Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE01G0692 Ceratophyllum demersum HOM05D001952 ORTHO05D004913 4.3e-245 850.9 433 100.0
TAR375G0220 Trochodendron aralioides HOM05D001952 ORTHO05D004913 5.3e-102 375.6 493 44.0
Hma1.2p1_0132F.1_g060740 Hydrangea macrophylla HOM05D001952 ORTHO05D004913 1.3e-95 354.4 494 41.5
Lj6A55T16 Lonicera japonica HOM05D001952 ORTHO05D004913 9.1e-94 348.2 501 39.7
CSS0007104 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D004913 2.0e-93 347.1 498 39.8
CSS0039830 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D004913 2.0e-93 347.1 498 39.8
CANSAT56G1737 Cannabis sativa HOM05D001952 ORTHO05D004913 8.5e-92 341.7 494 40.1
ECA236G1094 Erigeron canadensis HOM05D001952 ORTHO05D004913 7.2e-91 338.6 484 38.4
MBI05_g28393_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 7.2e-91 338.6 501 41.3
Cc02_g37060 Coffea canephora HOM05D001952 ORTHO05D004913 9.4e-91 338.2 491 38.3
Oeu024552.2 Olea europaea HOM05D001952 ORTHO05D004913 2.1e-90 337.0 490 38.8
Rhsim05G0144200 Rhododendron simsii HOM05D001952 ORTHO05D004913 2.7e-90 336.7 497 40.0
DCAR_006897 Daucus carota HOM05D001952 ORTHO05D004913 3.6e-90 336.3 490 39.8
Sc02g0002270 Simmondsia chinensis HOM05D001952 ORTHO05D004913 6.1e-90 335.5 498 41.0
Lsat_1_v5_gn_7_6921 Lactuca sativa HOM05D001952 ORTHO05D004913 1.8e-89 334.0 485 38.1
HanXRQChr04g0122171 Helianthus annuus HOM05D001952 ORTHO05D004913 5.1e-89 332.4 495 36.4
QL08p050945 Quercus lobata HOM05D001952 ORTHO05D004913 4.4e-88 329.3 493 40.2
Cpa.g.sc753.2 Carica papaya HOM05D001952 ORTHO05D004913 1.3e-87 327.8 493 39.6
Phvul.005G009900 Phaseolus vulgaris HOM05D001952 ORTHO05D004913 1.7e-87 327.4 465 39.8
Atru.chr1.534 Acer truncatum HOM05D001952 ORTHO05D004913 2.2e-87 327.0 482 39.8
Haze_00291 Corylus avellana HOM05D001952 ORTHO05D004913 4.8e-87 325.9 477 40.9
Aqoxy5G00703 Aquilegia oxysepala HOM05D001952 ORTHO05D004913 8.2e-87 325.1 488 37.7
Gorai.002G109800 Gossypium raimondii HOM05D001952 ORTHO05D004913 1.1e-86 324.7 488 38.3
PGSC0003DMG402027917 Solanum tuberosum HOM05D001952 ORTHO05D004913 1.1e-86 324.7 478 38.5
Solyc02g080650.3 Solanum lycopersicum HOM05D001952 ORTHO05D004913 1.4e-86 324.3 496 36.9
Aa31LG11G5430 Aethionema arabicum HOM05D001952 ORTHO05D004913 4.1e-86 322.8 463 41.3
TWI34G0947 Tripterygium wilfordii HOM05D001952 ORTHO05D004913 5.3e-86 322.4 486 39.5
Aqoxy2G02797 Aquilegia oxysepala HOM05D001952 ORTHO05D004913 7.0e-86 322.0 484 37.0
Gohir.D01G084100 Gossypium hirsutum HOM05D001952 ORTHO05D004913 1.5e-85 320.9 488 37.9
MD15G1435200 Malus domestica HOM05D001952 ORTHO05D004913 2.0e-85 320.5 500 36.8
Hund16968 Selenicereus undatus HOM05D001952 ORTHO05D004913 2.0e-85 320.5 490 37.6
Ah.05g175860 Amaranthus hybridus HOM05D001952 ORTHO05D004913 2.6e-85 320.1 492 37.6
Haze_16907 Corylus avellana HOM05D001952 ORTHO05D004913 2.6e-85 320.1 477 40.3
