Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g79910 Chara braunii HOM05D049801 ORTHO05D043924 1.6e-211 739.2 376 100.0
Mapoly0009s0244 Marchantia polymorpha HOM05D049801 ORTHO05D043924 1.5e-73 280.8 196 64.3
CANSAT80G1342 Cannabis sativa HOM05D006654 ORTHO05D008201 2.4e-10 70.9 129 36.4
AL8G40500 Arabidopsis lyrata HOM05D006654 ORTHO05D008201 3.2e-10 70.5 101 39.6
Aa31LG1G18600 Aethionema arabicum HOM05D006654 ORTHO05D008201 1.2e-09 68.6 101 37.6
Carub.0008s2414 Capsella rubella HOM05D006654 ORTHO05D008201 1.2e-09 68.6 101 38.6
Thhalv10004858m.g Eutrema salsugineum HOM05D006654 ORTHO05D008201 1.2e-09 68.6 101 37.6
FAN03G1885 Fragaria x ananassa HOM05D006654 ORTHO05D008201 1.2e-09 68.6 107 39.3
CARHR277290 Cardamine hirsuta HOM05D006654 ORTHO05D008201 2.7e-09 67.4 101 37.6
THA.LOC104818189 Tarenaya hassleriana HOM05D006654 ORTHO05D008201 2.7e-09 67.4 129 33.3
FAN01G0962 Fragaria x ananassa HOM05D006654 ORTHO05D008201 3.5e-09 67.0 107 38.3
FAN06G4528 Fragaria x ananassa HOM05D006654 ORTHO05D008201 3.5e-09 67.0 107 38.3
Sp2g26520 Schrenkiella parvula HOM05D006654 ORTHO05D008201 3.5e-09 67.0 101 36.6
TPR.G39480 Trifolium pratense HOM05D006654 ORTHO05D008201 3.5e-09 67.0 107 37.4
BcaC01g02588 Brassica carinata HOM05D006654 ORTHO05D008201 4.6e-09 66.6 101 37.6
FAN10G2487 Fragaria x ananassa HOM05D006654 ORTHO05D008201 4.6e-09 66.6 107 38.3
AT5G63440 Arabidopsis thaliana HOM05D006654 ORTHO05D008201 6.0e-09 66.2 101 37.6
Oeu023486.1 Olea europaea HOM05D006654 ORTHO05D008201 6.0e-09 66.2 107 37.4
FAN01G2458 Fragaria x ananassa HOM05D006654 ORTHO05D008201 7.8e-09 65.9 107 37.4
FvH4_7g00630 Fragaria vesca HOM05D006654 ORTHO05D008201 1.0e-08 65.5 107 37.4
Pp3c22_11190 Physcomitrium patens HOM05D006654 ORTHO05D008201 1.0e-08 65.5 101 38.6
Pp3c22_11201 Physcomitrium patens HOM05D006654 ORTHO05D008201 1.0e-08 65.5 101 38.6
MD02G1316100 Malus domestica HOM05D006654 ORTHO05D008201 1.7e-08 64.7 107 37.4
Oeu044257.1 Olea europaea HOM05D006654 ORTHO05D008201 1.7e-08 64.7 129 34.1
TWI23G1026 Tripterygium wilfordii HOM05D006654 ORTHO05D008201 1.7e-08 64.7 107 36.4
RcHm_v2.0_Chr1g0314831 Rosa chinensis HOM05D006654 ORTHO05D008201 2.3e-08 64.3 107 36.4
Prupe.4G287600 Prunus persica HOM05D006654 ORTHO05D008201 3.0e-08 63.9 107 36.4
Actinidia08864 Actinidia chinensis HOM05D006654 ORTHO05D008201 3.9e-08 63.5 129 34.1
MD07G1005800 Malus domestica HOM05D006654 ORTHO05D008201 3.9e-08 63.5 107 36.4
Manes.06G118600 Manihot esculenta HOM05D006654 ORTHO05D008201 5.1e-08 63.2 129 34.1
Atru.BG.190.p Acer truncatum HOM05D006654 ORTHO05D008201 6.6e-08 62.8 107 37.4
Glyma.20G249100 Glycine max HOM05D006654 ORTHO05D008201 6.6e-08 62.8 102 37.3
Thecc.03G127500 Theobroma cacao HOM05D006654 ORTHO05D008201 1.1e-07 62.0 129 34.1
GSVIVG01008527001 Vitis vinifera HOM05D006654 ORTHO05D008201 1.1e-07 62.0 129 34.1
Manes.14G052100 Manihot esculenta HOM05D006654 ORTHO05D008201 1.5e-07 61.6 129 33.3
