Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g61489 Chara braunii HOM05D005937 ORTHO05D008151 0.0e+00 2659.8 1566 100.0
AagrBONN_evm.TU.Sc2ySwM_368.2798 Anthoceros agrestis HOM05D005937 ORTHO05D008151 1.1e-210 738.4 1053 41.5
Mapoly0007s0127 Marchantia polymorpha HOM05D005937 ORTHO05D008151 1.6e-209 734.6 1078 39.8
Pp3c22_15610 Physcomitrium patens HOM05D005937 ORTHO05D008151 4.1e-205 719.9 1041 40.4
Eucgr.J00183 Eucalyptus grandis HOM05D005937 ORTHO05D008151 5.8e-199 699.5 1000 39.7
Lsat_1_v5_gn_2_123720 Lactuca sativa HOM05D005937 ORTHO05D008151 9.3e-197 692.2 600 53.7
Lalb_Chr23g0277021 Lupinus albus HOM05D005937 ORTHO05D008151 3.9e-195 686.8 740 46.8
SMO141G0067 Selaginella moellendorffii HOM05D005937 ORTHO05D008151 8.7e-195 685.6 654 51.7
Atru.chr12.85 Acer truncatum HOM05D005937 ORTHO05D008151 1.5e-194 684.9 566 55.3
Phvul.001G244900 Phaseolus vulgaris HOM05D005937 ORTHO05D008151 1.5e-194 684.9 589 54.0
Os05g0468600 Oryza sativa ssp. japonica HOM05D005937 ORTHO05D008151 3.3e-194 683.7 571 55.7
Potri.010G185800 Populus trichocarpa HOM05D005937 ORTHO05D008151 3.3e-194 683.7 571 54.8
Hma1.2p1_0523F.1_g172080 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 4.3e-194 683.3 566 54.8
GSVIVG01032777001 Vitis vinifera HOM05D005937 ORTHO05D008151 4.3e-194 683.3 566 56.2
Sabra10G0143100 Salix brachista HOM05D005937 ORTHO05D008151 5.6e-194 682.9 571 54.6
Migut.F01477 Erythranthe guttata HOM05D005937 ORTHO05D008151 3.6e-193 680.2 566 54.8
ClCG11G006010 Citrullus lanatus HOM05D005937 ORTHO05D008151 4.8e-193 679.9 750 45.2
Sed0020446 Sechium edule HOM05D005937 ORTHO05D008151 4.8e-193 679.9 568 54.8
CiPaw.02G194600 Carya illinoinensis HOM05D005937 ORTHO05D008151 1.1e-192 678.7 568 54.8
Zm00001eb351780 Zea mays HOM05D005937 ORTHO05D008151 1.4e-192 678.3 568 56.0
FvH4_7g24830 Fragaria vesca HOM05D005937 ORTHO05D008151 2.4e-192 677.6 568 55.1
FAN01G2918 Fragaria x ananassa HOM05D005937 ORTHO05D008151 2.4e-192 677.6 568 55.1
Haze_17256 Corylus avellana HOM05D005937 ORTHO05D008151 6.9e-192 676.0 567 55.0
FAN06G2004 Fragaria x ananassa HOM05D005937 ORTHO05D008151 6.9e-192 676.0 568 54.9
THA.LOC104824329 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 6.9e-192 676.0 568 55.5
Lj6g0019628 Lotus japonicus HOM05D005937 ORTHO05D008151 1.2e-191 675.2 566 55.7
A09p48990 Brassica napus HOM05D005937 ORTHO05D008151 1.5e-191 674.9 576 54.0
BraA09t40354Z Brassica rapa HOM05D005937 ORTHO05D008151 1.5e-191 674.9 576 54.0
Thhalv10005783m.g Eutrema salsugineum HOM05D005937 ORTHO05D008151 1.5e-191 674.9 589 53.1
THA.LOC104811372 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 1.5e-191 674.9 571 54.6
