Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0498 Ceratophyllum demersum HOM05D000827 ORTHO05D001576 2.2e-67 258.8 132 100.0
CDE06G0687 Ceratophyllum demersum HOM05D000827 ORTHO05D001576 2.5e-39 165.6 112 78.6
Dinv13968 Davidia involucrata HOM05D000827 ORTHO05D001576 4.2e-18 95.1 84 61.9
Dinv07406 Davidia involucrata HOM05D000827 ORTHO05D001576 2.7e-17 92.4 84 60.7
TAR627G0441 Trochodendron aralioides HOM05D000827 ORTHO05D001576 8.0e-17 90.9 85 57.6
TAR627G1209 Trochodendron aralioides HOM05D000827 ORTHO05D001576 8.0e-17 90.9 85 57.6
Duzib192G1053 Durio zibethinus HOM05D000827 ORTHO05D001576 1.0e-16 90.5 85 56.5
Duzib235G0579 Durio zibethinus HOM05D000827 ORTHO05D001576 6.7e-16 87.8 88 55.7
Nn1g07395 Nelumbo nucifera HOM05D000827 ORTHO05D001576 6.7e-16 87.8 78 62.8
TAR629G3131 Trochodendron aralioides HOM05D000827 ORTHO05D001576 6.7e-16 87.8 85 57.6
Cfa000097 Carpinus fangiana HOM05D000827 ORTHO05D001576 8.8e-16 87.4 136 47.8
Haze_06928 Corylus avellana HOM05D000827 ORTHO05D001576 8.8e-16 87.4 130 48.5
Hma1.2p1_0657F.1_g197130 Hydrangea macrophylla HOM05D000827 ORTHO05D001576 8.8e-16 87.4 88 56.8
TAR626G0283 Trochodendron aralioides HOM05D000827 ORTHO05D001576 8.8e-16 87.4 87 57.5
Actinidia11887 Actinidia chinensis HOM05D000827 ORTHO05D001576 2.0e-15 86.3 107 48.6
CSS0017282 Camellia sinensis var. sinensis HOM05D000827 ORTHO05D022146 2.0e-15 86.3 94 55.3
Thecc.06G233700 Theobroma cacao HOM05D000827 ORTHO05D001576 2.0e-15 86.3 88 55.7
Haze_06935 Corylus avellana HOM05D000827 ORTHO05D001576 2.6e-15 85.9 128 48.4
TWI63G0892 Tripterygium wilfordii HOM05D000827 ORTHO05D001576 2.6e-15 85.9 102 52.9
Rhsim02G0099300 Rhododendron simsii HOM05D000827 ORTHO05D001576 3.3e-15 85.5 84 57.1
vmacro15761 Vaccinium macrocarpon HOM05D000827 ORTHO05D001576 5.7e-15 84.7 121 47.1
VMungo1215G2936 Vigna mungo HOM05D000827 ORTHO05D001576 5.7e-15 84.7 140 43.6
Gorai.010G249800 Gossypium raimondii HOM05D000827 ORTHO05D001576 7.4e-15 84.3 89 55.1
Phvul.003G083900 Phaseolus vulgaris HOM05D000827 ORTHO05D001576 9.7e-15 84.0 139 43.2
Glyma.07G265400 Glycine max HOM05D000827 ORTHO05D001576 1.3e-14 83.6 125 45.6
MD10G1332000 Malus domestica HOM05D000827 ORTHO05D001576 1.3e-14 83.6 74 62.2
Actinidia39271 Actinidia chinensis HOM05D000827 ORTHO05D001576 1.7e-14 83.2 108 46.3
THA.LOC104812994 Tarenaya hassleriana HOM05D000827 ORTHO05D001576 1.7e-14 83.2 143 42.0
Duzib160G0265 Durio zibethinus HOM05D000827 ORTHO05D001576 2.2e-14 82.8 88 54.5
THA.LOC104813595 Tarenaya hassleriana HOM05D000827 ORTHO05D001576 2.2e-14 82.8 107 49.5
