Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1235 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 9.6e-106 386.7 180 100.0
Aqoxy5G02229 Aquilegia oxysepala HOM05D006465 ORTHO05D000054 5.3e-48 194.9 144 63.9
Nn5g28548 Nelumbo nucifera HOM05D006465 ORTHO05D008207 5.9e-47 191.4 129 68.2
Ah.02g121490 Amaranthus hybridus HOM05D006465 ORTHO05D008207 1.7e-46 189.9 116 71.6
Manes.03G123050 Manihot esculenta HOM05D006465 ORTHO05D008207 1.7e-46 189.9 110 75.5
EL10Ac6g15303 Beta vulgaris HOM05D006465 ORTHO05D008207 5.0e-46 188.3 120 68.3
TWI79G1280 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 5.0e-46 188.3 112 70.5
Hund23271 Selenicereus undatus HOM05D006465 ORTHO05D008207 6.5e-46 188.0 115 72.2
Hma1.2p1_0476F.1_g160840 Hydrangea macrophylla HOM05D006465 ORTHO05D008207 1.1e-45 187.2 110 73.6
Thecc.01G132600 Theobroma cacao HOM05D006465 ORTHO05D008207 1.1e-45 187.2 115 70.4
CiPaw.04G082200 Carya illinoinensis HOM05D006465 ORTHO05D008207 5.5e-45 184.9 113 69.0
Ciclev10002814m.g Citrus clementina HOM05D006465 ORTHO05D008207 5.5e-45 184.9 112 70.5
MD07G1057500 Malus domestica HOM05D006465 ORTHO05D008207 1.6e-44 183.3 113 68.1
PSO017G4081 Papaver somniferum HOM05D006465 ORTHO05D008207 1.6e-44 183.3 138 63.0
Potri.005G063100 Populus trichocarpa HOM05D006465 ORTHO05D008207 1.6e-44 183.3 113 69.0
THA.LOC104800074 Tarenaya hassleriana HOM05D006465 ORTHO05D008207 2.1e-44 183.0 109 73.4
TAR381G0246 Trochodendron aralioides HOM05D006465 ORTHO05D008207 2.1e-44 183.0 112 71.4
AUR62017880 Chenopodium quinoa HOM05D006465 ORTHO05D008207 2.7e-44 182.6 116 69.0
Duzib187G1992 Durio zibethinus HOM05D006465 ORTHO05D008207 3.6e-44 182.2 115 68.7
AUR62003565 Chenopodium quinoa HOM05D006465 ORTHO05D008207 4.7e-44 181.8 116 68.1
Sc07g0001830 Simmondsia chinensis HOM05D006465 ORTHO05D008207 6.1e-44 181.4 109 70.6
CANSAT01G2296 Cannabis sativa HOM05D006465 ORTHO05D008207 1.0e-43 180.6 118 67.8
Dinv07122 Davidia involucrata HOM05D006465 ORTHO05D008207 1.0e-43 180.6 110 70.0
TWI75G0808 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 1.4e-43 180.3 109 69.7
Glyma.06G153700 Glycine max HOM05D006465 ORTHO05D008207 3.0e-43 179.1 112 70.5
PGR119G2011 Punica granatum HOM05D006465 ORTHO05D008207 3.0e-43 179.1 118 66.1
TPR.G28231 Trifolium pratense HOM05D006465 ORTHO05D008207 3.0e-43 179.1 112 69.6
Prupe.4G271100 Prunus persica HOM05D006465 ORTHO05D008207 5.2e-43 178.3 115 65.2
Medtr3g096320 Medicago truncatula HOM05D006465 ORTHO05D008207 6.7e-43 177.9 112 68.8
GSVIVG01026483001 Vitis vinifera HOM05D006465 ORTHO05D008207 8.8e-43 177.6 113 69.0