Carub.0005s2277 Capsella rubella HOM05D005937 ORTHO05D008151 2.0e-191 674.5 566 54.4
Ca_15144_v3 Cicer arietinum L. HOM05D005937 ORTHO05D008151 2.0e-191 674.5 1000 38.8
RcHm_v2.0_Chr1g0370701 Rosa chinensis HOM05D005937 ORTHO05D008151 2.6e-191 674.1 568 54.8
Duzib114G0783 Durio zibethinus HOM05D005937 ORTHO05D008151 3.4e-191 673.7 760 45.4
Aa31LG10G10960 Aethionema arabicum HOM05D005937 ORTHO05D008151 5.8e-191 672.9 589 52.8
CANSAT56G2579 Cannabis sativa HOM05D005937 ORTHO05D008151 9.9e-191 672.2 594 54.2
C08p31350 Brassica napus HOM05D005937 ORTHO05D008151 2.2e-190 671.0 576 53.6
CARHR166110 Cardamine hirsuta HOM05D005937 ORTHO05D008151 2.2e-190 671.0 589 53.3
CsaV3_6G001960 Cucumis sativus L. HOM05D005937 ORTHO05D008151 3.8e-190 670.2 583 52.7
Sp5g06500 Schrenkiella parvula HOM05D005937 ORTHO05D008151 3.8e-190 670.2 566 53.7
PSO017G4998 Papaver somniferum HOM05D005937 ORTHO05D008151 4.9e-190 669.8 570 54.9
TAR633G1521 Trochodendron aralioides HOM05D005937 ORTHO05D008151 6.4e-190 669.5 566 54.8
AL5G37310 Arabidopsis lyrata HOM05D005937 ORTHO05D008151 8.4e-190 669.1 568 53.3
arahy.Tifrunner.gnm1.ann1.6RBS9T Arachis hypogaea HOM05D005937 ORTHO05D008151 1.9e-189 667.9 564 54.4
Gohir.A10G239000 Gossypium hirsutum HOM05D005937 ORTHO05D008151 1.9e-189 667.9 741 44.9
arahy.Tifrunner.gnm1.ann1.0WF02T Arachis hypogaea HOM05D005937 ORTHO05D008151 2.4e-189 667.5 564 54.4
Glyma.11G231700 Glycine max HOM05D005937 ORTHO05D008151 3.2e-189 667.2 568 54.0
AT3G56040 Arabidopsis thaliana HOM05D005937 ORTHO05D008151 7.1e-189 666.0 566 53.7
TPR.G10616 Trifolium pratense HOM05D005937 ORTHO05D008151 7.1e-189 666.0 566 53.9
VMungo1383G1379 Vigna mungo HOM05D005937 ORTHO05D008151 2.1e-188 664.5 568 54.4
Medtr3g071440 Medicago truncatula HOM05D005937 ORTHO05D008151 4.6e-188 663.3 566 54.2
Cc02_g06180 Coffea canephora HOM05D005937 ORTHO05D008151 7.9e-188 662.5 566 53.7
Gorai.011G291300 Gossypium raimondii HOM05D005937 ORTHO05D008151 1.3e-187 661.8 741 44.7
Ciclev10030686m.g Citrus clementina HOM05D005937 ORTHO05D008151 1.7e-187 661.4 566 53.9
Nitab4.5_0000058g0250 Nicotiana tabacum HOM05D005937 ORTHO05D008151 1.7e-187 661.4 571 53.2
PSO170G3027 Papaver somniferum HOM05D005937 ORTHO05D008151 2.3e-187 661.0 590 53.1
Psat5g130440 Pisum sativum HOM05D005937 ORTHO05D008151 6.6e-187 659.4 566 53.9
Cfa001293 Carpinus fangiana HOM05D005937 ORTHO05D008151 1.1e-186 658.7 567 54.1
HanXRQChr07g0203141 Helianthus annuus HOM05D005937 ORTHO05D008151 1.1e-186 658.7 608 51.2
Hund15900 Selenicereus undatus HOM05D005937 ORTHO05D008151 1.1e-186 658.7 566 53.5
EL10Ac2g04871 Beta vulgaris HOM05D005937 ORTHO05D008151 1.5e-186 658.3 566 54.2
