Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g6736 Chara braunii HOM05D007571 ORTHO05D009439 3.5e-189 664.8 343 100.0
SEGI_38446 Sequoiadendron giganteum HOM05D007571 ORTHO05D009439 4.4e-19 99.8 87 55.2
AagrBONN_evm.TU.Sc2ySwM_228.3762 Anthoceros agrestis HOM05D007571 ORTHO05D009439 3.0e-15 87.0 104 47.1
DCAR_028375 Daucus carota HOM05D007571 ORTHO05D009439 1.5e-14 84.7 89 51.7
CAN.G1433.5 Capsicum annuum HOM05D007571 ORTHO05D009439 4.3e-14 83.2 68 58.8
Sed0007395 Sechium edule HOM05D007571 ORTHO05D009439 7.3e-14 82.4 93 45.2
Nitab4.5_0000687g0180 Nicotiana tabacum HOM05D007571 ORTHO05D009439 9.6e-14 82.0 65 61.5
Nitab4.5_0017347g0020 Nicotiana tabacum HOM05D007571 ORTHO05D009439 9.6e-14 82.0 65 63.1
Solyc05g150152.1 Solanum lycopersicum HOM05D007571 ORTHO05D009439 1.3e-13 81.6 67 58.2
Sopen05g033610 Solanum pennellii HOM05D007571 ORTHO05D009439 1.3e-13 81.6 67 58.2
PSO675G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 1.6e-13 81.3 81 50.6
CDE04G1832 Ceratophyllum demersum HOM05D007571 ORTHO05D009439 2.1e-13 80.9 78 56.4
Nn6g34507 Nelumbo nucifera HOM05D007571 ORTHO05D009439 2.1e-13 80.9 81 50.6
Actinidia04391 Actinidia chinensis HOM05D007571 ORTHO05D009439 3.6e-13 80.1 64 56.2
Haze_10272 Corylus avellana HOM05D007571 ORTHO05D009439 3.6e-13 80.1 65 58.5
Migut.F01585 Erythranthe guttata HOM05D007571 ORTHO05D009439 3.6e-13 80.1 66 51.5
HanXRQChr02g0053531 Helianthus annuus HOM05D007571 ORTHO05D009439 3.6e-13 80.1 97 46.4
Peaxi162Scf00519g00423 Petunia axillaris HOM05D007571 ORTHO05D009439 3.6e-13 80.1 66 56.1
Rhsim05G0092500 Rhododendron simsii HOM05D007571 ORTHO05D009439 3.6e-13 80.1 80 52.5
Actinidia27996 Actinidia chinensis HOM05D007571 ORTHO05D009439 4.8e-13 79.7 64 56.2
MELO3C018528.2 Cucumis melo HOM05D007571 ORTHO05D009439 4.8e-13 79.7 109 43.1
Pp3c17_8360 Physcomitrium patens HOM05D007571 ORTHO05D009439 4.8e-13 79.7 68 52.9
vmacro19538 Vaccinium macrocarpon HOM05D007571 ORTHO05D009439 6.2e-13 79.3 73 52.1
MSTRG.417 Avicennia marina HOM05D007571 ORTHO05D009439 8.1e-13 79.0 87 47.1
CsaV3_7G007730 Cucumis sativus L. HOM05D007571 ORTHO05D009439 1.1e-12 78.6 80 47.5
ECA238G3778 Erigeron canadensis HOM05D007571 ORTHO05D009439 1.1e-12 78.6 112 42.0
Lsat_1_v5_gn_2_105800 Lactuca sativa HOM05D007571 ORTHO05D009439 1.1e-12 78.6 108 41.7
Prupe.8G147200 Prunus persica HOM05D007571 ORTHO05D009439 1.4e-12 78.2 65 58.5
MBI16_g39621_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 1.8e-12 77.8 82 47.6
MBI16_g43666_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 1.8e-12 77.8 82 47.6
Oeu024805.1 Olea europaea HOM05D007571 ORTHO05D009439 1.8e-12 77.8 64 56.2
PSO541G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 1.8e-12 77.8 81 51.9