Sopen02g025360 Solanum pennellii HOM05D001952 ORTHO05D004913 2.6e-85 320.1 496 36.7
PGSC0003DMG400016476 Solanum tuberosum HOM05D001952 ORTHO05D004913 2.6e-85 320.1 492 37.0
Ciclev10004825m.g Citrus clementina HOM05D001952 ORTHO05D004913 3.5e-85 319.7 492 38.6
Thecc.07G183300 Theobroma cacao HOM05D001952 ORTHO05D004913 4.5e-85 319.3 488 36.3
Aa31LG4G9800 Aethionema arabicum HOM05D001952 ORTHO05D004913 5.9e-85 318.9 462 39.6
Gohir.A01G099700 Gossypium hirsutum HOM05D001952 ORTHO05D004913 5.9e-85 318.9 488 37.5
Manes.05G041100 Manihot esculenta HOM05D001952 ORTHO05D004913 5.9e-85 318.9 495 39.2
Nitab4.5_0000603g0070 Nicotiana tabacum HOM05D001952 ORTHO05D004913 5.9e-85 318.9 491 36.7
THA.LOC104801468 Tarenaya hassleriana HOM05D001952 ORTHO05D004913 7.7e-85 318.5 473 39.1
CARHR248310 Cardamine hirsuta HOM05D001952 ORTHO05D004913 1.0e-84 318.2 467 39.8
EL10Ac1g00960 Beta vulgaris HOM05D001952 ORTHO05D004913 1.3e-84 317.8 490 37.1
AUR62004280 Chenopodium quinoa HOM05D001952 ORTHO05D004913 2.9e-84 316.6 491 37.9
Potri.014G074900 Populus trichocarpa HOM05D001952 ORTHO05D004913 2.9e-84 316.6 490 38.8
Psat3g112920 Pisum sativum HOM05D001952 ORTHO05D004913 5.0e-84 315.8 477 37.5
AUR62033377 Chenopodium quinoa HOM05D001952 ORTHO05D004913 6.5e-84 315.5 495 37.6
arahy.Tifrunner.gnm1.ann1.U9VUHP Arachis hypogaea HOM05D001952 ORTHO05D004913 8.5e-84 315.1 492 37.0
arahy.Tifrunner.gnm1.ann1.Z6RYGL Arachis hypogaea HOM05D001952 ORTHO05D004913 8.5e-84 315.1 492 37.0
Eucgr.H05060 Eucalyptus grandis HOM05D001952 ORTHO05D004913 8.5e-84 315.1 495 37.6
MELO3C003326.2 Cucumis melo HOM05D001952 ORTHO05D004913 1.1e-83 314.7 508 38.0
Nitab4.5_0003477g0020 Nicotiana tabacum HOM05D001952 ORTHO05D004913 1.1e-83 314.7 492 36.4
Sabra14G0053600 Salix brachista HOM05D001952 ORTHO05D004913 1.1e-83 314.7 491 39.1
MBI17_g11655_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 1.9e-83 313.9 500 40.0
PGR004G1086 Punica granatum HOM05D001952 ORTHO05D004913 1.9e-83 313.9 491 38.1
Medtr7g075940 Medicago truncatula HOM05D001952 ORTHO05D004913 2.5e-83 313.5 497 37.0
Psat4g209120 Pisum sativum HOM05D001952 ORTHO05D004913 2.5e-83 313.5 476 39.1
Phvul.005G010100 Phaseolus vulgaris HOM05D001952 ORTHO05D005568 9.4e-83 311.6 492 37.0
AL6G53250 Arabidopsis lyrata HOM05D001952 ORTHO05D004913 1.2e-82 311.2 472 39.8
CAN.G1014.4 Capsicum annuum HOM05D001952 ORTHO05D004913 1.2e-82 311.2 484 36.8
arahy.Tifrunner.gnm1.ann1.7790ZZ Arachis hypogaea HOM05D001952 ORTHO05D004913 2.1e-82 310.5 493 36.7
COL.COLO4_19760 Corchorus olitorius HOM05D001952 ORTHO05D004913 2.7e-82 310.1 488 37.3
VMungo1383G2849 Vigna mungo HOM05D001952 ORTHO05D004913 2.7e-82 310.1 496 37.1
Carub.0005s0957 Capsella rubella HOM05D001952 ORTHO05D004913 3.6e-82 309.7 476 38.9
Gohir.D01G083600 Gossypium hirsutum HOM05D001952 ORTHO05D004913 3.6e-82 309.7 488 37.5