vmacro16672 Vaccinium macrocarpon HOM05D006654 ORTHO05D008201 1.5e-07 61.6 129 33.3
CiPaw.12G042200 Carya illinoinensis HOM05D006654 ORTHO05D008201 1.9e-07 61.2 129 32.6
Haze_07229 Corylus avellana HOM05D006654 ORTHO05D008201 1.9e-07 61.2 129 32.6
SGA_v2.0_scaffold161G37776 Striga asiatica HOM05D006654 ORTHO05D008201 1.9e-07 61.2 129 32.6
EL10As4g23406 Beta vulgaris HOM05D006654 ORTHO05D008201 2.5e-07 60.8 129 33.3
Cpa.g.sc13.133 Carica papaya HOM05D006654 ORTHO05D008201 2.5e-07 60.8 129 33.3
Eucgr.F01379 Eucalyptus grandis HOM05D006654 ORTHO05D008201 2.5e-07 60.8 107 36.4
Rhsim12G0173900 Rhododendron simsii HOM05D006654 ORTHO05D008201 2.5e-07 60.8 129 33.3
Sc10g0010430 Simmondsia chinensis HOM05D006654 ORTHO05D008201 2.5e-07 60.8 129 34.1
CSS0035351 Camellia sinensis var. sinensis HOM05D006654 ORTHO05D008201 3.3e-07 60.5 129 33.3
Gohir.A03G052100 Gossypium hirsutum HOM05D006654 ORTHO05D008201 3.3e-07 60.5 129 33.3
Gorai.003G121200 Gossypium raimondii HOM05D006654 ORTHO05D008201 3.3e-07 60.5 129 33.3
Lj5g0001059 Lotus japonicus HOM05D006654 ORTHO05D008201 4.3e-07 60.1 102 37.3
ClCG03G003720 Citrullus lanatus HOM05D006654 ORTHO05D008201 5.6e-07 59.7 129 33.3
CsaV3_1G009610 Cucumis sativus L. HOM05D006654 ORTHO05D008201 5.6e-07 59.7 129 33.3
Dinv11162 Davidia involucrata HOM05D006654 ORTHO05D008201 5.6e-07 59.7 129 32.6
Medtr1g117000 Medicago truncatula HOM05D001235 ORTHO05D005684 5.6e-07 59.7 102 35.3
C03p63160 Brassica napus HOM05D001045 ORTHO05D004836 9.5e-07 58.9 77 41.6
BolC3t18571H Brassica oleracea HOM05D001045 ORTHO05D004836 9.5e-07 58.9 77 41.6
Ca_11428_v3 Cicer arietinum L. HOM05D006654 ORTHO05D008201 9.5e-07 58.9 124 33.1
A06p30050 Brassica napus HOM05D001045 ORTHO05D004836 1.2e-06 58.5 77 41.6
BraA06t25957Z Brassica rapa HOM05D001045 ORTHO05D004836 1.2e-06 58.5 77 41.6
Cc04_g10050 Coffea canephora HOM05D006654 ORTHO05D008201 1.2e-06 58.5 129 31.8
Psat6g243960 Pisum sativum HOM05D006654 ORTHO05D008201 1.2e-06 58.5 102 36.3
Potri.012G096500 Populus trichocarpa HOM05D006654 ORTHO05D008201 1.2e-06 58.5 107 34.6
PGR083G1205 Punica granatum HOM05D006654 ORTHO05D008201 1.2e-06 58.5 129 34.1
arahy.Tifrunner.gnm1.ann1.653AWM Arachis hypogaea HOM05D006654 ORTHO05D008201 1.6e-06 58.2 124 31.5
arahy.Tifrunner.gnm1.ann1.S79YT6 Arachis hypogaea HOM05D006654 ORTHO05D008201 1.6e-06 58.2 124 31.5
QL10p003811 Quercus lobata HOM05D006654 ORTHO05D008201 1.6e-06 58.2 129 32.6
COL.COLO4_28092 Corchorus olitorius HOM05D006654 ORTHO05D008201 2.1e-06 57.8 82 42.7
HanXRQChr16g0497681 Helianthus annuus HOM05D006654 ORTHO05D008201 2.1e-06 57.8 130 33.1
ECA232G0809 Erigeron canadensis HOM05D006654 ORTHO05D008201 4.7e-06 56.6 129 31.8
Hma1.2p1_0014F.1_g009560 Hydrangea macrophylla HOM05D006654 ORTHO05D008201 4.7e-06 56.6 129 32.6
Hma1.2p1_0014F.1_g009570 Hydrangea macrophylla HOM05D006654 ORTHO05D008201 4.7e-06 56.6 129 32.6


User provided reference genes

Program Settings