Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2744 Ceratophyllum demersum HOM05D002186 ORTHO05D002225 1.6e-123 446.0 221 100.0
CDE06G1222 Ceratophyllum demersum HOM05D002186 ORTHO05D002225 3.3e-100 368.6 219 82.2
Lalb_Chr12g0209931 Lupinus albus HOM05D002186 ORTHO05D002225 3.9e-16 89.4 245 31.8
Lsat_1_v5_gn_9_15261 Lactuca sativa HOM05D002186 ORTHO05D002225 1.9e-15 87.0 244 30.3
TAR636G0289 Trochodendron aralioides HOM05D002186 ORTHO05D002225 5.6e-15 85.5 265 29.1
HanXRQChr10g0279471 Helianthus annuus HOM05D002186 ORTHO05D002225 7.3e-15 85.1 246 29.3
CiPaw.02G022900 Carya illinoinensis HOM05D002186 ORTHO05D002225 2.1e-14 83.6 250 32.4
MD10G1160600 Malus domestica HOM05D002186 ORTHO05D002225 2.1e-14 83.6 246 33.3
Prupe.8G199800 Prunus persica HOM05D002186 ORTHO05D002225 3.6e-14 82.8 254 29.9
BraA03t13533Z Brassica rapa HOM05D002186 ORTHO05D002225 6.2e-14 82.0 228 31.6
HanXRQChr07g0189521 Helianthus annuus HOM05D002186 ORTHO05D002225 6.2e-14 82.0 245 28.6
Lalb_Chr01g0022231 Lupinus albus HOM05D002186 ORTHO05D002225 6.2e-14 82.0 242 33.5
BcaC01g03246 Brassica carinata HOM05D002186 ORTHO05D002225 1.4e-13 80.9 228 30.3
A03p44020 Brassica napus HOM05D002186 ORTHO05D002225 1.4e-13 80.9 228 31.1
QL09p051777 Quercus lobata HOM05D002186 ORTHO05D002225 1.4e-13 80.9 268 31.3
C03p54390 Brassica napus HOM05D002186 ORTHO05D002225 3.1e-13 79.7 229 29.7
BolC3t17726H Brassica oleracea HOM05D002186 ORTHO05D002225 3.1e-13 79.7 229 29.7
QL09p052490 Quercus lobata HOM05D002186 ORTHO05D002225 5.2e-13 79.0 268 31.0
Ciclev10021726m.g Citrus clementina HOM05D002186 ORTHO05D002225 8.9e-13 78.2 267 29.6
Manes.13G048800 Manihot esculenta HOM05D002186 ORTHO05D002225 1.5e-12 77.4 272 32.4
Medtr8g012960 Medicago truncatula HOM05D002186 ORTHO05D002225 1.5e-12 77.4 261 29.9
VMungo0331G2000 Vigna mungo HOM05D002186 ORTHO05D002225 1.5e-12 77.4 249 30.1
arahy.Tifrunner.gnm1.ann1.L384WR Arachis hypogaea HOM05D002186 ORTHO05D002225 2.0e-12 77.0 250 31.2
AL3G40780 Arabidopsis lyrata HOM05D002186 ORTHO05D002225 2.6e-12 76.6 226 30.5
Actinidia31462 Actinidia chinensis HOM05D002186 ORTHO05D002225 3.4e-12 76.3 264 31.1
COL.COLO4_15629 Corchorus olitorius HOM05D002186 ORTHO05D002225 3.4e-12 76.3 273 30.8
Eucgr.K02142 Eucalyptus grandis HOM05D002186 ORTHO05D002225 3.4e-12 76.3 266 30.1
AT3G25070 Arabidopsis thaliana HOM05D002186 ORTHO05D002225 4.4e-12 75.9 226 30.1
RcHm_v2.0_Chr6g0284211 Rosa chinensis HOM05D002186 ORTHO05D002225 4.4e-12 75.9 251 31.1
arahy.Tifrunner.gnm1.ann1.RP0H42 Arachis hypogaea HOM05D002186 ORTHO05D002225 5.8e-12 75.5 247 32.0
CARHR101410 Cardamine hirsuta HOM05D002186 ORTHO05D002225 5.8e-12 75.5 231 29.4
Glyma.03G084000 Glycine max HOM05D002186 ORTHO05D002225 5.8e-12 75.5 249 31.3
Ca_23229_v3 Cicer arietinum L. HOM05D002186 ORTHO05D002225 7.6e-12 75.1 261 29.9