ClCG09G012850 Citrullus lanatus HOM05D001952 ORTHO05D004913 4.7e-82 309.3 500 38.0
Glyma.18G215400 Glycine max HOM05D001952 ORTHO05D004913 8.0e-82 308.5 498 37.1
FAN10G0713 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.0e-81 308.1 496 36.5
FAN03G2676 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.4e-81 307.8 501 36.7
FAN10G1564 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.4e-81 307.8 494 36.2
Lalb_Chr19g0127181 Lupinus albus HOM05D001952 ORTHO05D004913 3.9e-81 306.2 493 36.9
Peaxi162Scf00231g00244 Petunia axillaris HOM05D001952 ORTHO05D004913 3.9e-81 306.2 477 36.9
FAN06G4730 Fragaria x ananassa HOM05D001952 ORTHO05D004913 5.2e-81 305.8 501 36.7
Sed0000408 Sechium edule HOM05D001952 ORTHO05D004913 5.2e-81 305.8 502 37.8
AT4G00231 Arabidopsis thaliana HOM05D001952 ORTHO05D004913 6.7e-81 305.4 469 39.7
Lj5g0018602 Lotus japonicus HOM05D001952 ORTHO05D004913 6.7e-81 305.4 491 37.3
BcaB01g02233 Brassica carinata HOM05D001952 ORTHO05D004913 8.8e-81 305.1 467 39.6
Thhalv10025092m.g Eutrema salsugineum HOM05D001952 ORTHO05D004913 1.5e-80 304.3 494 38.3
Duzib213G0290 Durio zibethinus HOM05D001952 ORTHO05D004913 2.6e-80 303.5 488 36.7
RcHm_v2.0_Chr1g0351801 Rosa chinensis HOM05D001952 ORTHO05D004913 4.4e-80 302.8 502 36.1
FvH4_7g08540 Fragaria vesca HOM05D001952 ORTHO05D004913 9.7e-80 301.6 501 36.3
SalBow7G2566 Salvia bowleyana HOM05D001952 ORTHO05D004913 2.2e-79 300.4 477 36.1
BolC9t52959H Brassica oleracea HOM05D001952 ORTHO05D004913 1.8e-78 297.4 482 38.4
FAN06G0845 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.8e-78 297.4 500 36.6
ATR0820G267 Amborella trichopoda HOM05D001952 ORTHO05D004913 2.4e-78 297.0 524 34.9
BcaC04g24187 Brassica carinata HOM05D001952 ORTHO05D004913 4.1e-78 296.2 479 38.8
FAN06G0866 Fragaria x ananassa HOM05D001952 ORTHO05D004913 4.1e-78 296.2 500 36.4
SGA_v2.0_scaffold7G04047 Striga asiatica HOM05D001952 ORTHO05D004913 4.1e-78 296.2 489 36.2
FvH4_7g12770 Fragaria vesca HOM05D001952 ORTHO05D004913 5.3e-78 295.8 500 36.4
Migut.D01755 Erythranthe guttata HOM05D001952 ORTHO05D004913 1.0e-76 291.6 500 35.0
C09p00240 Brassica napus HOM05D001952 ORTHO05D004913 1.3e-76 291.2 482 38.8
BraA09t35698Z Brassica rapa HOM05D001952 ORTHO05D004913 1.7e-76 290.8 482 38.4
Migut.L00973 Erythranthe guttata HOM05D001952 ORTHO05D004913 2.2e-76 290.4 501 34.9
A09p00620 Brassica napus HOM05D001952 ORTHO05D004913 5.0e-76 289.3 482 38.6
unitig_0.g170 Utricularia gibba HOM05D001952 ORTHO05D004913 1.1e-75 288.1 474 36.1
PSO782G1679 Papaver somniferum HOM05D001952 ORTHO05D004913 1.6e-74 284.3 502 35.3
Migut.L00878 Erythranthe guttata HOM05D001952 ORTHO05D004913 2.1e-74 283.9 474 34.8
PSO478G1189 Papaver somniferum HOM05D001952 ORTHO05D004913 4.7e-74 282.7 503 35.0
Peaxi162Scf00207g01356 Petunia axillaris HOM05D001952 ORTHO05D004913 8.0e-74 282.0 525 33.3
TAR624G0159 Trochodendron aralioides HOM05D001952 ORTHO05D004913 1.0e-73 281.6 509 36.3