Glyma.17G008600 Glycine max HOM05D000827 ORTHO05D001576 2.8e-14 82.4 137 44.5
Gohir.A06G205100 Gossypium hirsutum HOM05D000827 ORTHO05D001576 3.7e-14 82.0 89 55.1
Gohir.D06G216400 Gossypium hirsutum HOM05D000827 ORTHO05D001576 4.8e-14 81.6 89 53.9
MD05G1358100 Malus domestica HOM05D000827 ORTHO05D001576 4.8e-14 81.6 80 58.8
GSVIVG01003340001 Vitis vinifera HOM05D000827 ORTHO05D001576 4.8e-14 81.6 105 49.5
Oeu016819.1 Olea europaea HOM05D000827 ORTHO05D001576 6.3e-14 81.3 104 52.9
GSVIVG01003333001 Vitis vinifera HOM05D000827 ORTHO05D001576 6.3e-14 81.3 105 48.6
arahy.Tifrunner.gnm1.ann1.0HJ3TW Arachis hypogaea HOM05D000827 ORTHO05D001576 3.1e-13 79.0 56 71.4
arahy.Tifrunner.gnm1.ann1.PC5DAD Arachis hypogaea HOM05D000827 ORTHO05D001576 3.1e-13 79.0 56 71.4
Gohir.A10G009300 Gossypium hirsutum HOM05D000827 ORTHO05D001576 3.1e-13 79.0 90 55.6
Gohir.D10G009000 Gossypium hirsutum HOM05D000827 ORTHO05D001576 7.0e-13 77.8 90 54.4
Gorai.011G009800 Gossypium raimondii HOM05D000827 ORTHO05D001576 7.0e-13 77.8 90 54.4
Solyc11g012290.2 Solanum lycopersicum HOM05D000827 ORTHO05D001576 7.0e-13 77.8 87 54.0
Sopen11g007070 Solanum pennellii HOM05D000827 ORTHO05D001576 7.0e-13 77.8 87 54.0
Oeu009392.1 Olea europaea HOM05D000827 ORTHO05D001576 1.6e-12 76.6 109 50.5
PGSC0003DMG400013280 Solanum tuberosum HOM05D000827 ORTHO05D001576 2.6e-12 75.9 92 53.3
CANSAT56G2793 Cannabis sativa HOM05D000827 ORTHO05D001576 4.5e-12 75.1 102 52.0
Lj4g0007136 Lotus japonicus HOM05D000827 ORTHO05D001576 4.5e-12 75.1 60 63.3
Sc05g0009600 Simmondsia chinensis HOM05D000827 ORTHO05D001576 4.5e-12 75.1 87 52.9
TWI38G1318 Tripterygium wilfordii HOM05D000827 ORTHO05D001576 4.5e-12 75.1 127 45.7
C03p84120 Brassica napus HOM05D000827 ORTHO05D001576 5.9e-12 74.7 80 51.2
MSTRG.7167 Avicennia marina HOM05D000827 ORTHO05D001576 7.7e-12 74.3 111 46.8
Thhalv10025487m.g Eutrema salsugineum HOM05D000827 ORTHO05D001576 7.7e-12 74.3 116 40.5
Prupe.4G010100 Prunus persica HOM05D000827 ORTHO05D001576 7.7e-12 74.3 107 50.5
Oeu007168.3 Olea europaea HOM05D000827 ORTHO05D001576 1.0e-11 73.9 83 54.2
Potri.006G010700 Populus trichocarpa HOM05D000827 ORTHO05D001576 1.0e-11 73.9 60 63.3
QL05p069625 Quercus lobata HOM05D000827 ORTHO05D001576 1.0e-11 73.9 60 65.0
Sabra16G0002000 Salix brachista HOM05D000827 ORTHO05D001576 1.0e-11 73.9 60 63.3
Sabra16G0016000 Salix brachista HOM05D000827 ORTHO05D001576 1.0e-11 73.9 60 63.3
Cpa.g.sc75.114 Carica papaya HOM05D000827 ORTHO05D001576 1.7e-11 73.2 129 39.5
CiPaw.09G102600 Carya illinoinensis HOM05D000827 ORTHO05D001576 1.7e-11 73.2 91 49.5