Sc05g0005590 Simmondsia chinensis HOM05D007571 ORTHO05D009439 2.4e-12 77.4 80 48.8
TWI59G0511 Tripterygium wilfordii HOM05D007571 ORTHO05D009439 2.4e-12 77.4 84 47.6
Ciclev10029547m.g Citrus clementina HOM05D007571 ORTHO05D009439 3.1e-12 77.0 70 52.9
GSVIVG01037807001 Vitis vinifera HOM05D007571 ORTHO05D009439 3.1e-12 77.0 101 42.6
MD10G1108300 Malus domestica HOM05D007571 ORTHO05D009439 5.3e-12 76.3 83 48.2
SGA_v2.0_scaffold62G21311 Striga asiatica HOM05D007002 ORTHO05D008602 5.3e-12 76.3 56 62.5
CSS0048413 Camellia sinensis var. sinensis HOM05D007571 ORTHO05D009439 6.9e-12 75.9 79 46.8
Cc02_g09420 Coffea canephora HOM05D007571 ORTHO05D009439 6.9e-12 75.9 136 40.4
PGR042G0328 Punica granatum HOM05D007571 ORTHO05D009439 6.9e-12 75.9 86 50.0
CARHR040010 Cardamine hirsuta HOM05D007571 ORTHO05D009439 9.0e-12 75.5 72 52.8
Potri.001G292000 Populus trichocarpa HOM05D007571 ORTHO05D009439 9.0e-12 75.5 65 55.4
TAR628G1270 Trochodendron aralioides HOM05D007571 ORTHO05D009439 9.0e-12 75.5 141 38.3
PGSC0003DMG400023397 Solanum tuberosum HOM05D007571 ORTHO05D009439 1.2e-11 75.1 58 62.1
THA.LOC104825387 Tarenaya hassleriana HOM05D007571 ORTHO05D009439 1.2e-11 75.1 68 54.4
COL.COLO4_32496 Corchorus olitorius HOM05D007571 ORTHO05D009439 1.5e-11 74.7 100 45.0
QL11p029955 Quercus lobata HOM05D007571 ORTHO05D009439 1.5e-11 74.7 65 53.8
Thecc.02G118900 Theobroma cacao HOM05D007571 ORTHO05D009439 1.5e-11 74.7 74 50.0
Hund06510 Selenicereus undatus HOM05D007571 ORTHO05D009439 2.0e-11 74.3 84 45.2
Ah.01g007010 Amaranthus hybridus HOM05D007571 ORTHO05D009439 2.6e-11 73.9 83 43.4
AUR62030860 Chenopodium quinoa HOM05D007571 ORTHO05D009439 2.6e-11 73.9 62 53.2
Dinv15820 Davidia involucrata HOM05D007571 ORTHO05D009439 3.4e-11 73.6 88 48.9
Os03g0731100 Oryza sativa ssp. japonica HOM05D007571 ORTHO05D009439 4.5e-11 73.2 85 47.1
ClCG02G007100 Citrullus lanatus HOM05D007571 ORTHO05D009439 5.8e-11 72.8 57 54.4
Duzib052G0547 Durio zibethinus HOM05D007571 ORTHO05D009439 5.8e-11 72.8 79 44.3
Eucgr.G01203 Eucalyptus grandis HOM05D007571 ORTHO05D009439 5.8e-11 72.8 65 50.8
Gohir.D12G019350 Gossypium hirsutum HOM05D007571 ORTHO05D009439 5.8e-11 72.8 75 46.7
Aqoxy6G02559 Aquilegia oxysepala HOM05D007571 ORTHO05D009439 1.3e-10 71.6 103 42.7
SalBow6G2573 Salvia bowleyana HOM05D007571 ORTHO05D009439 1.3e-10 71.6 66 51.5
Atru.chr5.2324 Acer truncatum HOM05D007571 ORTHO05D009439 1.7e-10 71.2 114 38.6
Thhalv10011862m.g Eutrema salsugineum HOM05D007571 ORTHO05D009439 1.7e-10 71.2 65 52.3
Gohir.A12G018900 Gossypium hirsutum HOM05D007571 ORTHO05D009439 1.7e-10 71.2 95 43.2
CANSAT25G0272 Cannabis sativa HOM05D007571 ORTHO05D009439 2.2e-10 70.9 65 49.2
CANSAT25G2750 Cannabis sativa HOM05D007571 ORTHO05D009439 2.2e-10 70.9 65 49.2
