Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G0742 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 8.2e-194 680.2 355 100.0
CDE11G1022 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 9.9e-123 444.1 379 66.8
Nn6g33714 Nelumbo nucifera HOM05D005771 ORTHO05D007173 5.2e-79 298.9 348 49.7
Dinv25170 Davidia involucrata HOM05D005771 ORTHO05D007173 4.5e-75 285.8 387 46.8
Prupe.5G050200 Prunus persica HOM05D005771 ORTHO05D007173 7.7e-75 285.0 350 48.6
TAR629G1255 Trochodendron aralioides HOM05D005771 ORTHO05D007173 7.7e-75 285.0 345 48.4
Cfa012362 Carpinus fangiana HOM05D005771 ORTHO05D007173 7.2e-73 278.5 376 44.7
CiPaw.11G085900 Carya illinoinensis HOM05D005771 ORTHO05D007173 6.1e-72 275.4 375 45.1
PGR031G0896 Punica granatum HOM05D005771 ORTHO05D007173 1.0e-71 274.6 346 46.5
MD06G1043400 Malus domestica HOM05D005771 ORTHO05D007173 2.3e-71 273.5 349 46.1
Potri.001G148500 Populus trichocarpa HOM05D005771 ORTHO05D007173 1.5e-70 270.8 390 45.4
CANSAT21G2176 Cannabis sativa HOM05D005771 ORTHO05D007173 5.7e-70 268.9 347 45.8
RcHm_v2.0_Chr7g0207891 Rosa chinensis HOM05D005771 ORTHO05D007173 7.5e-70 268.5 346 46.0
Hma1.2p1_0414F.1_g147560 Hydrangea macrophylla HOM05D005771 ORTHO05D007173 1.3e-69 267.7 345 48.4
MD16G1267400 Malus domestica HOM05D005771 ORTHO05D007173 2.2e-69 266.9 353 46.7
Atru.chr9.1139 Acer truncatum HOM05D005771 ORTHO05D007173 2.8e-69 266.5 349 46.7
Potri.003G085901 Populus trichocarpa HOM05D005771 ORTHO05D007173 3.7e-69 266.2 390 44.4
ClCG10G001970 Citrullus lanatus HOM05D005771 ORTHO05D007173 1.1e-68 264.6 349 46.4
arahy.Tifrunner.gnm1.ann1.2CCA8K Arachis hypogaea HOM05D005771 ORTHO05D007173 1.6e-67 260.8 342 45.0
arahy.Tifrunner.gnm1.ann1.X1SA4Y Arachis hypogaea HOM05D005771 ORTHO05D007173 1.6e-67 260.8 342 45.0
Ca_22032_v3 Cicer arietinum L. HOM05D005771 ORTHO05D007173 2.0e-67 260.4 366 45.4
Eucgr.D02148 Eucalyptus grandis HOM05D005771 ORTHO05D007173 3.5e-67 259.6 345 44.3
Gorai.009G296800 Gossypium raimondii HOM05D005771 ORTHO05D007173 3.5e-67 259.6 347 44.4
Actinidia31481 Actinidia chinensis HOM05D005771 ORTHO05D007173 4.5e-67 259.2 344 45.1
Gohir.D05G283033 Gossypium hirsutum HOM05D005771 ORTHO05D007173 4.5e-67 259.2 344 44.5
Lalb_Chr16g0386311 Lupinus albus HOM05D005771 ORTHO05D007173 1.3e-66 257.7 349 44.4
Ciclev10020716m.g Citrus clementina HOM05D005771 ORTHO05D007173 5.0e-66 255.8 383 43.1
Sopen08g026040 Solanum pennellii HOM05D005771 ORTHO05D007173 5.0e-66 255.8 344 44.2
Lj4g0020972 Lotus japonicus HOM05D005771 ORTHO05D007173 8.6e-66 255.0 345 42.9
Nitab4.5_0001444g0090 Nicotiana tabacum HOM05D005771 ORTHO05D007173 1.5e-65 254.2 361 44.9
CiPaw.12G058800 Carya illinoinensis HOM05D005771 ORTHO05D007173 2.5e-65 253.4 344 44.5