Ciclev10015752m.g Citrus clementina HOM05D000827 ORTHO05D001576 1.7e-11 73.2 107 49.5
THA.LOC104806331 Tarenaya hassleriana HOM05D000827 ORTHO05D001576 1.7e-11 73.2 105 45.7
FAN25G2911 Fragaria x ananassa HOM05D000827 ORTHO05D001576 2.2e-11 72.8 127 43.3
FAN21G1683 Fragaria x ananassa HOM05D000827 ORTHO05D001576 2.9e-11 72.4 145 42.1
Potri.016G013400 Populus trichocarpa HOM05D000827 ORTHO05D001576 2.9e-11 72.4 60 63.3
Sabra06G0008800 Salix brachista HOM05D000827 ORTHO05D001576 2.9e-11 72.4 111 41.4
CiPaw.10G078100 Carya illinoinensis HOM05D000827 ORTHO05D001576 6.5e-11 71.2 96 49.0
Carub.0007s1894 Capsella rubella HOM05D000827 ORTHO05D001576 8.5e-11 70.9 60 58.3
CAN.G1186.42 Capsicum annuum HOM05D000827 ORTHO05D001576 8.5e-11 70.9 60 66.7
Migut.M01398 Erythranthe guttata HOM05D000827 ORTHO05D001576 8.5e-11 70.9 124 44.4
Manes.08G070900 Manihot esculenta HOM05D000827 ORTHO05D001576 8.5e-11 70.9 60 61.7
Atru.chr1.2445 Acer truncatum HOM05D000827 ORTHO05D001576 1.1e-10 70.5 60 61.7
BraA03t14415Z Brassica rapa HOM05D000827 ORTHO05D001576 1.1e-10 70.5 139 37.4
C01p16630 Brassica napus HOM05D000827 ORTHO05D001576 1.5e-10 70.1 80 48.8
C07p51820 Brassica napus HOM05D000827 ORTHO05D001576 1.5e-10 70.1 113 39.8
BolC7t45684H Brassica oleracea HOM05D000827 ORTHO05D001576 1.5e-10 70.1 113 39.8
CARHR229270 Cardamine hirsuta HOM05D000827 ORTHO05D001576 1.5e-10 70.1 63 58.7
BcaNung02498 Brassica carinata HOM05D000827 ORTHO05D001576 1.9e-10 69.7 114 39.5
RcHm_v2.0_Chr5g0001471 Rosa chinensis HOM05D000827 ORTHO05D001576 1.9e-10 69.7 112 45.5
AL7G31250 Arabidopsis lyrata HOM05D000827 ORTHO05D001576 2.5e-10 69.3 63 57.1
Sp7g20490 Schrenkiella parvula HOM05D000827 ORTHO05D001576 2.5e-10 69.3 63 57.1
A03p53490 Brassica napus HOM05D000827 ORTHO05D001576 3.2e-10 68.9 60 58.3
AT4G22360 Arabidopsis thaliana HOM05D000827 ORTHO05D001576 4.2e-10 68.6 63 54.0
BolC3t20691H Brassica oleracea HOM05D000827 ORTHO05D001576 4.2e-10 68.6 98 44.9
FvH4_3g00950 Fragaria vesca HOM05D000827 ORTHO05D001576 4.2e-10 68.6 123 45.5
Manes.09G076605 Manihot esculenta HOM05D000827 ORTHO05D001576 4.2e-10 68.6 138 38.4
SGA_v2.0_scaffold4G01873 Striga asiatica HOM05D000827 ORTHO05D001576 4.2e-10 68.6 87 48.3
COL.COLO4_31888 Corchorus olitorius HOM05D000827 ORTHO05D001576 5.5e-10 68.2 56 60.7
PGR042G2655 Punica granatum HOM05D000827 ORTHO05D001576 5.5e-10 68.2 74 55.4
SalBow8G2601 Salvia bowleyana HOM05D000827 ORTHO05D001576 5.5e-10 68.2 130 42.3
BolC1t01610H Brassica oleracea HOM05D000827 ORTHO05D001576 1.2e-09 67.0 63 54.0
