Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE01G0613 Ceratophyllum demersum HOM05D007174 ORTHO05D009061 2.6e-83 312.0 158 100.0
Nn1g01328 Nelumbo nucifera HOM05D007174 ORTHO05D009061 5.8e-22 108.2 168 38.7
CSS0030220 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 4.9e-21 105.1 161 38.5
CSS0030546 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 4.9e-21 105.1 161 38.5
MBI04_g40843_MAGBIO Magnolia biondii HOM05D007174 ORTHO05D009061 1.9e-20 103.2 169 36.1
CSS0029278 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 2.4e-20 102.8 161 38.5
arahy.Tifrunner.gnm1.ann1.CGP099 Arachis hypogaea HOM05D007174 ORTHO05D009061 5.4e-20 101.7 141 36.2
Haze_13772 Corylus avellana HOM05D007174 ORTHO05D009061 5.4e-20 101.7 154 39.0
Potri.012G134500 Populus trichocarpa HOM05D007174 ORTHO05D009061 9.2e-20 100.9 155 39.4
Eucgr.K00215 Eucalyptus grandis HOM05D007174 ORTHO05D009061 1.2e-19 100.5 158 41.1
Thhalv10004841m.g Eutrema salsugineum HOM05D007174 ORTHO05D009061 1.2e-19 100.5 136 40.4
Thecc.03G169500 Theobroma cacao HOM05D007174 ORTHO05D009061 1.6e-19 100.1 154 37.7
Manes.14G029900 Manihot esculenta HOM05D007174 ORTHO05D009061 2.0e-19 99.8 154 37.7
VMungo0464G0116 Vigna mungo HOM05D007174 ORTHO05D009061 2.0e-19 99.8 159 38.4
QL09p015458 Quercus lobata HOM05D007174 ORTHO05D009061 2.7e-19 99.4 112 45.5
arahy.Tifrunner.gnm1.ann1.AW02WS Arachis hypogaea HOM05D007174 ORTHO05D009061 4.6e-19 98.6 95 46.3
Glyma.09G147500 Glycine max HOM05D007174 ORTHO05D009061 4.6e-19 98.6 145 40.7
CAN.G548.22 Capsicum annuum HOM05D007174 ORTHO05D009061 6.0e-19 98.2 159 40.9
SalBow4G1508 Salvia bowleyana HOM05D007174 ORTHO05D009061 6.0e-19 98.2 163 38.7
BcaB07g29797 Brassica carinata HOM05D007174 ORTHO05D009061 1.0e-18 97.4 152 42.1
Glyma.16G199500 Glycine max HOM05D007174 ORTHO05D009061 1.0e-18 97.4 160 37.5
Phvul.004G122400 Phaseolus vulgaris HOM05D007174 ORTHO05D009061 1.0e-18 97.4 155 37.4
Prupe.2G289100 Prunus persica HOM05D007174 ORTHO05D009061 1.0e-18 97.4 158 38.6
vmacro09863 Vaccinium macrocarpon HOM05D007174 ORTHO05D009061 1.0e-18 97.4 159 39.0
arahy.Tifrunner.gnm1.ann1.09T8EW Arachis hypogaea HOM05D007174 ORTHO05D009061 1.3e-18 97.1 93 45.2
CSS0008795 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 1.3e-18 97.1 161 37.3
Dinv35170 Davidia involucrata HOM05D007174 ORTHO05D009061 1.3e-18 97.1 164 37.8
SGA_v2.0_scaffold2G01087 Striga asiatica HOM05D007174 ORTHO05D009061 1.3e-18 97.1 111 46.8
Aqoxy7G00468 Aquilegia oxysepala HOM05D007174 ORTHO05D009061 1.7e-18 96.7 164 38.4
Lj2g0011010 Lotus japonicus HOM05D007174 ORTHO05D009061 1.7e-18 96.7 155 34.8
A02p42000 Brassica napus HOM05D007174 ORTHO05D009061 2.3e-18 96.3 116 46.6
BraA02t09135Z Brassica rapa HOM05D007174 ORTHO05D009061 2.3e-18 96.3 116 46.6
Dinv28496 Davidia involucrata HOM05D000059 ORTHO05D005093 2.3e-18 96.3 95 51.6
Migut.F00385 Erythranthe guttata HOM05D007174 ORTHO05D009061 2.3e-18 96.3 101 49.5
Lj1A990G55 Lonicera japonica HOM05D007174 ORTHO05D009061 2.3e-18 96.3 95 51.6