Lalb_Chr05g0220751 Lupinus albus HOM05D005771 ORTHO05D007173 2.5e-65 253.4 343 44.0
Solyc08g077450.4 Solanum lycopersicum HOM05D005771 ORTHO05D007173 4.2e-65 252.7 344 44.2
Duzib106G1532 Durio zibethinus HOM05D005771 ORTHO05D007173 7.2e-65 251.9 356 44.4
FvH4_5g20870 Fragaria vesca HOM05D005771 ORTHO05D007173 7.2e-65 251.9 346 42.5
CsaV3_3G002100 Cucumis sativus L. HOM05D005771 ORTHO05D007173 1.2e-64 251.1 353 42.8
Gohir.A10G183200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 1.2e-64 251.1 346 44.5
Gorai.011G213100 Gossypium raimondii HOM05D005771 ORTHO05D007173 1.2e-64 251.1 346 44.8
Medtr4g099070 Medicago truncatula HOM05D005771 ORTHO05D007173 1.2e-64 251.1 360 44.7
Manes.15G171600 Manihot esculenta HOM05D005771 ORTHO05D007173 1.6e-64 250.8 350 43.1
QL12p007731 Quercus lobata HOM05D005771 ORTHO05D007173 2.1e-64 250.4 349 44.1
Gohir.A05G281200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 2.8e-64 250.0 343 43.4
Thecc.10G165100 Theobroma cacao HOM05D005771 ORTHO05D007173 2.8e-64 250.0 350 43.4
Haze_08321 Corylus avellana HOM05D005771 ORTHO05D007173 3.6e-64 249.6 434 39.2
Glyma.17G150800 Glycine max HOM05D005771 ORTHO05D007173 3.6e-64 249.6 349 42.7
Nitab4.5_0001708g0070 Nicotiana tabacum HOM05D005771 ORTHO05D007173 6.1e-64 248.8 364 44.0
Gohir.D10G190000 Gossypium hirsutum HOM05D005771 ORTHO05D007173 1.0e-63 248.1 346 44.8
Lj2g0023107 Lotus japonicus HOM05D005771 ORTHO05D007173 1.4e-63 247.7 358 44.1
Migut.E00807 Erythranthe guttata HOM05D005771 ORTHO05D007173 1.8e-63 247.3 361 43.5
Migut.E00856 Erythranthe guttata HOM05D005771 ORTHO05D007173 2.3e-63 246.9 362 43.1
Oeu006260.1 Olea europaea HOM05D005771 ORTHO05D007173 2.3e-63 246.9 372 42.5
TPR.G11182 Trifolium pratense HOM05D005771 ORTHO05D007173 2.3e-63 246.9 396 40.7
Phvul.003G227100 Phaseolus vulgaris HOM05D005771 ORTHO05D007173 3.0e-63 246.5 356 42.1
Cc08_g01580 Coffea canephora HOM05D005771 ORTHO05D007173 8.9e-63 245.0 358 43.6
Sed0018056 Sechium edule HOM05D005771 ORTHO05D007173 1.2e-62 244.6 354 43.5
Glyma.05G068200 Glycine max HOM05D005771 ORTHO05D007173 3.4e-62 243.0 353 44.2
FAN08G3334 Fragaria x ananassa HOM05D005771 ORTHO05D007173 5.7e-62 242.3 356 41.3
FAN18G3681 Fragaria x ananassa HOM05D005771 ORTHO05D007173 5.7e-62 242.3 356 41.0
Hund11296 Selenicereus undatus HOM05D005771 ORTHO05D007173 7.5e-62 241.9 344 42.4
Actinidia10872 Actinidia chinensis HOM05D005771 ORTHO05D007173 9.8e-62 241.5 350 43.1
Aqoxy3G02583 Aquilegia oxysepala HOM05D005771 ORTHO05D007173 1.7e-61 240.7 348 44.8
MELO3C013882.2 Cucumis melo HOM05D005771 ORTHO05D007173 3.7e-61 239.6 388 39.9
MSTRG.1962 Avicennia marina HOM05D005771 ORTHO05D007173 4.9e-61 239.2 354 43.5
