Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g23403 Chara braunii HOM05D004853 ORTHO05D005865 1.6e-175 619.4 336 100.0
CBR_g40148 Chara braunii HOM05D004853 ORTHO05D005865 2.1e-154 549.3 322 90.4
Sabra15G0112700 Salix brachista HOM05D004853 ORTHO05D005865 4.9e-87 325.5 322 57.1
Potri.015G090600 Populus trichocarpa HOM05D004853 ORTHO05D005865 1.4e-86 323.9 322 57.1
TAR623G1093 Trochodendron aralioides HOM05D004853 ORTHO05D005865 4.1e-86 322.4 324 54.3
TAR376G0972 Trochodendron aralioides HOM05D004853 ORTHO05D005865 7.0e-86 321.6 324 54.6
SEGI_13565 Sequoiadendron giganteum HOM05D004853 ORTHO05D005865 9.2e-86 321.2 324 56.2
ClCG09G008800 Citrullus lanatus HOM05D004853 ORTHO05D005865 6.0e-85 318.5 325 55.1
Haze_15035 Corylus avellana HOM05D004853 ORTHO05D005865 7.8e-85 318.2 322 55.6
Cfa004377 Carpinus fangiana HOM05D004853 ORTHO05D005865 3.0e-84 316.2 322 55.3
CsaV3_7G026150 Cucumis sativus L. HOM05D004853 ORTHO05D005865 3.9e-84 315.8 325 53.2
EL10Ac7g17891 Beta vulgaris HOM05D004853 ORTHO05D005865 5.1e-84 315.5 322 53.1
QL09p051756 Quercus lobata HOM05D004853 ORTHO05D005865 5.1e-84 315.5 324 55.9
Ciclev10019411m.g Citrus clementina HOM05D004853 ORTHO05D005865 6.6e-84 315.1 324 56.2
QL09p052469 Quercus lobata HOM05D004853 ORTHO05D005865 6.6e-84 315.1 324 55.6
Sed0013559 Sechium edule HOM05D004853 ORTHO05D005865 8.6e-84 314.7 325 54.5
MBI19_g34091_MAGBIO Magnolia biondii HOM05D004853 ORTHO05D005865 1.1e-83 314.3 322 55.9
Aqoxy1G00113 Aquilegia oxysepala HOM05D004853 ORTHO05D005865 1.5e-83 313.9 322 55.0
MELO3C021058.2 Cucumis melo HOM05D004853 ORTHO05D005865 1.9e-83 313.5 325 52.9
Prupe.8G199700 Prunus persica HOM05D004853 ORTHO05D005865 1.9e-83 313.5 328 57.0
Nn7g37081 Nelumbo nucifera HOM05D004853 ORTHO05D005865 7.3e-83 311.6 324 54.6
MD10G1160500 Malus domestica HOM05D004853 ORTHO05D005865 9.5e-83 311.2 325 54.8
Aa31LG8G11930 Aethionema arabicum HOM05D004853 ORTHO05D005865 1.2e-82 310.8 331 52.9
Manes.13G048900 Manihot esculenta HOM05D004853 ORTHO05D005865 1.2e-82 310.8 322 55.3
MD05G1172300 Malus domestica HOM05D004853 ORTHO05D005865 1.6e-82 310.5 325 55.1
Sc17g0002190 Simmondsia chinensis HOM05D004853 ORTHO05D005865 1.6e-82 310.5 324 54.6
CSS0034871 Camellia sinensis var. sinensis HOM05D004853 ORTHO05D005865 2.1e-82 310.1 324 55.6
CDE07G1728 Ceratophyllum demersum HOM05D004853 ORTHO05D005865 2.1e-82 310.1 322 53.7
CiPaw.02G023000 Carya illinoinensis HOM05D004853 ORTHO05D005865 2.8e-82 309.7 329 52.0
CiPaw.01G049500 Carya illinoinensis HOM05D004853 ORTHO05D005865 4.7e-82 308.9 324 55.2
C07p10970 Brassica napus HOM05D004853 ORTHO05D005865 8.1e-82 308.1 331 48.0
BraA03t13534Z Brassica rapa HOM05D004853 ORTHO05D005865 8.1e-82 308.1 323 52.9