Dinv32411 Davidia involucrata HOM05D001952 ORTHO05D004913 2.3e-73 280.4 378 41.0
RcHm_v2.0_Chr1g0313121 Rosa chinensis HOM05D001952 ORTHO05D004913 3.7e-71 273.1 494 34.0
Os03g0118900 Oryza sativa ssp. japonica HOM05D001952 ORTHO05D004913 8.3e-71 271.9 475 37.3
Zm00001eb001350 Zea mays HOM05D001952 ORTHO05D004913 1.3e-68 264.6 468 36.1
Sp6g00320 Schrenkiella parvula HOM05D001952 ORTHO05D004913 3.2e-67 260.0 470 36.2
CsaV3_3G049900 Cucumis sativus L. HOM05D001952 ORTHO05D004913 4.2e-67 259.6 381 39.6
Prupe.2G152200 Prunus persica HOM05D001952 ORTHO05D004913 3.6e-66 256.5 377 38.5
Gohir.A01G099100 Gossypium hirsutum HOM05D001952 ORTHO05D004913 8.0e-66 255.4 457 35.2
CiPaw.02G175900 Carya illinoinensis HOM05D001952 ORTHO05D004913 1.4e-65 254.6 408 38.2
Lj4g0006210 Lotus japonicus HOM05D001952 ORTHO05D004913 2.3e-65 253.8 474 34.4
vmacro08923 Vaccinium macrocarpon HOM05D001952 ORTHO05D004913 6.8e-65 252.3 324 44.4
Gorai.002G109400 Gossypium raimondii HOM05D001952 ORTHO05D004913 8.3e-63 245.4 349 39.3
vmacro19640 Vaccinium macrocarpon HOM05D001952 ORTHO05D004913 7.7e-61 238.8 495 32.9
FAN01G0405 Fragaria x ananassa HOM05D001952 ORTHO05D004913 1.7e-60 237.7 415 34.7
SEGI_08371 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 5.0e-60 236.1 425 34.4
Carub.0006s2681 Capsella rubella HOM05D001952 ORTHO05D004913 1.6e-58 231.1 421 35.2
SEGI_14537 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 3.5e-53 213.4 424 30.9
Ca_07850_v3 Cicer arietinum L. HOM05D001952 ORTHO05D004913 2.3e-52 210.7 199 53.8
TPR.G18232 Trifolium pratense HOM05D001952 ORTHO05D004913 3.3e-51 206.8 197 53.3
Aa31LG10G10140 Aethionema arabicum HOM05D001952 ORTHO05D004913 5.6e-51 206.1 386 34.5
TPR.G13243 Trifolium pratense HOM05D001952 ORTHO05D004913 9.5e-51 205.3 195 53.8
TPR.G6584 Trifolium pratense HOM05D001952 ORTHO05D004913 9.5e-51 205.3 195 53.8
PSO781G0092 Papaver somniferum HOM05D001952 ORTHO05D004913 2.8e-50 203.8 501 29.3
MD07G1124700 Malus domestica HOM05D001952 ORTHO05D004913 2.3e-49 200.7 199 53.3
SMO351G0039 Selaginella moellendorffii HOM05D001952 ORTHO05D004913 5.2e-49 199.5 466 32.0
Hund09554 Selenicereus undatus HOM05D001952 ORTHO05D004913 2.2e-47 194.1 414 31.6
GSVIVG01026499001 Vitis vinifera HOM05D001952 ORTHO05D008796 2.2e-47 194.1 309 36.6
PSO782G4203 Papaver somniferum HOM05D001952 ORTHO05D004913 6.4e-47 192.6 195 53.8
Eucgr.I00835 Eucalyptus grandis HOM05D001952 ORTHO05D004913 1.1e-46 191.8 337 36.5
Cfa001612 Carpinus fangiana HOM05D001952 ORTHO05D004913 2.4e-46 190.7 191 55.0
AagrBONN_evm.TU.Sc2ySwM_117.782 Anthoceros agrestis HOM05D001952 ORTHO05D004913 5.4e-46 189.5 469 29.6
Pp3c21_1420 Physcomitrium patens HOM05D001952 ORTHO05D004913 1.2e-45 188.3 533 28.0
TPR.G34261 Trifolium pratense HOM05D001952 ORTHO05D004913 6.0e-45 186.0 155 58.1
SEGI_36330 Sequoiadendron giganteum HOM05D001952 ORTHO05D004913 6.2e-42 176.0 239 39.7