Glyma.16G090700 Glycine max HOM05D002186 ORTHO05D002225 9.9e-12 74.7 251 31.1
Carub.0003s2542 Capsella rubella HOM05D002186 ORTHO05D002225 1.3e-11 74.3 226 30.1
MD05G1172400 Malus domestica HOM05D002186 ORTHO05D002225 1.3e-11 74.3 247 30.4
THA.LOC104821655 Tarenaya hassleriana HOM05D002186 ORTHO05D002225 1.3e-11 74.3 231 29.9
ECA247G1857 Erigeron canadensis HOM05D002186 ORTHO05D002225 1.7e-11 73.9 249 31.7
Medtr7g056147 Medicago truncatula HOM05D002186 ORTHO05D002225 1.7e-11 73.9 249 31.7
Thecc.01G221600 Theobroma cacao HOM05D002186 ORTHO05D002225 1.7e-11 73.9 277 28.5
GSVIVG01004747001 Vitis vinifera HOM05D002186 ORTHO05D002225 1.7e-11 73.9 219 29.7
FvH4_2g18650 Fragaria vesca HOM05D002186 ORTHO05D002225 2.2e-11 73.6 253 29.2
FAN24G2024 Fragaria x ananassa HOM05D002186 ORTHO05D002225 2.2e-11 73.6 253 29.2
TPR.G17116 Trifolium pratense HOM05D002186 ORTHO05D002225 2.2e-11 73.6 253 30.8
Lj3g0021651 Lotus japonicus HOM05D002186 ORTHO05D002225 2.9e-11 73.2 253 32.4
BcaB08g34432 Brassica carinata HOM05D002186 ORTHO05D002225 4.9e-11 72.4 224 29.5
CANSAT01G1734 Cannabis sativa HOM05D002186 ORTHO05D002225 4.9e-11 72.4 258 30.2
Psat0s3432g0160 Pisum sativum HOM05D002186 ORTHO05D002225 6.4e-11 72.0 260 30.8
Ca_06555_v3 Cicer arietinum L. HOM05D002186 ORTHO05D002225 8.4e-11 71.6 264 29.9
Potri.002G245400 Populus trichocarpa HOM05D002186 ORTHO05D002225 8.4e-11 71.6 265 26.8
FAN15G3260 Fragaria x ananassa HOM05D002186 ORTHO05D002225 1.1e-10 71.2 253 28.9
Nn3g20042 Nelumbo nucifera HOM05D002186 ORTHO05D002225 1.1e-10 71.2 262 27.5
TWI18G0470 Tripterygium wilfordii HOM05D002186 ORTHO05D002225 1.1e-10 71.2 274 26.6
Aqoxy1G04163 Aquilegia oxysepala HOM05D002186 ORTHO05D002225 1.4e-10 70.9 247 31.2
Sabra02G0186700 Salix brachista HOM05D002186 ORTHO05D002225 1.4e-10 70.9 265 29.1
DCAR_004726 Daucus carota HOM05D002186 ORTHO05D002225 1.9e-10 70.5 261 30.3
Phvul.010G021200 Phaseolus vulgaris HOM05D002186 ORTHO05D002225 1.9e-10 70.5 252 29.0
Actinidia30059 Actinidia chinensis HOM05D002186 ORTHO05D002225 3.2e-10 69.7 216 31.5
FAN27G2350 Fragaria x ananassa HOM05D002186 ORTHO05D002225 3.2e-10 69.7 256 30.5
Nn1g07944 Nelumbo nucifera HOM05D002186 ORTHO05D002225 3.2e-10 69.7 265 29.1
CiPaw.01G049400 Carya illinoinensis HOM05D002186 ORTHO05D002225 4.1e-10 69.3 274 29.6
Dinv13953 Davidia involucrata HOM05D002186 ORTHO05D002225 5.4e-10 68.9 237 26.6
Sp3g22670 Schrenkiella parvula HOM05D002186 ORTHO05D002225 5.4e-10 68.9 224 28.6
Hma1.2p1_0149F.1_g066350 Hydrangea macrophylla HOM05D002186 ORTHO05D002225 7.1e-10 68.6 228 28.5
Haze_15037 Corylus avellana HOM05D002186 ORTHO05D002225 9.2e-10 68.2 259 28.2
HPP92_008217 Vanilla planifolia HOM05D002186 ORTHO05D002225 9.2e-10 68.2 257 27.6
Atru.chr6.1419 Acer truncatum HOM05D002186 ORTHO05D002225 1.2e-09 67.8 258 28.7
Manes.12G046800 Manihot esculenta HOM05D002186 ORTHO05D002225 1.2e-09 67.8 267 28.1