TWI36G0697 Tripterygium wilfordii HOM05D004853 ORTHO05D005865 8.1e-82 308.1 325 54.2
CARHR101430 Cardamine hirsuta HOM05D004853 ORTHO05D005865 1.1e-81 307.8 323 51.4
PSO384G4190 Papaver somniferum HOM05D004853 ORTHO05D005865 1.4e-81 307.4 322 53.4
THA.LOC104808789 Tarenaya hassleriana HOM05D004853 ORTHO05D005865 1.4e-81 307.4 332 52.7
Atru.chr6.1420 Acer truncatum HOM05D004853 ORTHO05D005865 1.8e-81 307.0 325 54.5
AL706U10010 Arabidopsis lyrata HOM05D004853 ORTHO05D005865 1.8e-81 307.0 322 51.9
BcaC06g35779 Brassica carinata HOM05D004853 ORTHO05D005865 1.8e-81 307.0 327 51.7
A03p44030 Brassica napus HOM05D004853 ORTHO05D005865 1.8e-81 307.0 322 52.5
BolC7t41562H Brassica oleracea HOM05D004853 ORTHO05D005865 1.8e-81 307.0 327 51.7
Thecc.01G221500 Theobroma cacao HOM05D004853 ORTHO05D005865 1.8e-81 307.0 330 50.6
AL3G40790 Arabidopsis lyrata HOM05D004853 ORTHO05D005865 2.3e-81 306.6 324 52.8
AUR62038821 Chenopodium quinoa HOM05D004853 ORTHO05D005865 2.3e-81 306.6 322 48.4
Sp3g22680 Schrenkiella parvula HOM05D004853 ORTHO05D005865 3.1e-81 306.2 333 53.2
AT3G25100 Arabidopsis thaliana HOM05D004853 ORTHO05D005865 4.0e-81 305.8 322 52.5
BcaB08g34434 Brassica carinata HOM05D004853 ORTHO05D005865 5.2e-81 305.4 324 53.4
AUR62043704 Chenopodium quinoa HOM05D004853 ORTHO05D005865 5.2e-81 305.4 322 48.1
BcaB06g26724 Brassica carinata HOM05D004853 ORTHO05D005865 6.8e-81 305.1 326 53.1
Carub.0003s2543 Capsella rubella HOM05D004853 ORTHO05D005865 6.8e-81 305.1 326 52.8
Gohir.D07G206000 Gossypium hirsutum HOM05D004853 ORTHO05D005865 6.8e-81 305.1 328 53.0
Gorai.001G232300 Gossypium raimondii HOM05D004853 ORTHO05D005865 6.8e-81 305.1 328 53.0
COL.COLO4_15628 Corchorus olitorius HOM05D004853 ORTHO05D005865 8.9e-81 304.7 328 54.0
Actinidia09471 Actinidia chinensis HOM05D004853 ORTHO05D005865 1.2e-80 304.3 324 55.6
Eucgr.H00778 Eucalyptus grandis HOM05D004853 ORTHO05D005865 1.2e-80 304.3 322 53.4
Thhalv10002454m.g Eutrema salsugineum HOM05D004853 ORTHO05D005865 1.2e-80 304.3 323 51.7
Ah.15g093470 Amaranthus hybridus HOM05D004853 ORTHO05D005865 1.5e-80 303.9 324 51.2
BcaC01g03244 Brassica carinata HOM05D004853 ORTHO05D005865 2.0e-80 303.5 322 52.8
C03p54420 Brassica napus HOM05D004853 ORTHO05D005865 2.0e-80 303.5 322 52.8
BolC3t17728H Brassica oleracea HOM05D004853 ORTHO05D005865 2.0e-80 303.5 322 52.8
BraA07t28514Z Brassica rapa HOM05D004853 ORTHO05D005865 2.0e-80 303.5 325 48.6
Gohir.A07G199600 Gossypium hirsutum HOM05D004853 ORTHO05D005865 2.6e-80 303.1 328 52.7
CANSAT01G2121 Cannabis sativa HOM05D004853 ORTHO05D005865 3.4e-80 302.8 322 54.7
RcHm_v2.0_Chr6g0284201 Rosa chinensis HOM05D004853 ORTHO05D005865 3.4e-80 302.8 325 54.5
Duzib133G1132 Durio zibethinus HOM05D004853 ORTHO05D005865 4.4e-80 302.4 324 53.4