Eucgr.I00845 Eucalyptus grandis HOM05D001952 ORTHO05D004913 4.0e-41 173.3 331 36.0
Potri.008G158901 Populus trichocarpa HOM05D001952 ORTHO05D004913 1.7e-36 157.9 180 47.8
Migut.D01751 Erythranthe guttata HOM05D001952 ORTHO05D004913 5.6e-35 152.9 224 37.5
CBR_g31682 Chara braunii HOM05D001952 ORTHO05D004913 3.6e-34 150.2 251 35.5
Lj1g0014823 Lotus japonicus HOM05D001952 ORTHO05D004913 1.4e-33 148.3 165 50.9
Lj6A55T17 Lonicera japonica HOM05D001952 ORTHO05D004913 1.8e-33 147.9 195 45.1
HPP92_001565 Vanilla planifolia HOM05D001952 ORTHO05D004913 2.3e-33 147.5 198 43.4
Mapoly0062s0112 Marchantia polymorpha HOM05D001952 ORTHO05D004913 8.9e-33 145.6 199 39.7
TPR.G37851 Trifolium pratense HOM05D001952 ORTHO05D004913 5.8e-32 142.9 266 36.1
MD02G1196600 Malus domestica HOM05D001952 ORTHO05D004913 5.4e-30 136.3 272 31.6
PSO781G0254 Papaver somniferum HOM05D001952 ORTHO05D004913 5.4e-30 136.3 389 27.0
Glyma.09G276502 Glycine max HOM05D001952 ORTHO05D004913 4.6e-29 133.3 214 33.6
MBI17_g11657_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D004913 1.7e-28 131.3 169 44.4
TPR.G34267 Trifolium pratense HOM05D001952 ORTHO05D004913 8.6e-28 129.0 194 36.6
PSO781G0068 Papaver somniferum HOM05D001952 ORTHO05D004913 7.3e-27 125.9 463 24.0
PSO541G2051 Papaver somniferum HOM05D001952 ORTHO05D004913 3.6e-26 123.6 198 33.3
PSO541G1892 Papaver somniferum HOM05D001952 ORTHO05D004913 2.4e-25 120.9 457 23.2
TPR.G23686 Trifolium pratense HOM05D001952 ORTHO05D012360 3.1e-25 120.6 377 30.5
Sopen04g024480 Solanum pennellii HOM05D001952 ORTHO05D004913 1.7e-23 114.8 94 57.4
arahy.Tifrunner.gnm1.ann1.LMZ4B6 Arachis hypogaea HOM05D001952 ORTHO05D004913 1.4e-22 111.7 125 44.8
Oeu061480.1 Olea europaea HOM05D001952 ORTHO05D004913 1.2e-21 108.6 403 26.8
Ca_07851_v3 Cicer arietinum L. HOM05D001952 ORTHO05D004913 1.3e-20 105.1 122 41.8
FAN03G2381 Fragaria x ananassa HOM05D001952 ORTHO05D004913 4.3e-19 100.1 98 48.0
PSO782G4156 Papaver somniferum HOM05D001952 ORTHO05D004913 1.3e-18 98.6 135 36.3
PSO326G0001 Papaver somniferum HOM05D001952 ORTHO05D004913 2.8e-18 97.4 134 35.8
Cre08.g374300 Chlamydomonas reinhardtii HOM05D001952 ORTHO05D004913 2.4e-17 94.4 108 40.7
MD07G1124800 Malus domestica HOM05D001952 ORTHO05D004913 2.2e-15 87.8 144 32.6
Duzib268G0813 Durio zibethinus HOM05D001952 ORTHO05D004913 1.4e-14 85.1 89 44.9
TPR.G6606 Trifolium pratense HOM05D001952 ORTHO05D004913 2.4e-14 84.3 139 35.3
Peaxi162Scf00153g01322 Petunia axillaris HOM05D001952 ORTHO05D004913 1.2e-13 82.0 247 27.9
Nitab4.5_0001040g0030 Nicotiana tabacum HOM05D001952 ORTHO05D004913 2.3e-12 77.8 129 38.0
MCO07G121 Micromonas commoda HOM05D001952 ORTHO05D004913 2.1e-10 71.2 103 29.1
Sabra14G0053500 Salix brachista HOM05D001952 ORTHO05D004913 2.6e-08 64.3 153 28.8


User provided reference genes

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