5.3e-13 78.2 61 65.6
Peaxi162Scf00074g02032 Petunia axillaris HOM05D003441 ORTHO05D004516 5.3e-13 78.2 61 63.9
Solyc08g081340.4 Solanum lycopersicum HOM05D003441 ORTHO05D004516 5.3e-13 78.2 61 63.9
Sopen08g029660 Solanum pennellii HOM05D003441 ORTHO05D004516 5.3e-13 78.2 61 63.9
Nitab4.5_0001220g0100 Nicotiana tabacum HOM05D003441 ORTHO05D004516 6.9e-13 77.8 61 65.6
Nitab4.5_0001522g0040 Nicotiana tabacum HOM05D003441 ORTHO05D004516 6.9e-13 77.8 61 65.6
Nitab4.5_0004114g0020 Nicotiana tabacum HOM05D003441 ORTHO05D004516 6.9e-13 77.8 61 65.6
TWI15G1061 Tripterygium wilfordii HOM05D003441 ORTHO05D004516 6.9e-13 77.8 61 63.9
Atru.chr9.2153 Acer truncatum HOM05D003441 ORTHO05D004516 9.0e-13 77.4 61 63.9
TWI81G0502 Tripterygium wilfordii HOM05D003441 ORTHO05D004516 1.2e-12 77.0 61 63.9
TAR636G0201 Trochodendron aralioides HOM05D003441 ORTHO05D004516 1.2e-12 77.0 61 65.6
Ciclev10019088m.g Citrus clementina HOM05D003441 ORTHO05D004516 1.5e-12 76.6 64 62.5
MELO3C005694.2 Cucumis melo HOM05D003441 ORTHO05D004516 1.5e-12 76.6 61 63.9
FvH4_5g02840 Fragaria vesca HOM05D003441 ORTHO05D004516 1.5e-12 76.6 61 63.9
MBI04_g41820_MAGBIO Magnolia biondii HOM05D003441 ORTHO05D004516 1.5e-12 76.6 61 65.6
GSVIVG01019392001 Vitis vinifera HOM05D003441 ORTHO05D004516 1.5e-12 76.6 61 65.6
CAN.G532.8 Capsicum annuum HOM05D003441 ORTHO05D004516 2.0e-12 76.3 61 62.3
Dinv38921 Davidia involucrata HOM05D003441 ORTHO05D045117 2.0e-12 76.3 52 73.1
Lj8A218G25 Lonicera japonica HOM05D003441 ORTHO05D004516 2.0e-12 76.3 60 65.0
Sabra01G0076300 Salix brachista HOM05D003441 ORTHO05D004516 2.0e-12 76.3 61 62.3
SalBow1G4213 Salvia bowleyana HOM05D003441 ORTHO05D004516 2.0e-12 76.3 61 63.9
Sed0019074 Sechium edule HOM05D003441 ORTHO05D004516 2.0e-12 76.3 42 83.3
CsaV3_5G002620 Cucumis sativus L. HOM05D003441 ORTHO05D004516 2.6e-12 75.9 58 67.2
FAN04G2979 Fragaria x ananassa HOM05D003441 ORTHO05D004516 2.6e-12 75.9 61 63.9
FAN08G0848 Fragaria x ananassa HOM05D003441 ORTHO05D004516 2.6e-12 75.9 61 63.9
FAN13G0786 Fragaria x ananassa HOM05D003441 ORTHO05D004516 2.6e-12 75.9 61 63.9
Lj4g0015025 Lotus japonicus HOM05D003441 ORTHO05D004516 2.6e-12 75.9 61 62.3
MD06G1087900 Malus domestica HOM05D003441 ORTHO05D004516 2.6e-12 75.9 61 63.9
CSS0029160 Camellia sinensis var. sinensis HOM05D003441 ORTHO05D004516 3.4e-12 75.5 61 63.9
CSS0043381 Camellia sinensis var. sinensis HOM05D003441 ORTHO05D004516 3.4e-12 75.5 61 63.9
Lalb_Chr16g0390181 Lupinus albus HOM05D003441 ORTHO05D004516 3.4e-12 75.5 61 62.3