TWI81G0410 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 1.1e-60 238.0 368 41.0
FAN04G1778 Fragaria x ananassa HOM05D005771 ORTHO05D007173 1.4e-60 237.7 354 41.2
CSS0003087 Camellia sinensis var. sinensis HOM05D005771 ORTHO05D007173 2.4e-60 236.9 343 42.3
COL.COLO4_05118 Corchorus olitorius HOM05D005771 ORTHO05D007173 7.0e-60 235.3 347 42.4
TWI60G1113 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 9.2e-60 235.0 364 39.8
SGA_v2.0_scaffold20G09242 Striga asiatica HOM05D005771 ORTHO05D007173 3.9e-58 229.6 360 41.1
DCAR_000726 Daucus carota HOM05D005771 ORTHO05D007173 1.5e-57 227.6 308 45.8
HanXRQChr12g0368601 Helianthus annuus HOM05D005771 ORTHO05D007173 4.3e-57 226.1 352 42.3
GSVIVG01013265001 Vitis vinifera HOM05D005771 ORTHO05D007173 5.6e-57 225.7 146 76.0
Sc01g0007800 Simmondsia chinensis HOM05D005771 ORTHO05D007173 4.7e-56 222.6 342 41.2
DCAR_000728 Daucus carota HOM05D005771 ORTHO05D007173 6.1e-56 222.2 292 45.9
ATR0829G207 Amborella trichopoda HOM05D005771 ORTHO05D007173 1.1e-52 211.5 337 41.2
AT1G32730 Arabidopsis thaliana HOM05D005771 ORTHO05D007173 2.4e-52 210.3 367 38.7
CARHR032110 Cardamine hirsuta HOM05D005771 ORTHO05D007173 3.2e-52 209.9 310 42.3
AL1G47010 Arabidopsis lyrata HOM05D005771 ORTHO05D007173 4.1e-52 209.5 341 40.2
ECA233G5206 Erigeron canadensis HOM05D005771 ORTHO05D007173 1.6e-51 207.6 344 40.4
Thhalv10008194m.g Eutrema salsugineum HOM05D005771 ORTHO05D007173 2.7e-51 206.8 371 38.0
Lsat_1_v5_gn_6_67960 Lactuca sativa HOM05D005771 ORTHO05D007173 1.0e-50 204.9 287 43.9
HPP92_007338 Vanilla planifolia HOM05D005771 ORTHO05D007173 2.3e-50 203.8 343 41.4
Aa31LG2G13250 Aethionema arabicum HOM05D005771 ORTHO05D007173 6.6e-50 202.2 368 38.6
PSO063G1478 Papaver somniferum HOM05D005771 ORTHO05D007173 1.5e-49 201.1 348 40.5
Sabra03G0055800 Salix brachista HOM05D005771 ORTHO05D007173 1.5e-49 201.1 431 37.6
THA.LOC104807943 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 1.9e-49 200.7 353 38.8
Cpa.g.sc2.371 Carica papaya HOM05D005771 ORTHO05D007173 7.3e-49 198.7 313 41.2
C05p32200 Brassica napus HOM05D005771 ORTHO05D007173 1.2e-48 198.0 377 37.9
BolC5t31952H Brassica oleracea HOM05D005771 ORTHO05D007173 1.2e-48 198.0 377 37.9
Rhsim07G0120600 Rhododendron simsii HOM05D005771 ORTHO05D007173 4.7e-48 196.1 309 42.4
PSO782G3090 Papaver somniferum HOM05D005771 ORTHO05D007173 1.1e-47 194.9 351 40.7
THA.LOC104812740 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 1.8e-47 194.1 365 38.6
Sp1g28240 Schrenkiella parvula HOM05D005771 ORTHO05D007173 3.1e-47 193.4 367 37.1
Carub.0001s3106 Capsella rubella HOM05D005771 ORTHO05D007173 1.5e-46 191.0 295 41.4
