Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g4839 Chara braunii HOM05D001764 ORTHO05D001946 0.0e+00 1828.9 1066 100.0
CBR_g24004 Chara braunii HOM05D001764 ORTHO05D003857 7.1e-23 114.0 193 36.3
SEGI_13176 Sequoiadendron giganteum HOM05D001764 ORTHO05D001946 3.1e-18 98.6 180 31.1
Medtr4g108870 Medicago truncatula HOM05D001764 ORTHO05D001946 2.4e-15 89.0 181 26.5
Glyma.05G025100 Glycine max HOM05D001764 ORTHO05D001946 7.1e-15 87.4 179 26.8
MBI02_g14225_MAGBIO Magnolia biondii HOM05D001764 ORTHO05D001946 7.1e-15 87.4 186 26.3
Ah.02g113720 Amaranthus hybridus HOM05D001764 ORTHO05D001946 9.3e-15 87.0 185 25.9
Psat4g049880 Pisum sativum HOM05D001764 ORTHO05D001946 1.6e-14 86.3 179 26.8
TPR.G9268 Trifolium pratense HOM05D001764 ORTHO05D001946 1.0e-13 83.6 169 26.6
Ca_21809_v3 Cicer arietinum L. HOM05D001764 ORTHO05D001946 1.3e-13 83.2 169 27.8
TPR.G35116 Trifolium pratense HOM05D001764 ORTHO05D001946 1.7e-13 82.8 167 26.9
TAR374G0441 Trochodendron aralioides HOM05D001764 ORTHO05D001946 1.7e-13 82.8 197 27.9
Nn3g17322 Nelumbo nucifera HOM05D001764 ORTHO05D001946 3.9e-13 81.6 166 30.1
Eucgr.B00534 Eucalyptus grandis HOM05D001764 ORTHO05D001946 6.6e-13 80.9 166 30.1
Lalb_Chr13g0303091 Lupinus albus HOM05D001764 ORTHO05D001946 8.7e-13 80.5 167 26.9
Nn4g23270 Nelumbo nucifera HOM05D001764 ORTHO05D001946 2.5e-12 79.0 168 29.8
Aa31LG4G4640 Aethionema arabicum HOM05D001764 ORTHO05D001946 7.3e-12 77.4 181 24.3
CANSAT78G1062 Cannabis sativa HOM05D001764 ORTHO05D001946 1.3e-11 76.6 169 26.6
Nitab4.5_0001195g0030 Nicotiana tabacum HOM05D001764 ORTHO05D001946 1.6e-11 76.3 169 26.6
TAR217G0003 Trochodendron aralioides HOM05D001764 ORTHO05D001946 2.1e-11 75.9 177 26.0
Sabra15G0087000 Salix brachista HOM05D001764 ORTHO05D001946 3.6e-11 75.1 169 26.6
Lj5A108T58 Lonicera japonica HOM05D001764 ORTHO05D001946 8.1e-11 73.9 167 27.5
Lalb_Chr07g0178161 Lupinus albus HOM05D001764 ORTHO05D001946 1.1e-10 73.6 167 24.6
Os10g0407500 Oryza sativa ssp. japonica HOM05D001764 ORTHO05D001946 1.4e-10 73.2 167 25.1
MSTRG.23004 Avicennia marina HOM05D001764 ORTHO05D001946 3.1e-10 72.0 207 24.6
Thhalv10018430m.g Eutrema salsugineum HOM05D001764 ORTHO05D001946 4.0e-10 71.6 196 23.0
TAR217G0002 Trochodendron aralioides HOM05D001764 ORTHO05D001946 4.0e-10 71.6 169 27.2
Potri.015G062000 Populus trichocarpa HOM05D001764 ORTHO05D001946 5.3e-10 71.2 169 24.9
DCAR_016575 Daucus carota HOM05D001764 ORTHO05D001946 1.2e-09 70.1 169 24.9
PGSC0003DMG400021936 Solanum tuberosum HOM05D001764 ORTHO05D001946 3.4e-09 68.6 167 23.4
TPR.G39785 Trifolium pratense HOM05D001764 ORTHO05D001946 3.4e-09 68.6 167 23.4
Os10g0426300 Oryza sativa ssp. japonica HOM05D001764 ORTHO05D001946 4.5e-09 68.2 164 25.6
THA.LOC104812092 Tarenaya hassleriana HOM05D001764 ORTHO05D001946 5.8e-09 67.8 177 24.3
CAN.G847.2 Capsicum annuum HOM05D001764 ORTHO05D001946 7.6e-09 67.4 167 24.0
Os10g0407400 Oryza sativa ssp. japonica HOM05D001764 ORTHO05D001946 1.3e-08 66.6 177 25.4
SGA_v2.0_scaffold313G48336 Striga asiatica HOM05D001764 ORTHO05D001946 1.3e-08 66.6 168 25.0
TAR217G0001 Trochodendron aralioides HOM05D001764 ORTHO05D001946 1.3e-08 66.6 178 26.4
Sabra15G0087100 Salix brachista HOM05D001764 ORTHO05D001946 1.7e-08 66.2 137 27.0
unitig_62.g23551 Utricularia gibba HOM05D001764 ORTHO05D001946 2.2e-08 65.9 183 25.1
TAR217G0004 Trochodendron aralioides HOM05D001764 ORTHO05D001946 3.8e-08 65.1 179 24.6
Nitab4.5_0001997g0090 Nicotiana tabacum HOM05D001764 ORTHO05D001946 8.4e-08 63.9 164 24.4
Peaxi162Scf00274g00352 Petunia axillaris HOM05D001764 ORTHO05D001946 8.4e-08 63.9 166 23.5
TAR371G1169 Trochodendron aralioides HOM05D001764 ORTHO05D001946 8.4e-08 63.9 181 24.9
AT5G07710 Arabidopsis thaliana HOM05D001764 ORTHO05D001946 3.2e-07 62.0 167 25.7
THA.LOC104818322 Tarenaya hassleriana HOM05D001764 ORTHO05D001946 4.2e-07 61.6 168 24.4
Migut.I00208 Erythranthe guttata HOM05D001764 ORTHO05D001946 5.4e-07 61.2 168 22.6
Peaxi162Scf00106g00421 Petunia axillaris HOM05D001764 ORTHO05D001946 5.4e-07 61.2 169 21.9
C06p48550 Brassica napus HOM05D001764 ORTHO05D001946 7.1e-07 60.8 167 22.8
AL6G18080 Arabidopsis lyrata HOM05D001764 ORTHO05D001946 1.2e-06 60.1 167 25.7
CARHR067650 Cardamine hirsuta HOM05D001764 ORTHO05D001946 1.2e-06 60.1 183 21.9
Eucgr.K01202 Eucalyptus grandis HOM05D001764 ORTHO05D001946 1.2e-06 60.1 133 28.6
A07p40200 Brassica napus HOM05D001764 ORTHO05D001946 4.6e-06 58.2 167 21.6
Oeu052451.1 Olea europaea HOM05D001764 ORTHO05D001946 4.6e-06 58.2 169 21.9
BolC6t39884H Brassica oleracea HOM05D001764 ORTHO05D001946 7.9e-06 57.4 167 21.6


User provided reference genes

Program Settings