HPP92_021979 Vanilla planifolia HOM05D003441 ORTHO05D004516 3.4e-12 75.5 61 62.3
MSTRG.11971 Avicennia marina HOM05D003441 ORTHO05D004516 4.4e-12 75.1 61 62.3
ClCG01G002520 Citrullus lanatus HOM05D003441 ORTHO05D004516 4.4e-12 75.1 42 81.0
PSO017G3334 Papaver somniferum HOM05D003441 ORTHO05D004516 4.4e-12 75.1 47 70.2
PSO421G0274 Papaver somniferum HOM05D003441 ORTHO05D004516 4.4e-12 75.1 47 70.2
SEGI_31025 Sequoiadendron giganteum HOM05D003441 ORTHO05D004516 4.4e-12 75.1 36 91.7
Actinidia28364 Actinidia chinensis HOM05D003441 ORTHO05D004516 5.8e-12 74.7 61 63.9
Cc08_g15010 Coffea canephora HOM05D003441 ORTHO05D004516 5.8e-12 74.7 42 78.6
HanXRQChr17g0533461 Helianthus annuus HOM05D003441 ORTHO05D004516 5.8e-12 74.7 61 60.7
MBI04_g35068_MAGBIO Magnolia biondii HOM05D003441 ORTHO05D004516 5.8e-12 74.7 42 78.6
Nn6g33339 Nelumbo nucifera HOM05D003441 ORTHO05D004516 5.8e-12 74.7 42 78.6
Oeu030097.4 Olea europaea HOM05D003441 ORTHO05D004516 5.8e-12 74.7 42 78.6
Pp3c6_13890 Physcomitrium patens HOM05D003441 ORTHO05D004516 5.8e-12 74.7 80 50.0
Psat7g031680 Pisum sativum HOM05D003441 ORTHO05D004516 5.8e-12 74.7 61 60.7
TPR.G12826 Trifolium pratense HOM05D003441 ORTHO05D004516 5.8e-12 74.7 61 62.3
Cfa012202 Carpinus fangiana HOM05D003441 ORTHO05D004516 7.6e-12 74.3 61 62.3
Haze_08814 Corylus avellana HOM05D003441 ORTHO05D004516 7.6e-12 74.3 61 62.3
Manes.02G021700 Manihot esculenta HOM05D003441 ORTHO05D004516 7.6e-12 74.3 61 62.3
Rhsim02G0234100 Rhododendron simsii HOM05D003441 ORTHO05D004516 7.6e-12 74.3 42 76.2
Hund10975 Selenicereus undatus HOM05D003441 ORTHO05D004516 7.6e-12 74.3 61 60.7
unitig_62.g23538 Utricularia gibba HOM05D003441 ORTHO05D004516 7.6e-12 74.3 42 78.6
AUR62010445 Chenopodium quinoa HOM05D003441 ORTHO05D004516 9.9e-12 73.9 36 88.9
ECA246G2088 Erigeron canadensis HOM05D003441 ORTHO05D004516 9.9e-12 73.9 80 46.2
PSO478G5020 Papaver somniferum HOM05D003441 ORTHO05D004516 9.9e-12 73.9 47 68.1
PGR042G0359 Punica granatum HOM05D003441 ORTHO05D004516 9.9e-12 73.9 61 62.3
Zm00001eb156220 Zea mays HOM05D003441 ORTHO05D004516 9.9e-12 73.9 36 88.9
Aa31LG5G13590 Aethionema arabicum HOM05D003441 ORTHO05D004516 1.3e-11 73.6 40 82.5
ATR0661G194 Amborella trichopoda HOM05D003441 ORTHO05D004516 1.3e-11 73.6 61 63.9
AL7G48050 Arabidopsis lyrata HOM05D003441 ORTHO05D004516 1.3e-11 73.6 40 82.5
AT5G41370 Arabidopsis thaliana HOM05D003441 ORTHO05D004516 1.3e-11 73.6 40 82.5
CARHR212960 Cardamine hirsuta HOM05D003441 ORTHO05D004516 1.3e-11 73.6 40 82.5
Cpa.g.sc180.13 Carica papaya HOM05D003441 ORTHO05D004516 1.3e-11 73.6 42 76.2