VMungo0251G2395 Vigna mungo HOM05D005771 ORTHO05D007173 2.0e-46 190.7 312 39.4
Peaxi162Scf00084g00314 Petunia axillaris HOM05D005771 ORTHO05D007173 2.2e-45 187.2 365 35.9
EL10Ac5g12212 Beta vulgaris HOM05D005771 ORTHO05D007173 1.0e-42 178.3 343 35.9
Zm00001eb261700 Zea mays HOM05D005771 ORTHO05D007173 2.3e-42 177.2 344 34.9
Psat4g077240 Pisum sativum HOM05D005771 ORTHO05D007173 1.1e-41 174.9 278 39.9
BcaC05g27301 Brassica carinata HOM05D005771 ORTHO05D007173 1.5e-41 174.5 389 35.7
Os08g0129500 Oryza sativa ssp. japonica HOM05D005771 ORTHO05D007173 5.6e-41 172.6 343 35.3
Sabra01G0116900 Salix brachista HOM05D005771 ORTHO05D007173 7.3e-41 172.2 385 36.9
vmacro14112 Vaccinium macrocarpon HOM05D005771 ORTHO05D007173 3.1e-39 166.8 277 40.4
BcaC05g27831 Brassica carinata HOM05D005771 ORTHO05D007173 1.9e-36 157.5 280 38.2
C05p38290 Brassica napus HOM05D005771 ORTHO05D007173 1.9e-36 157.5 280 38.2
BolC5t32561H Brassica oleracea HOM05D005771 ORTHO05D007173 1.9e-36 157.5 280 38.2
unitig_21.g20376 Utricularia gibba HOM05D005771 ORTHO05D007173 2.4e-36 157.1 388 33.8
A05p24640 Brassica napus HOM05D005771 ORTHO05D007173 6.0e-35 152.5 293 37.5
BraA05t21350Z Brassica rapa HOM05D005771 ORTHO05D007173 6.0e-35 152.5 293 37.5
AUR62007206 Chenopodium quinoa HOM05D005771 ORTHO05D007173 2.5e-33 147.1 319 35.4
AUR62018795 Chenopodium quinoa HOM05D005771 ORTHO05D007173 1.6e-32 144.4 319 35.1
Oeu039354.1 Olea europaea HOM05D005771 ORTHO05D007173 6.2e-32 142.5 272 34.9
Sabra01G0118400 Salix brachista HOM05D005771 ORTHO05D007173 9.9e-30 135.2 315 35.6
FAN13G3323 Fragaria x ananassa HOM05D005771 ORTHO05D007173 2.1e-27 127.5 246 36.2
Ah.07g199650 Amaranthus hybridus HOM05D005771 ORTHO05D007173 6.2e-24 115.9 378 29.4
SEGI_22059 Sequoiadendron giganteum HOM05D005771 ORTHO05D000001 1.4e-20 104.8 261 33.7
TPR.G12459 Trifolium pratense HOM05D005771 ORTHO05D007173 3.9e-18 96.7 160 40.0
AagrBONN_evm.TU.Sc2ySwM_117.836 Anthoceros agrestis HOM05D005771 ORTHO05D007173 1.5e-14 84.7 337 25.2
Pp3c2_10410 Physcomitrium patens HOM05D005771 ORTHO05D007173 5.8e-14 82.8 331 26.9
Psat4g077280 Pisum sativum HOM05D005771 ORTHO05D007173 7.6e-14 82.4 77 57.1
Zm00001eb173270 Zea mays HOM05D005771 ORTHO05D007173 7.6e-14 82.4 231 31.2
Mapoly0082s0082 Marchantia polymorpha HOM05D005771 ORTHO05D007173 4.2e-12 76.6 335 26.9
TAR636G0006 Trochodendron aralioides HOM05D005771 ORTHO05D007173 6.0e-11 72.8 47 74.5
SEGI_34267 Sequoiadendron giganteum HOM05D005771 ORTHO05D007173 6.7e-10 69.3 35 77.1
arahy.Tifrunner.gnm1.ann1.ARXY04 Arachis hypogaea HOM05D005771 ORTHO05D007173 1.1e-09 68.6 35 80.0
SMO347G0210 Selaginella moellendorffii HOM05D005771 ORTHO05D007173 5.8e-06 56.2 386 23.1


User provided reference genes

Program Settings