Duzib138G1868 Durio zibethinus HOM05D004853 ORTHO05D005865 4.4e-80 302.4 330 53.0
Aa31LG9G4920 Aethionema arabicum HOM05D004853 ORTHO05D005865 5.8e-80 302.0 327 53.5
Dinv12655 Davidia involucrata HOM05D004853 ORTHO05D005865 5.8e-80 302.0 324 52.5
A07p07260 Brassica napus HOM05D004853 ORTHO05D005865 7.5e-80 301.6 325 49.8
Actinidia23713 Actinidia chinensis HOM05D004853 ORTHO05D005865 1.3e-79 300.8 324 54.9
Gorai.007G156000 Gossypium raimondii HOM05D004853 ORTHO05D005865 1.3e-79 300.8 324 49.7
FvH4_2g18640 Fragaria vesca HOM05D004853 ORTHO05D005865 2.2e-79 300.1 324 51.5
FAN15G3437 Fragaria x ananassa HOM05D004853 ORTHO05D005865 2.2e-79 300.1 324 51.5
FAN27G1226 Fragaria x ananassa HOM05D004853 ORTHO05D005865 2.9e-79 299.7 324 51.5
FAN24G1506 Fragaria x ananassa HOM05D004853 ORTHO05D005865 1.1e-78 297.7 325 52.6
Lj3C839T9 Lonicera japonica HOM05D004853 ORTHO05D005865 1.1e-78 297.7 322 51.6
unitig_899.g15017 Utricularia gibba HOM05D004853 ORTHO05D005865 1.1e-78 297.7 322 53.1
Peaxi162Scf00238g00032 Petunia axillaris HOM05D004853 ORTHO05D005865 3.2e-78 296.2 322 54.0
CSS0045377 Camellia sinensis var. sinensis HOM05D004853 ORTHO05D005865 5.4e-78 295.4 312 54.8
Cc01_g16780 Coffea canephora HOM05D004853 ORTHO05D005865 7.1e-78 295.0 324 52.8
Hma1.2p1_0226F.1_g095440 Hydrangea macrophylla HOM05D004853 ORTHO05D005865 9.2e-78 294.7 322 53.7
Hma1.2p1_2668F.1_g326580 Hydrangea macrophylla HOM05D004853 ORTHO05D005865 9.2e-78 294.7 322 53.7
Nitab4.5_0000045g0440 Nicotiana tabacum HOM05D004853 ORTHO05D005865 3.5e-77 292.7 322 52.5
MSTRG.18839 Avicennia marina HOM05D004853 ORTHO05D005865 4.6e-77 292.4 322 52.8
Nitab4.5_0007437g0010 Nicotiana tabacum HOM05D004853 ORTHO05D005865 4.6e-77 292.4 322 52.2
Cpa.g.sc43.113 Carica papaya HOM05D004853 ORTHO05D005865 6.0e-77 292.0 335 50.7
SalBow6G4054 Salvia bowleyana HOM05D004853 ORTHO05D005865 1.0e-76 291.2 322 52.8
Lalb_Chr03g0041521 Lupinus albus HOM05D004853 ORTHO05D005865 1.3e-76 290.8 324 52.5
DCAR_004725 Daucus carota HOM05D004853 ORTHO05D005865 1.7e-76 290.4 322 53.4
Os11g0128400 Oryza sativa ssp. japonica HOM05D004853 ORTHO05D005865 1.7e-76 290.4 327 51.1
Os12g0124700 Oryza sativa ssp. japonica HOM05D004853 ORTHO05D005865 2.3e-76 290.0 325 49.5
unitig_736.g22343 Utricularia gibba HOM05D004853 ORTHO05D005865 3.0e-76 289.7 325 51.4
Rhsim09G0044900 Rhododendron simsii HOM05D004853 ORTHO05D005865 3.9e-76 289.3 324 52.2
Lsat_1_v5_gn_8_89600 Lactuca sativa HOM05D004853 ORTHO05D005865 6.6e-76 288.5 322 52.2
SMO307G0064 Selaginella moellendorffii HOM05D004853 ORTHO05D005865 1.1e-75 287.7 329 53.2
PGSC0003DMG400027946 Solanum tuberosum HOM05D004853 ORTHO05D005865 1.5e-75 287.3 322 52.8
Phvul.008G130700 Phaseolus vulgaris HOM05D004853 ORTHO05D005865 1.9e-75 287.0 322 50.9