COL.COLO4_34498 Corchorus olitorius HOM05D003441 ORTHO05D004516 1.3e-11 73.6 42 76.2
Dinv37619 Davidia involucrata HOM05D003441 ORTHO05D004516 1.3e-11 73.6 43 79.1
Glyma.05G209700 Glycine max HOM05D003441 ORTHO05D004516 1.3e-11 73.6 42 76.2
Glyma.08G016400 Glycine max HOM05D003441 ORTHO05D004516 1.3e-11 73.6 42 76.2
Gohir.A11G022800 Gossypium hirsutum HOM05D003441 ORTHO05D004516 1.3e-11 73.6 42 76.2
Gohir.D11G022333 Gossypium hirsutum HOM05D003441 ORTHO05D004516 1.3e-11 73.6 42 76.2
Gorai.007G023800 Gossypium raimondii HOM05D003441 ORTHO05D004516 1.3e-11 73.6 42 76.2
Lsat_1_v5_gn_2_120601 Lactuca sativa HOM05D003441 ORTHO05D004516 1.3e-11 73.6 40 82.5
Lsat_1_v5_gn_3_6121 Lactuca sativa HOM05D003441 ORTHO05D004516 1.3e-11 73.6 42 78.6
Lalb_Chr05g0224631 Lupinus albus HOM05D003441 ORTHO05D004516 1.3e-11 73.6 42 76.2
Mapoly0037s0100 Marchantia polymorpha HOM05D003441 ORTHO05D004516 1.3e-11 73.6 42 76.2
Sc07g0009820 Simmondsia chinensis HOM05D003441 ORTHO05D004516 1.3e-11 73.6 42 76.2
SGA_v2.0_scaffold144G35916 Striga asiatica HOM05D003441 ORTHO05D004516 1.3e-11 73.6 42 76.2
Thecc.03G282800 Theobroma cacao HOM05D003441 ORTHO05D004516 1.3e-11 73.6 42 76.2
TPR.G33074 Trifolium pratense HOM05D003441 ORTHO05D004516 1.3e-11 73.6 42 76.2
VMungo0251G2080 Vigna mungo HOM05D003441 ORTHO05D004516 1.3e-11 73.6 42 76.2
AL7G48070 Arabidopsis lyrata HOM05D003441 ORTHO05D004516 1.7e-11 73.2 40 80.0
CiPaw.12G091100 Carya illinoinensis HOM05D003441 ORTHO05D004516 1.7e-11 73.2 58 65.5
Ca_10937_v3 Cicer arietinum L. HOM05D003441 ORTHO05D004516 1.7e-11 73.2 58 62.1
DCAR_005566 Daucus carota HOM05D003441 ORTHO05D004516 1.7e-11 73.2 42 73.8
Gohir.D03G149600 Gossypium hirsutum HOM05D003441 ORTHO05D004516 1.7e-11 73.2 61 62.3
HanXRQChr06g0165951 Helianthus annuus HOM05D003441 ORTHO05D004516 1.7e-11 73.2 63 58.7
Phvul.002G291500 Phaseolus vulgaris HOM05D003441 ORTHO05D004516 1.7e-11 73.2 42 73.8
Potri.001G101300 Populus trichocarpa HOM05D003441 ORTHO05D004516 1.7e-11 73.2 42 73.8
PGSC0003DMG400026783 Solanum tuberosum HOM05D003441 ORTHO05D004516 1.7e-11 73.2 36 88.9
vmacro11393 Vaccinium macrocarpon HOM05D003441 ORTHO05D004516 1.7e-11 73.2 40 80.0
EL10Ac5g12531 Beta vulgaris HOM05D003441 ORTHO05D004516 2.2e-11 72.8 36 86.1
Gorai.003G156900 Gossypium raimondii HOM05D003441 ORTHO05D004516 2.2e-11 72.8 42 76.2
Medtr8g098675 Medicago truncatula HOM05D003441 ORTHO05D004516 2.2e-11 72.8 61 59.0
unitig_62.g23537 Utricularia gibba HOM05D003441 ORTHO05D004516 2.2e-11 72.8 61 60.7