Oeu002753.1 Olea europaea HOM05D002186 ORTHO05D002225 1.6e-09 67.4 214 29.0
SGA_v2.0_scaffold6G03221 Striga asiatica HOM05D002186 ORTHO05D002225 1.6e-09 67.4 243 28.4
Gohir.D08G212670 Gossypium hirsutum HOM05D002186 ORTHO05D002225 2.1e-09 67.0 262 27.5
Gohir.A08G195300 Gossypium hirsutum HOM05D002186 ORTHO05D002225 2.7e-09 66.6 264 28.0
Gorai.004G226600 Gossypium raimondii HOM05D002186 ORTHO05D002225 4.6e-09 65.9 262 27.1
TPR.G6437 Trifolium pratense HOM05D002186 ORTHO05D002225 4.6e-09 65.9 258 29.1
Lalb_Chr19g0125811 Lupinus albus HOM05D002186 ORTHO05D002225 6.0e-09 65.5 217 30.0
THA.LOC104808790 Tarenaya hassleriana HOM05D002186 ORTHO05D002225 6.0e-09 65.5 226 29.6
Actinidia26875 Actinidia chinensis HOM05D002186 ORTHO05D002225 7.8e-09 65.1 220 30.0
CSS0016957 Camellia sinensis var. sinensis HOM05D002186 ORTHO05D002225 7.8e-09 65.1 223 29.6
CSS0037554 Camellia sinensis var. sinensis HOM05D002186 ORTHO05D002225 7.8e-09 65.1 223 29.6
Duzib133G1090 Durio zibethinus HOM05D002186 ORTHO05D002225 7.8e-09 65.1 263 27.4
Oeu031828.1 Olea europaea HOM05D002186 ORTHO05D002225 7.8e-09 65.1 243 28.0
Duzib211G0360 Durio zibethinus HOM05D002186 ORTHO05D002225 1.3e-08 64.3 277 28.2
MBI11_g07441_MAGBIO Magnolia biondii HOM05D002186 ORTHO05D002225 1.3e-08 64.3 255 27.1
Lsat_1_v5_gn_2_46760 Lactuca sativa HOM05D002186 ORTHO05D002225 1.7e-08 63.9 202 30.2
Psat3g148160 Pisum sativum HOM05D002186 ORTHO05D002225 2.3e-08 63.5 225 32.4
ATR1128G106 Amborella trichopoda HOM05D002186 ORTHO05D002225 3.0e-08 63.2 204 29.9
BcaB06g26730 Brassica carinata HOM05D002186 ORTHO05D002225 3.0e-08 63.2 227 28.6
Migut.G00732 Erythranthe guttata HOM05D002186 ORTHO05D002225 3.0e-08 63.2 276 24.6
Nitab4.5_0000143g0470 Nicotiana tabacum HOM05D002186 ORTHO05D002225 3.9e-08 62.8 212 28.8
Rhsim01G0254100 Rhododendron simsii HOM05D002186 ORTHO05D002225 3.9e-08 62.8 279 28.3
Aqoxy2G03899 Aquilegia oxysepala HOM05D002186 ORTHO05D002225 5.1e-08 62.4 260 26.5
TAR624G0352 Trochodendron aralioides HOM05D002186 ORTHO05D002225 5.1e-08 62.4 255 27.1
Manes.11G000100 Manihot esculenta HOM05D002186 ORTHO05D002225 6.6e-08 62.0 226 26.5
Atru.chr1.2496 Acer truncatum HOM05D002186 ORTHO05D002225 8.6e-08 61.6 219 28.3
Actinidia09472 Actinidia chinensis HOM05D002186 ORTHO05D002225 8.6e-08 61.6 261 26.1
Aa31LG8G11940 Aethionema arabicum HOM05D002186 ORTHO05D002225 8.6e-08 61.6 219 28.8
ECA234G1762 Erigeron canadensis HOM05D000014 ORTHO05D000093 8.6e-08 61.6 219 26.0
Gohir.A07G199700 Gossypium hirsutum HOM05D002186 ORTHO05D002225 8.6e-08 61.6 265 29.1
Gohir.D07G206100 Gossypium hirsutum HOM05D002186 ORTHO05D002225 8.6e-08 61.6 268 29.1
Migut.N00628 Erythranthe guttata HOM05D002186 ORTHO05D002225 1.1e-07 61.2 247 26.7
PSO210G1922 Papaver somniferum HOM05D002186 ORTHO05D002225 1.1e-07 61.2 202 29.2