Sopen03g005220 Solanum pennellii HOM05D007174 ORTHO05D009061 2.3e-18 96.3 159 38.4
BcaC03g18123 Brassica carinata HOM05D007174 ORTHO05D009061 3.0e-18 95.9 116 46.6
BolC2t12246H Brassica oleracea HOM05D007174 ORTHO05D009061 3.0e-18 95.9 116 46.6
Nitab4.5_0008764g0010 Nicotiana tabacum HOM05D007174 ORTHO05D009061 3.0e-18 95.9 159 37.7
Os02g0677600 Oryza sativa ssp. japonica HOM05D007174 ORTHO05D009061 3.0e-18 95.9 99 50.5
PGSC0003DMG400014262 Solanum tuberosum HOM05D007174 ORTHO05D009061 3.0e-18 95.9 158 39.2
MSTRG.27141 Avicennia marina HOM05D007174 ORTHO05D009061 3.9e-18 95.5 166 36.7
CiPaw.04G068400 Carya illinoinensis HOM05D007174 ORTHO05D009061 3.9e-18 95.5 157 35.7
Lj6g0017578 Lotus japonicus HOM05D007174 ORTHO05D009061 3.9e-18 95.5 155 34.8
Ciclev10005753m.g Citrus clementina HOM05D007174 ORTHO05D009061 5.0e-18 95.1 159 37.7
Duzib205G1938 Durio zibethinus HOM05D007174 ORTHO05D009061 5.0e-18 95.1 155 36.8
DCAR_018153 Daucus carota HOM05D007174 ORTHO05D009061 8.6e-18 94.4 169 36.1
Gohir.A12G261100 Gossypium hirsutum HOM05D007174 ORTHO05D009061 8.6e-18 94.4 154 36.4
Gorai.008G280800 Gossypium raimondii HOM05D007174 ORTHO05D009061 8.6e-18 94.4 154 36.4
Peaxi162Scf00648g00220 Petunia axillaris HOM05D007174 ORTHO05D009061 1.1e-17 94.0 159 37.7
Rhsim09G0195900 Rhododendron simsii HOM05D007174 ORTHO05D009061 1.1e-17 94.0 154 37.0
CARHR275910 Cardamine hirsuta HOM05D007174 ORTHO05D009061 1.5e-17 93.6 126 38.9
Lalb_Chr19g0131081 Lupinus albus HOM05D007174 ORTHO05D009061 1.5e-17 93.6 104 43.3
Sp2g25310 Schrenkiella parvula HOM05D007174 ORTHO05D009061 1.5e-17 93.6 106 48.1
Nitab4.5_0000832g0170 Nicotiana tabacum HOM05D007174 ORTHO05D009061 1.9e-17 93.2 159 35.8
AL8G38920 Arabidopsis lyrata HOM05D007174 ORTHO05D009061 2.5e-17 92.8 130 39.2
CANSAT21G1580 Cannabis sativa HOM05D007174 ORTHO05D009061 2.5e-17 92.8 161 36.6
Solyc03g026330.4 Solanum lycopersicum HOM05D007174 ORTHO05D009061 2.5e-17 92.8 154 38.3
TAR374G0585 Trochodendron aralioides HOM05D007174 ORTHO05D009061 2.5e-17 92.8 94 52.1
THA.LOC104826810 Tarenaya hassleriana HOM05D007174 ORTHO05D009061 3.3e-17 92.4 128 43.0
TPR.G9185 Trifolium pratense HOM05D007174 ORTHO05D009061 3.3e-17 92.4 95 49.5
ATR0757G135 Amborella trichopoda HOM05D007174 ORTHO05D009061 4.3e-17 92.0 92 50.0
AT5G62140 Arabidopsis thaliana HOM05D007174 ORTHO05D009061 5.6e-17 91.7 143 37.8
Psat1g105240 Pisum sativum HOM05D007174 ORTHO05D009061 5.6e-17 91.7 109 43.1
EL10Ac3g05680 Beta vulgaris HOM05D007174 ORTHO05D009061 7.3e-17 91.3 100 45.0
Carub.0008s2281 Capsella rubella HOM05D007174 ORTHO05D009061 7.3e-17 91.3 130 38.5
FvH4_7g28911 Fragaria vesca HOM05D007174 ORTHO05D009061 7.3e-17 91.3 121 39.7
FAN06G1461 Fragaria x ananassa HOM05D000059 ORTHO05D005093 7.3e-17 91.3 121 39.7
MD01G1195800 Malus domestica HOM05D007174 ORTHO05D009061 7.3e-17 91.3 114 43.0
Sabra12G0101100 Salix brachista HOM05D007174 ORTHO05D009061 1.6e-16 90.1 139 41.0