arahy.Tifrunner.gnm1.ann1.5RI6ER Arachis hypogaea HOM05D003441 ORTHO05D004516 2.9e-11 72.4 58 63.8
arahy.Tifrunner.gnm1.ann1.75Q964 Arachis hypogaea HOM05D003441 ORTHO05D004516 2.9e-11 72.4 58 63.8
Carub.0007s3411 Capsella rubella HOM05D003441 ORTHO05D004516 2.9e-11 72.4 40 80.0
AUR62030470 Chenopodium quinoa HOM05D003441 ORTHO05D004516 2.9e-11 72.4 36 86.1
Duzib084G0223 Durio zibethinus HOM05D003441 ORTHO05D004516 2.9e-11 72.4 42 73.8
Duzib205G0291 Durio zibethinus HOM05D003441 ORTHO05D004516 2.9e-11 72.4 42 73.8
Glyma.08G323500 Glycine max HOM05D003441 ORTHO05D004516 2.9e-11 72.4 42 73.8
Gohir.D11G022366 Gossypium hirsutum HOM05D003441 ORTHO05D004516 2.9e-11 72.4 61 62.3
Os01g0691600 Oryza sativa ssp. japonica HOM05D003441 ORTHO05D004516 2.9e-11 72.4 36 86.1
THA.LOC104817891 Tarenaya hassleriana HOM05D003441 ORTHO05D004516 2.9e-11 72.4 40 80.0
RcHm_v2.0_Chr1g0341861 Rosa chinensis HOM05D003441 ORTHO05D004516 3.8e-11 72.0 61 59.0
Ah.12g058870 Amaranthus hybridus HOM05D003441 ORTHO05D004516 4.9e-11 71.6 42 73.8
Nitab4.5_0002290g0010 Nicotiana tabacum HOM05D003441 ORTHO05D004516 6.4e-11 71.2 50 68.0
SalBow1G5824 Salvia bowleyana HOM05D003441 ORTHO05D004516 6.4e-11 71.2 42 73.8
SHI07186 Sapria himalayana HOM05D003441 ORTHO05D004516 6.4e-11 71.2 36 86.1
SMO115G0252 Selaginella moellendorffii HOM05D003441 ORTHO05D004516 6.4e-11 71.2 42 73.8
AT5G41360 Arabidopsis thaliana HOM05D003441 ORTHO05D004516 8.4e-11 70.9 40 80.0
Nitab4.5_0004008g0010 Nicotiana tabacum HOM05D003441 ORTHO05D004516 1.1e-10 70.5 50 68.0
Aqoxy1G00680 Aquilegia oxysepala HOM05D003441 ORTHO05D004516 1.4e-10 70.1 61 59.0
A04p14500 Brassica napus HOM05D003441 ORTHO05D004516 1.4e-10 70.1 58 60.3
C04p48400 Brassica napus HOM05D003441 ORTHO05D004516 1.4e-10 70.1 58 60.3
BolC4t26434H Brassica oleracea HOM05D003441 ORTHO05D004516 1.4e-10 70.1 58 60.3
BraA04t17095Z Brassica rapa HOM05D003441 ORTHO05D004516 1.4e-10 70.1 58 60.3
Gohir.A03G019400 Gossypium hirsutum HOM05D003441 ORTHO05D004516 1.4e-10 70.1 42 73.8
Carub.0007s3412 Capsella rubella HOM05D003441 ORTHO05D004516 1.9e-10 69.7 61 57.4
Thhalv10027651m.g Eutrema salsugineum HOM05D003441 ORTHO05D004516 1.9e-10 69.7 40 77.5
Sp7g00580 Schrenkiella parvula HOM05D003441 ORTHO05D004516 1.9e-10 69.7 40 77.5
SpUn0010_0060 Schrenkiella parvula HOM05D003441 ORTHO05D004516 1.9e-10 69.7 40 77.5
BcaC02g08964 Brassica carinata HOM05D003441 ORTHO05D004516 2.4e-10 69.3 58 58.6
AagrBONN_evm.TU.Sc2ySwM_368.2338 Anthoceros agrestis HOM05D003441 ORTHO05D004516 3.2e-10 68.9 42 71.4