BraA01t01317Z Brassica rapa HOM05D000827 ORTHO05D001576 1.2e-09 67.0 80 47.5
Nitab4.5_0000143g0210 Nicotiana tabacum HOM05D000827 ORTHO05D001576 1.2e-09 67.0 63 58.7
A01p13720 Brassica napus HOM05D000827 ORTHO05D001576 1.6e-09 66.6 80 47.5
BcaC01g00773 Brassica carinata HOM05D000827 ORTHO05D001576 2.1e-09 66.2 103 46.6
BcaB03g11728 Brassica carinata HOM05D000827 ORTHO05D001576 2.7e-09 65.9 56 58.9
Actinidia00107 Actinidia chinensis HOM05D000827 ORTHO05D001576 8.0e-09 64.3 93 44.1
A08p15670 Brassica napus HOM05D000827 ORTHO05D001576 8.0e-09 64.3 142 35.2
BraA08t33547Z Brassica rapa HOM05D000827 ORTHO05D001576 8.0e-09 64.3 142 35.2
Aa31LG6G4460 Aethionema arabicum HOM05D000827 ORTHO05D001576 1.0e-08 63.9 63 54.0
HPP92_015775 Vanilla planifolia HOM05D000827 ORTHO05D001576 1.4e-08 63.5 58 56.9
Aqoxy1G04064 Aquilegia oxysepala HOM05D000827 ORTHO05D001576 5.2e-08 61.6 73 53.4
Cc05_g14490 Coffea canephora HOM05D000827 ORTHO05D001576 5.2e-08 61.6 105 38.1
Ah.06g181580 Amaranthus hybridus HOM05D000827 ORTHO05D001576 1.2e-07 60.5 62 48.4
EL10Ac4g07640 Beta vulgaris HOM05D000827 ORTHO05D001576 1.5e-07 60.1 61 47.5
Rhsim06G0225300 Rhododendron simsii HOM05D000827 ORTHO05D001576 1.5e-07 60.1 129 36.4
Hma1.2p1_1199F.1_g266370 Hydrangea macrophylla HOM05D000827 ORTHO05D001576 2.6e-07 59.3 122 38.5
CSS0028661 Camellia sinensis var. sinensis HOM05D000827 ORTHO05D001576 3.3e-07 58.9 61 54.1
Glyma.08G324000 Glycine max HOM05D000827 ORTHO05D001576 3.3e-07 58.9 94 38.3
Hund01936 Selenicereus undatus HOM05D000827 ORTHO05D001576 3.3e-07 58.9 61 49.2
DCAR_022598 Daucus carota HOM05D000827 ORTHO05D001576 5.7e-07 58.2 118 40.7
Zm00001eb433030 Zea mays HOM05D000827 ORTHO05D022146 5.7e-07 58.2 110 40.9
AUR62015922 Chenopodium quinoa HOM05D000827 ORTHO05D001576 9.7e-07 57.4 111 36.0
Phvul.006G049900 Phaseolus vulgaris HOM05D000827 ORTHO05D001576 1.7e-06 56.6 113 37.2
CiPaw.11G196600 Carya illinoinensis HOM05D000827 ORTHO05D001576 3.7e-06 55.5 113 38.9
Hma1.2p1_0036F.1_g022970 Hydrangea macrophylla HOM05D000827 ORTHO05D001576 3.7e-06 55.5 127 33.9
Peaxi162Scf00352g00212 Petunia axillaris HOM05D000827 ORTHO05D001576 3.7e-06 55.5 45 62.2
Lsat_1_v5_gn_4_62081 Lactuca sativa HOM05D000827 ORTHO05D001576 6.3e-06 54.7 56 51.8
Actinidia05051 Actinidia chinensis HOM05D000827 ORTHO05D001576 8.2e-06 54.3 95 38.9
Lj1A883T37 Lonicera japonica HOM05D000827 ORTHO05D001576 8.2e-06 54.3 100 40.0
VMungo0540G1308 Vigna mungo HOM05D000827 ORTHO05D001576 8.2e-06 54.3 96 37.5


User provided reference genes

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