Medtr6g465290 Medicago truncatula HOM05D007174 ORTHO05D009061 4.7e-16 88.6 111 42.3
AUR62016040 Chenopodium quinoa HOM05D007174 ORTHO05D009061 6.2e-16 88.2 107 41.1
Lsat_1_v5_gn_9_53840 Lactuca sativa HOM05D007174 ORTHO05D009061 6.2e-16 88.2 95 48.4
RcHm_v2.0_Chr1g0376581 Rosa chinensis HOM05D007174 ORTHO05D009061 6.2e-16 88.2 155 34.8
Sc25g0000350 Simmondsia chinensis HOM05D007174 ORTHO05D009061 8.1e-16 87.8 143 38.5
CsaV3_3G016740 Cucumis sativus L. HOM05D007174 ORTHO05D009061 1.1e-15 87.4 158 34.2
HanXRQChr15g0473391 Helianthus annuus HOM05D000003 ORTHO05D000004 1.4e-15 87.0 111 43.2
PGR142G4376 Punica granatum HOM05D007174 ORTHO05D009061 1.4e-15 87.0 162 36.4
Zm00001eb187200 Zea mays HOM05D007174 ORTHO05D009061 1.4e-15 87.0 96 46.9
MELO3C006867.2 Cucumis melo HOM05D007174 ORTHO05D009061 1.8e-15 86.7 154 34.4
GSVIVG01010637001 Vitis vinifera HOM05D007174 ORTHO05D009061 1.8e-15 86.7 156 34.6
TWI23G0481 Tripterygium wilfordii HOM05D007174 ORTHO05D009061 2.3e-15 86.3 156 37.8
Cpa.g.sc3.335 Carica papaya HOM05D007174 ORTHO05D009061 8.9e-15 84.3 95 46.3
FAN03G3394 Fragaria x ananassa HOM05D000059 ORTHO05D005093 8.9e-15 84.3 121 37.2
ClCG05G007760 Citrullus lanatus HOM05D002642 ORTHO05D002834 1.2e-14 84.0 157 33.8
Actinidia03101 Actinidia chinensis HOM05D007174 ORTHO05D009061 2.6e-14 82.8 80 53.8
COL.COLO4_14250 Corchorus olitorius HOM05D000059 ORTHO05D005093 2.6e-14 82.8 109 43.1
FAN03G1635 Fragaria x ananassa HOM05D000059 ORTHO05D005093 3.4e-14 82.4 121 36.4
FAN10G2932 Fragaria x ananassa HOM05D000059 ORTHO05D005093 3.4e-14 82.4 121 37.2
FAN01G2691 Fragaria x ananassa HOM05D000059 ORTHO05D005093 5.8e-14 81.6 121 38.0
Sed0014335 Sechium edule HOM05D002642 ORTHO05D002834 2.9e-13 79.3 152 36.2
Atru.chr1.537 Acer truncatum HOM05D007174 ORTHO05D009061 4.9e-13 78.6 157 36.3
SMO137G0111 Selaginella moellendorffii HOM05D007174 ORTHO05D009061 4.9e-13 78.6 110 41.8
Cc02_g03460 Coffea canephora HOM05D007174 ORTHO05D009061 1.4e-12 77.0 111 37.8
Pp3c13_6960 Physcomitrium patens HOM05D007174 ORTHO05D009061 3.5e-11 72.4 102 37.3
Pp3c4_22170 Physcomitrium patens HOM05D007174 ORTHO05D009061 4.6e-11 72.0 119 34.5
AagrBONN_evm.TU.Sc2ySwM_228.5753 Anthoceros agrestis HOM05D007174 ORTHO05D009061 7.8e-11 71.2 92 42.4
SEGI_06842 Sequoiadendron giganteum HOM05D007174 ORTHO05D009061 7.8e-11 71.2 92 39.1
Pp3c26_1960 Physcomitrium patens HOM05D007174 ORTHO05D009061 1.0e-10 70.9 99 36.4
Mapoly0145s0018 Marchantia polymorpha HOM05D007174 ORTHO05D009061 1.3e-10 70.5 109 37.6
CBR_g53539 Chara braunii HOM05D007174 ORTHO05D009061 4.7e-08 62.0 92 34.8
Cre01.g019600 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 1.1e-07 60.8 100 37.0
ECA232G4749 Erigeron canadensis HOM05D007174 ORTHO05D009061 1.1e-07 60.8 48 64.6
unitig_747.g21761 Utricularia gibba HOM05D007174 ORTHO05D009061 1.1e-07 60.8 72 45.8
EL10Ac3g05682 Beta vulgaris HOM05D007174 ORTHO05D009061 9.9e-06 54.3 125 31.2


User provided reference genes

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