FAN03G2902 Fragaria x ananassa HOM05D005937 ORTHO05D008151 1.5e-186 658.3 573 53.8
Solyc06g051080.4 Solanum lycopersicum HOM05D005937 ORTHO05D008151 1.9e-186 657.9 574 53.3
Thecc.10G012700 Theobroma cacao HOM05D005937 ORTHO05D008151 1.9e-186 657.9 571 54.3
Sopen06g016900 Solanum pennellii HOM05D005937 ORTHO05D008151 5.6e-186 656.4 574 53.0
ATR0174G021 Amborella trichopoda HOM05D005937 ORTHO05D008151 7.3e-186 656.0 570 53.7
ECA238G3710 Erigeron canadensis HOM05D005937 ORTHO05D008151 9.6e-186 655.6 563 53.1
Nn2g10945 Nelumbo nucifera HOM05D005937 ORTHO05D008151 1.6e-185 654.8 566 54.1
MD07G1224900 Malus domestica HOM05D005937 ORTHO05D008151 2.1e-185 654.4 571 52.9
CAN.G19.18 Capsicum annuum HOM05D005937 ORTHO05D008151 2.8e-185 654.1 574 52.6
Ah.16g103770 Amaranthus hybridus HOM05D005937 ORTHO05D008151 3.6e-185 653.7 566 54.1
Nitab4.5_0000969g0030 Nicotiana tabacum HOM05D005937 ORTHO05D008151 8.1e-185 652.5 571 52.4
QL08p063536 Quercus lobata HOM05D005937 ORTHO05D008151 1.1e-184 652.1 571 52.2
TWI09G1402 Tripterygium wilfordii HOM05D005937 ORTHO05D008151 1.1e-184 652.1 566 53.0
Lj1C959G18 Lonicera japonica HOM05D005937 ORTHO05D008151 4.5e-183 646.7 575 52.3
Manes.10G010100 Manihot esculenta HOM05D005937 ORTHO05D008151 4.5e-183 646.7 574 52.6
DCAR_024814 Daucus carota HOM05D005937 ORTHO05D008151 5.8e-183 646.4 593 51.8
unitig_60.g25670 Utricularia gibba HOM05D005937 ORTHO05D008151 1.4e-181 641.7 591 52.6
Aqoxy4G02431 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 2.4e-181 641.0 571 53.2
Glyma.18G025500 Glycine max HOM05D005937 ORTHO05D008151 9.3e-181 639.0 568 52.3
Rhsim09G0179300 Rhododendron simsii HOM05D005937 ORTHO05D008151 9.3e-181 639.0 566 52.5
Prupe.2G253500 Prunus persica HOM05D005937 ORTHO05D008151 2.7e-180 637.5 566 52.7
Actinidia00667 Actinidia chinensis HOM05D005937 ORTHO05D008151 3.0e-179 634.0 569 52.2
CSS0046957 Camellia sinensis var. sinensis HOM05D005937 ORTHO05D008151 8.7e-179 632.5 583 50.8
AUR62022920 Chenopodium quinoa HOM05D005937 ORTHO05D008151 8.7e-179 632.5 566 52.3
Cpa.g.sc19.149 Carica papaya HOM05D005937 ORTHO05D008151 1.2e-175 622.1 600 49.5
PGR044G1548 Punica granatum HOM05D005937 ORTHO05D008151 2.0e-175 621.3 576 51.7
Oeu011112.1 Olea europaea HOM05D005937 ORTHO05D008151 3.8e-174 617.1 686 45.0
AUR62012278 Chenopodium quinoa HOM05D005937 ORTHO05D008151 6.5e-174 616.3 567 50.8
Duzib106G1087 Durio zibethinus HOM05D005937 ORTHO05D008151 1.0e-171 609.0 571 51.1
vmacro10023 Vaccinium macrocarpon HOM05D005937 ORTHO05D008151 2.0e-167 594.7 600 48.0
Cre12.g554250 Chlamydomonas reinhardtii HOM05D005937 ORTHO05D008151 4.2e-165 587.0 916 39.2