Dinv07382 Davidia involucrata HOM05D002186 ORTHO05D002225 1.5e-07 60.8 227 25.6
HanXRQChr16g0498991 Helianthus annuus HOM05D002186 ORTHO05D002225 1.5e-07 60.8 233 26.6
PGR004G2124 Punica granatum HOM05D002186 ORTHO05D002225 1.5e-07 60.8 225 27.1
TWI63G0207 Tripterygium wilfordii HOM05D002186 ORTHO05D002225 1.5e-07 60.8 219 26.5
TAR362G1062 Trochodendron aralioides HOM05D002186 ORTHO05D002225 1.5e-07 60.8 276 26.4
HPP92_020221 Vanilla planifolia HOM05D002186 ORTHO05D002225 1.5e-07 60.8 254 24.8
Duzib138G0625 Durio zibethinus HOM05D002186 ORTHO05D002225 1.9e-07 60.5 278 27.7
SalBow8G0144 Salvia bowleyana HOM05D002186 ORTHO05D002225 1.9e-07 60.5 207 28.5
Peaxi162Scf00558g00012 Petunia axillaris HOM05D002186 ORTHO05D002225 3.3e-07 59.7 219 27.4
ClCG09G008810 Citrullus lanatus HOM05D002186 ORTHO05D002225 4.3e-07 59.3 233 29.2
Peaxi162Scf00238g00037 Petunia axillaris HOM05D002186 ORTHO05D002225 4.3e-07 59.3 289 24.6
PSO017G2014 Papaver somniferum HOM05D002186 ORTHO05D002225 5.6e-07 58.9 265 26.4
TWI36G0241 Tripterygium wilfordii HOM05D002186 ORTHO05D002225 5.6e-07 58.9 267 27.7
Zm00001eb210800 Zea mays HOM05D002186 ORTHO05D002225 5.6e-07 58.9 236 29.7
Gorai.001G232400 Gossypium raimondii HOM05D002186 ORTHO05D002225 7.3e-07 58.5 227 29.1
PSO832G0516 Papaver somniferum HOM05D002186 ORTHO05D002225 7.3e-07 58.5 230 27.0
Sed0008860 Sechium edule HOM05D002186 ORTHO05D002225 9.6e-07 58.2 222 28.4
unitig_746.g26591 Utricularia gibba HOM05D002186 ORTHO05D002225 9.6e-07 58.2 256 26.6
Cc09_g01050 Coffea canephora HOM05D002186 ORTHO05D002225 1.2e-06 57.8 192 29.2
Potri.011G022000 Populus trichocarpa HOM05D002186 ORTHO05D002225 1.2e-06 57.8 221 25.3
Eucgr.D01380 Eucalyptus grandis HOM05D002186 ORTHO05D002225 1.6e-06 57.4 203 28.1
Gohir.A06G152300 Gossypium hirsutum HOM05D002186 ORTHO05D002225 1.6e-06 57.4 189 29.6
Aa31LG9G4910 Aethionema arabicum HOM05D002186 ORTHO05D002225 2.1e-06 57.0 204 27.5
Nitab4.5_0003020g0010 Nicotiana tabacum HOM05D002186 ORTHO05D002225 2.1e-06 57.0 213 25.8
PSO063G5024 Papaver somniferum HOM05D002186 ORTHO05D002225 2.8e-06 56.6 261 27.2
Phvul.006G144600 Phaseolus vulgaris HOM05D002186 ORTHO05D002225 2.8e-06 56.6 238 25.2
PGR044G0352 Punica granatum HOM05D002186 ORTHO05D002225 2.8e-06 56.6 284 26.1
SGA_v2.0_scaffold18G08332 Striga asiatica HOM05D002186 ORTHO05D002225 2.8e-06 56.6 223 25.6
Dinv12658 Davidia involucrata HOM05D002186 ORTHO05D002225 3.6e-06 56.2 153 33.3
Gohir.D06G158600 Gossypium hirsutum HOM05D002186 ORTHO05D002225 4.7e-06 55.8 186 29.0
Ca_00708_v3 Cicer arietinum L. HOM05D000967 ORTHO05D000796 6.2e-06 55.5 235 26.4
Lj2A1127T51 Lonicera japonica HOM05D002186 ORTHO05D002225 6.2e-06 55.5 236 27.5
Solyc11g012010.2 Solanum lycopersicum HOM05D002186 ORTHO05D002225 6.2e-06 55.5 240 27.1


User provided reference genes

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