RcHm_v2.0_Chr6g0252541 Rosa chinensis HOM05D007571 ORTHO05D009439 2.2e-10 70.9 120 38.3
AL1G57530 Arabidopsis lyrata HOM05D007571 ORTHO05D009439 2.9e-10 70.5 68 50.0
AT1G49975 Arabidopsis thaliana HOM05D007571 ORTHO05D009439 2.9e-10 70.5 68 50.0
Glyma.10G256000 Glycine max HOM05D007571 ORTHO05D009439 2.9e-10 70.5 79 46.8
Carub.0001s3916 Capsella rubella HOM05D007571 ORTHO05D009439 3.8e-10 70.1 65 52.3
Medtr1g106075 Medicago truncatula HOM05D007571 ORTHO05D009439 3.8e-10 70.1 85 42.4
EL10Ac9g22184 Beta vulgaris HOM05D007571 ORTHO05D009439 4.9e-10 69.7 125 39.2
BcaC08g43171 Brassica carinata HOM05D007571 ORTHO05D009439 4.9e-10 69.7 65 52.3
A06p03470 Brassica napus HOM05D007571 ORTHO05D009439 4.9e-10 69.7 65 52.3
C06p04720 Brassica napus HOM05D007571 ORTHO05D009439 4.9e-10 69.7 65 52.3
BraA06t23555Z Brassica rapa HOM05D007571 ORTHO05D009439 4.9e-10 69.7 65 52.3
FvH4_2g03581 Fragaria vesca HOM05D007571 ORTHO05D009439 4.9e-10 69.7 106 40.6
FAN20G2923 Fragaria x ananassa HOM05D007571 ORTHO05D009439 4.9e-10 69.7 106 40.6
TPR.G21146 Trifolium pratense HOM05D007571 ORTHO05D009439 6.4e-10 69.3 101 40.6
ATR0739G046 Amborella trichopoda HOM05D007571 ORTHO05D009439 1.1e-09 68.6 63 55.6
BcaB07g33447 Brassica carinata HOM05D007571 ORTHO05D009439 1.1e-09 68.6 65 50.8
arahy.Tifrunner.gnm1.ann1.A1M8SQ Arachis hypogaea HOM05D007571 ORTHO05D009439 1.9e-09 67.8 66 48.5
arahy.Tifrunner.gnm1.ann1.I40GDJ Arachis hypogaea HOM05D007571 ORTHO05D009439 1.9e-09 67.8 66 48.5
Phvul.007G046800 Phaseolus vulgaris HOM05D007571 ORTHO05D009439 1.9e-09 67.8 65 49.2
CiPaw.05G019300 Carya illinoinensis HOM05D000470 ORTHO05D000348 3.2e-09 67.0 60 50.0
Lj5g0013426 Lotus japonicus HOM05D007571 ORTHO05D009439 3.2e-09 67.0 94 42.6
Zm00001eb056210 Zea mays HOM05D007571 ORTHO05D009439 3.2e-09 67.0 64 53.1
Sp1g36830 Schrenkiella parvula HOM05D007571 ORTHO05D009439 7.1e-09 65.9 65 49.2
Medtr3g008630 Medicago truncatula HOM05D007571 ORTHO05D009439 9.3e-09 65.5 85 41.2
Lalb_Chr21g0308001 Lupinus albus HOM05D007571 ORTHO05D009439 3.5e-08 63.5 64 46.9
Cre02.g086100 Chlamydomonas reinhardtii HOM05D007571 ORTHO05D009439 1.3e-07 61.6 102 42.2
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 3.0e-07 60.5 71 42.3
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 6.7e-07 59.3 61 44.3
SalBow6G2452 Salvia bowleyana HOM05D007571 ORTHO05D009439 5.6e-06 56.2 46 56.5
SMO117G0287 Selaginella moellendorffii HOM05D028851 ORTHO05D009439 5.6e-06 56.2 43 62.8
PRCOL_00000042 Prasinoderma coloniale HOM05D028851 ORTHO05D009439 7.4e-06 55.8 45 64.4
Sabra16G0182000 Salix brachista HOM05D007571 ORTHO05D009439 9.6e-06 55.5 109 33.0


User provided reference genes

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