PRCOL_00004696 Prasinoderma coloniale HOM05D005937 ORTHO05D008151 2.1e-164 584.7 627 50.6
MELO3C008313.2 Cucumis melo HOM05D005937 ORTHO05D008151 3.9e-163 580.5 498 54.0
Gohir.D10G250900 Gossypium hirsutum HOM05D005937 ORTHO05D008151 3.3e-162 577.4 656 44.2
FAN10G1632 Fragaria x ananassa HOM05D005937 ORTHO05D008151 7.4e-162 576.2 583 48.7
MD01G1156200 Malus domestica HOM05D005937 ORTHO05D008151 4.1e-160 570.5 554 49.5
Dinv21757 Davidia involucrata HOM05D005937 ORTHO05D008151 1.8e-155 555.1 576 47.4
Peaxi162Scf00284g00620 Petunia axillaris HOM05D005937 ORTHO05D008151 3.3e-154 550.8 571 46.8
MBI15_g40751_MAGBIO Magnolia biondii HOM05D005937 ORTHO05D008151 2.6e-151 541.2 603 46.3
COL.COLO4_25772 Corchorus olitorius HOM05D005937 ORTHO05D008151 4.7e-148 530.4 571 46.1
Sc10g0002520 Simmondsia chinensis HOM05D005937 ORTHO05D008151 3.0e-147 527.7 442 55.0
SGA_v2.0_scaffold395G50730 Striga asiatica HOM05D005937 ORTHO05D008151 1.1e-141 509.2 478 52.1
HPP92_007567 Vanilla planifolia HOM05D005937 ORTHO05D008151 3.6e-132 477.6 559 44.4
Actinidia00964 Actinidia chinensis HOM05D005937 ORTHO05D008151 1.2e-98 366.3 440 41.6
Hma1.2p1_0523F.1_g172070 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 3.3e-93 348.2 261 59.8
MCO05G015 Micromonas commoda HOM05D005937 ORTHO05D008151 2.4e-83 315.5 391 44.5
HPP92_007578 Vanilla planifolia HOM05D005937 ORTHO05D008151 1.9e-80 305.8 316 47.2
CDE04G2743 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 1.0e-78 300.1 337 47.5
SEGI_34891 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 1.7e-78 299.3 209 63.2
RhsimUnG0153700 Rhododendron simsii HOM05D005937 ORTHO05D008151 2.1e-71 275.8 266 48.9
Aqoxy2G01148 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 2.7e-71 275.4 186 64.5
Aqoxy1G01260 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 6.0e-71 274.2 185 64.9
Aqoxy4G01451 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 2.3e-70 272.3 184 64.7
Rhsim12G0073000 Rhododendron simsii HOM05D005937 ORTHO05D008151 6.7e-62 244.2 264 45.1
CDE04G2646 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 1.4e-59 236.5 209 49.8
BcaB01g00040 Brassica carinata HOM05D005937 ORTHO05D008151 6.5e-49 201.1 128 68.0
HPP92_007579 Vanilla planifolia HOM05D005937 ORTHO05D008151 7.9e-47 194.1 203 44.3
BolC8t50756H Brassica oleracea HOM05D005937 ORTHO05D008151 4.8e-44 184.9 167 50.9
SEGI_09306 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 5.9e-34 151.4 143 51.7
Ah.00g001390 Amaranthus hybridus HOM05D005937 ORTHO05D008151 2.8e-28 132.5 123 49.6
vmacro09901 Vaccinium macrocarpon HOM05D003975 ORTHO05D009762 8.0e-15 87.8 104 42.3


User provided reference genes

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