Actinidia06618 Actinidia chinensis HOM05D006465 ORTHO05D008207 1.2e-42 177.2 115 66.1
Sabra05G0052300 Salix brachista HOM05D006465 ORTHO05D008207 1.2e-42 177.2 113 65.5
TAR625G1289 Trochodendron aralioides HOM05D006465 ORTHO05D008207 1.2e-42 177.2 122 66.4
CSS0043698 Camellia sinensis var. sinensis HOM05D006465 ORTHO05D008207 1.5e-42 176.8 110 68.2
FvH4_2g08820 Fragaria vesca HOM05D006465 ORTHO05D008207 1.5e-42 176.8 115 67.0
FAN10G0435 Fragaria x ananassa HOM05D006465 ORTHO05D008207 1.5e-42 176.8 115 67.0
FAN15G0521 Fragaria x ananassa HOM05D006465 ORTHO05D008207 1.5e-42 176.8 115 67.0
Lj4A839G53 Lonicera japonica HOM05D006465 ORTHO05D008207 2.0e-42 176.4 116 66.4
A03p04100 Brassica napus HOM05D006465 ORTHO05D008207 2.6e-42 176.0 107 70.1
BolC3t12987H Brassica oleracea HOM05D006465 ORTHO05D008207 2.6e-42 176.0 107 70.1
BraA03t09753Z Brassica rapa HOM05D006465 ORTHO05D008207 2.6e-42 176.0 107 70.1
PSO170G5905 Papaver somniferum HOM05D006465 ORTHO05D008207 2.6e-42 176.0 120 67.5
CARHR204090 Cardamine hirsuta HOM05D006465 ORTHO05D008207 3.3e-42 175.6 107 69.2
Glyma.04G212600 Glycine max HOM05D006465 ORTHO05D008207 3.3e-42 175.6 112 69.6
Lalb_Chr08g0238351 Lupinus albus HOM05D006465 ORTHO05D008207 4.4e-42 175.3 121 66.9
Psat5g062320 Pisum sativum HOM05D006465 ORTHO05D008207 4.4e-42 175.3 112 68.8
BcaB08g37219 Brassica carinata HOM05D006465 ORTHO05D008207 5.7e-42 174.9 120 65.0
A10p27930 Brassica napus HOM05D006465 ORTHO05D008207 5.7e-42 174.9 120 65.8
C03p04560 Brassica napus HOM05D006465 ORTHO05D008207 5.7e-42 174.9 107 68.2
Thhalv10014951m.g Eutrema salsugineum HOM05D006465 ORTHO05D008207 5.7e-42 174.9 107 70.1
RcHm_v2.0_Chr6g0264391 Rosa chinensis HOM05D006465 ORTHO05D008207 5.7e-42 174.9 112 67.0
Sed0005537 Sechium edule HOM05D006465 ORTHO05D008207 5.7e-42 174.9 110 67.3
BraA10t44842Z Brassica rapa HOM05D006465 ORTHO05D008207 7.5e-42 174.5 107 70.1
Cc07_g18520 Coffea canephora HOM05D006465 ORTHO05D008207 7.5e-42 174.5 113 68.1
Nitab4.5_0000181g0060 Nicotiana tabacum HOM05D006465 ORTHO05D008207 9.7e-42 174.1 110 70.0
Ca_16948_v3 Cicer arietinum L. HOM05D002517 ORTHO05D003040 1.3e-41 173.7 112 68.8
Ca_16968_v3 Cicer arietinum L. HOM05D006465 ORTHO05D008207 1.3e-41 173.7 112 68.8
Gohir.A05G384500 Gossypium hirsutum HOM05D005188 ORTHO05D006153 1.3e-41 173.7 111 69.4
Lj1g0025116 Lotus japonicus HOM05D006465 ORTHO05D008207 1.7e-41 173.3 112 67.9
Phvul.009G150900 Phaseolus vulgaris HOM05D006465 ORTHO05D008207 1.7e-41 173.3 112 67.9
Aa31LG3G17710 Aethionema arabicum HOM05D003132 ORTHO05D003736 2.2e-41 172.9 106 68.9
Lsat_1_v5_gn_9_25981 Lactuca sativa HOM05D006465 ORTHO05D008207 2.2e-41 172.9 108 71.3