BcaB02g07896 Brassica carinata HOM05D003441 ORTHO05D004516 3.2e-10 68.9 58 60.3
BolC6t37164H Brassica oleracea HOM05D003441 ORTHO05D004516 3.2e-10 68.9 58 60.3
FAN01G0379 Fragaria x ananassa HOM05D003441 ORTHO05D004516 3.2e-10 68.9 61 57.4
FAN18G3267 Fragaria x ananassa HOM05D003441 ORTHO05D004516 3.2e-10 68.9 42 69.0
BcaB06g27616 Brassica carinata HOM05D003441 ORTHO05D004516 4.2e-10 68.6 58 60.3
FAN06G0185 Fragaria x ananassa HOM05D003441 ORTHO05D004516 4.2e-10 68.6 60 58.3
CBR_g34305 Chara braunii HOM05D003441 ORTHO05D004516 7.1e-10 67.8 40 72.5
ECA246G1863 Erigeron canadensis HOM05D003441 ORTHO05D004516 7.1e-10 67.8 64 53.1
Aqoxy5G02024 Aquilegia oxysepala HOM05D003441 ORTHO05D004516 9.3e-10 67.4 36 77.8
BcaC08g44524 Brassica carinata HOM05D003441 ORTHO05D004516 9.3e-10 67.4 58 58.6
C06p19750 Brassica napus HOM05D003441 ORTHO05D004516 9.3e-10 67.4 58 58.6
RcHm_v2.0_Chr1g0341621 Rosa chinensis HOM05D003441 ORTHO05D004516 9.3e-10 67.4 42 66.7
SEGI_12688 Sequoiadendron giganteum HOM05D003441 ORTHO05D000001 9.3e-10 67.4 51 64.7
A07p20760 Brassica napus HOM05D003441 ORTHO05D004516 2.1e-09 66.2 58 58.6
BraA07t29768Z Brassica rapa HOM05D003441 ORTHO05D004516 2.1e-09 66.2 58 58.6
FvH4_7g07850 Fragaria vesca HOM05D003441 ORTHO05D004516 2.1e-09 66.2 83 44.6
SMO347G0324 Selaginella moellendorffii HOM05D003441 ORTHO05D004516 2.1e-09 66.2 57 57.9
FAN06G2516 Fragaria x ananassa HOM05D003441 ORTHO05D004516 2.7e-09 65.9 41 65.9
FAN10G3500 Fragaria x ananassa HOM05D003441 ORTHO05D004516 2.7e-09 65.9 41 65.9
Oeu018831.2 Olea europaea HOM05D000241 ORTHO05D001001 1.0e-08 63.9 40 72.5
RcHm_v2.0_Chr1g0341611 Rosa chinensis HOM05D003441 ORTHO05D004516 1.0e-08 63.9 61 52.5
CARHR183180 Cardamine hirsuta HOM05D003441 ORTHO05D004516 1.3e-08 63.5 40 72.5
FvH4_7g08220 Fragaria vesca HOM05D003441 ORTHO05D004516 1.3e-08 63.5 42 61.9
FAN03G2549 Fragaria x ananassa HOM05D003441 ORTHO05D004516 1.3e-08 63.5 63 52.4
BolC6t37163H Brassica oleracea HOM05D003441 ORTHO05D004516 1.7e-08 63.2 40 72.5
AUR62022736 Chenopodium quinoa HOM05D003441 ORTHO05D004516 1.7e-08 63.2 61 55.7
BcaC08g44523 Brassica carinata HOM05D003441 ORTHO05D004516 3.9e-08 62.0 40 70.0
PRCOL_00001151 Prasinoderma coloniale HOM05D003441 ORTHO05D004516 3.3e-07 58.9 46 54.3
SHI07184 Sapria himalayana HOM05D000105 ORTHO05D000023 7.3e-07 57.8 56 53.6
MCO01G486 Micromonas commoda HOM05D003441 ORTHO05D004516 1.6e-06 56.6 38 68.4
Cre06.g297016 Chlamydomonas reinhardtii HOM05D003441 ORTHO05D004516 4.8e-06 55.1 39 56.4


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