Atru.chr4.901 Acer truncatum HOM05D006465 ORTHO05D008207 2.8e-41 172.6 120 63.3
Gohir.D04G031000 Gossypium hirsutum HOM05D006465 ORTHO05D008207 3.7e-41 172.2 111 67.6
Gorai.012G035200 Gossypium raimondii HOM05D005188 ORTHO05D006153 3.7e-41 172.2 111 67.6
Peaxi162Scf00270g01115 Petunia axillaris HOM05D006465 ORTHO05D008207 3.7e-41 172.2 110 68.2
PGSC0003DMG400030138 Solanum tuberosum HOM05D006465 ORTHO05D008207 3.7e-41 172.2 110 67.3
AT5G09310 Arabidopsis thaliana HOM05D006465 ORTHO05D008207 6.3e-41 171.4 107 70.1
arahy.Tifrunner.gnm1.ann1.X6LXMM Arachis hypogaea HOM05D006465 ORTHO05D008207 6.3e-41 171.4 121 64.5
ClCG02G000500 Citrullus lanatus HOM05D006465 ORTHO05D008207 8.2e-41 171.0 110 68.2
Dinv24364 Davidia involucrata HOM05D006465 ORTHO05D008207 8.2e-41 171.0 108 67.6
ECA247G0944 Erigeron canadensis HOM05D006465 ORTHO05D008207 8.2e-41 171.0 130 63.1
Sopen06g005870 Solanum pennellii HOM05D006465 ORTHO05D008207 8.2e-41 171.0 110 66.4
vmacro12798 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 8.2e-41 171.0 115 64.3
HanXRQChr15g0491331 Helianthus annuus HOM05D006465 ORTHO05D008207 1.1e-40 170.6 109 69.7
unitig_88.g27767 Utricularia gibba HOM05D006465 ORTHO05D008207 1.1e-40 170.6 121 64.5
AL6G19700 Arabidopsis lyrata HOM05D006465 ORTHO05D008207 1.4e-40 170.2 107 69.2
Carub.0006s0786 Capsella rubella HOM05D006465 ORTHO05D008207 1.4e-40 170.2 107 69.2
Haze_25235 Corylus avellana HOM05D006465 ORTHO05D008207 2.4e-40 169.5 109 67.0
CsaV3_2G018330 Cucumis sativus L. HOM05D006465 ORTHO05D008207 2.4e-40 169.5 110 67.3
Sp6g34010 Schrenkiella parvula HOM05D006465 ORTHO05D008207 4.1e-40 168.7 107 68.2
CAN.G934.1 Capsicum annuum HOM05D006465 ORTHO05D008207 7.0e-40 167.9 110 65.5
Migut.L00965 Erythranthe guttata HOM05D006465 ORTHO05D008207 1.2e-39 167.2 111 67.6
HPP92_019397 Vanilla planifolia HOM05D006465 ORTHO05D008207 2.0e-39 166.4 111 68.5
DCAR_014336 Daucus carota HOM05D006465 ORTHO05D008207 4.5e-39 165.2 114 64.0
arahy.Tifrunner.gnm1.ann1.Q2CXKS Arachis hypogaea HOM05D006465 ORTHO05D008207 5.9e-39 164.9 137 56.9
Oeu004242.1 Olea europaea HOM05D006465 ORTHO05D008207 7.7e-39 164.5 114 64.9
Migut.L00880 Erythranthe guttata HOM05D006465 ORTHO05D008207 1.3e-38 163.7 111 65.8
MSTRG.3605 Avicennia marina HOM05D006465 ORTHO05D008207 1.7e-38 163.3 110 66.4
ATR0138G005 Amborella trichopoda HOM05D006465 ORTHO05D008207 1.1e-37 160.6 108 65.7
VMungo1309G0274 Vigna mungo HOM05D006465 ORTHO05D008207 1.1e-37 160.6 114 63.2
Oeu050125.1 Olea europaea HOM05D006465 ORTHO05D008207 7.2e-37 157.9 119 62.2
Hund04414 Selenicereus undatus HOM05D006465 ORTHO05D008207 1.6e-36 156.8 168 47.6
CDE12G0205 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 2.7e-36 156.0 75 90.7
SGA_v2.0_scaffold19G08773 Striga asiatica HOM05D006465 ORTHO05D008207 1.8e-35 153.3 111 64.0
Os01g0960000 Oryza sativa ssp. japonica HOM05D006465 ORTHO05D008207 4.0e-35 152.1 142 52.8
Zm00001eb362550 Zea mays HOM05D006465 ORTHO05D008207 6.8e-35 151.4 141 52.5
SalBow7G2903 Salvia bowleyana HOM05D006465 ORTHO05D008207 8.8e-35 151.0 125 58.4
MELO3C023238.2 Cucumis melo HOM05D006465 ORTHO05D008207 3.4e-34 149.1 138 52.9
FAN24G0187 Fragaria x ananassa HOM05D006465 ORTHO05D008207 5.7e-34 148.3 101 63.4
QL10p043584 Quercus lobata HOM05D006465 ORTHO05D008207 7.5e-34 147.9 152 46.7
AagrBONN_evm.TU.Sc2ySwM_117.2181 Anthoceros agrestis HOM05D006465 ORTHO05D008207 1.6e-31 140.2 107 57.0
FvH4_3g04510 Fragaria vesca HOM05D006465 ORTHO05D008207 1.3e-30 137.1 95 63.2
FAN11G3155 Fragaria x ananassa HOM05D006465 ORTHO05D008207 1.7e-30 136.7 95 63.2
Mapoly0113s0017 Marchantia polymorpha HOM05D006465 ORTHO05D008207 3.2e-29 132.5 112 48.2
Pp3c15_3010 Physcomitrium patens HOM05D006465 ORTHO05D008207 6.8e-27 124.8 102 52.9
SMO367G0154 Selaginella moellendorffii HOM05D006465 ORTHO05D008207 9.2e-24 114.4 109 49.5
SEGI_17702 Sequoiadendron giganteum HOM05D006465 ORTHO05D008207 1.3e-22 110.5 96 52.1
MD02G1262600 Malus domestica HOM05D006465 ORTHO05D008207 5.6e-21 105.1 58 70.7
Potri.007G106200 Populus trichocarpa HOM05D006465 ORTHO05D008207 2.6e-18 96.3 88 54.5
Solyc06g016760.3 Solanum lycopersicum HOM05D006465 ORTHO05D008207 4.4e-18 95.5 51 72.5
CBR_g29852 Chara braunii HOM05D006465 ORTHO05D008207 6.4e-17 91.7 98 44.9
Eucgr.I00202 Eucalyptus grandis HOM05D006465 ORTHO05D008207 6.6e-14 81.6 50 70.0
Lalb_Chr11g0068471 Lupinus albus HOM05D006465 ORTHO05D008207 1.1e-13 80.9 68 54.4
Lalb_Chr11g0068481 Lupinus albus HOM05D006465 ORTHO05D008207 1.5e-13 80.5 53 67.9
vmacro20733 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 7.3e-13 78.2 51 68.6
Rhsim10G0133300 Rhododendron simsii HOM05D006465 ORTHO05D008207 1.6e-12 77.0 51 66.7
BolC9t59563H Brassica oleracea HOM05D006465 ORTHO05D008207 2.1e-12 76.6 45 73.3
Lj4A838T21 Lonicera japonica HOM05D006465 ORTHO05D008207 6.2e-12 75.1 51 66.7
Cc00_g31500 Coffea canephora HOM05D006465 ORTHO05D008207 8.9e-11 71.2 48 64.6
Cc00_g19040 Coffea canephora HOM05D006465 ORTHO05D008207 1.5e-10 70.5 48 64.6
PRCOL_00001485 Prasinoderma coloniale HOM05D006465 ORTHO05D008207 2.9e-09 66.2 94 40.4
Cre07.g323050 Chlamydomonas reinhardtii HOM05D006465 ORTHO05D008207 3.7e-09 65.9 71 38.0


User provided reference genes

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