Gohir.D07G205900 Gossypium hirsutum HOM05D004853 ORTHO05D005865 3.3e-75 286.2 313 52.4
Sopen09g022590 Solanum pennellii HOM05D004853 ORTHO05D005865 3.3e-75 286.2 322 52.2
Oeu037767.1 Olea europaea HOM05D004853 ORTHO05D005865 5.6e-75 285.4 324 50.9
Solyc09g059440.1 Solanum lycopersicum HOM05D004853 ORTHO05D005865 7.3e-75 285.0 324 50.9
Zm00001eb405460 Zea mays HOM05D004853 ORTHO05D005865 2.1e-74 283.5 332 48.2
CAN.G257.5 Capsicum annuum HOM05D004853 ORTHO05D005865 8.1e-74 281.6 322 51.6
CAN.G128.1 Capsicum annuum HOM05D004853 ORTHO05D005865 1.8e-73 280.4 322 51.6
SGA_v2.0_scaffold18G08333 Striga asiatica HOM05D004853 ORTHO05D005865 2.4e-73 280.0 322 50.6
Medtr7g056153 Medicago truncatula HOM05D004853 ORTHO05D005865 8.9e-73 278.1 331 50.2
Psat3g148200 Pisum sativum HOM05D004853 ORTHO05D005865 3.4e-72 276.2 335 50.1
TPR.G6418 Trifolium pratense HOM05D004853 ORTHO05D005865 3.4e-72 276.2 337 49.3
Glyma.08G349400 Glycine max HOM05D004853 ORTHO05D005865 5.8e-72 275.4 322 50.0
Glyma.18G167000 Glycine max HOM05D004853 ORTHO05D005865 1.7e-71 273.9 323 50.8
CDE04G0889 Ceratophyllum demersum HOM05D004853 ORTHO05D005865 2.9e-71 273.1 322 45.7
Ca_06554_v3 Cicer arietinum L. HOM05D004853 ORTHO05D005865 8.4e-71 271.6 342 48.2
HanXRQChr10g0288791 Helianthus annuus HOM05D004853 ORTHO05D005865 1.1e-70 271.2 322 50.3
HanXRQChr14g0439971 Helianthus annuus HOM05D004853 ORTHO05D005865 4.2e-70 269.2 323 50.2
VMungo1383G0658 Vigna mungo HOM05D004853 ORTHO05D005865 2.7e-69 266.5 322 50.0
Lj1g0018468 Lotus japonicus HOM05D004853 ORTHO05D005865 8.7e-68 261.5 326 48.8
Mapoly0045s0042 Marchantia polymorpha HOM05D004853 ORTHO05D005865 1.5e-67 260.8 322 46.6
ECA236G0997 Erigeron canadensis HOM05D004853 ORTHO05D005865 1.6e-66 257.3 322 48.1
GSVIVG01000797001 Vitis vinifera HOM05D004853 ORTHO05D005865 2.8e-66 256.5 193 60.6
Pp3c23_19980 Physcomitrium patens HOM05D004853 ORTHO05D005865 6.2e-66 255.4 323 44.0
Gohir.D11G145500 Gossypium hirsutum HOM05D004853 ORTHO05D005865 8.1e-66 255.0 281 48.8
Migut.D02501 Erythranthe guttata HOM05D004853 ORTHO05D005865 1.4e-65 254.2 330 47.9
ATR0068G062 Amborella trichopoda HOM05D004853 ORTHO05D005865 4.4e-64 249.2 193 59.1
Gorai.001G232100 Gossypium raimondii HOM05D004853 ORTHO05D005865 3.9e-60 236.1 311 43.1
DCAR_004733 Daucus carota HOM05D004853 ORTHO05D005865 6.6e-60 235.3 275 52.7
Gohir.A11G139300 Gossypium hirsutum HOM05D004853 ORTHO05D005865 2.1e-58 230.3 315 45.7
AagrBONN_evm.TU.Sc2ySwM_117.731 Anthoceros agrestis HOM05D004853 ORTHO05D005865 2.7e-53 213.4 338 37.9
Gohir.A07G199500 Gossypium hirsutum HOM05D004853 ORTHO05D005865 7.6e-48 195.3 282 44.7
MCO03G169 Micromonas commoda HOM05D004853 ORTHO05D005865 1.3e-47 194.5 346 41.6
CAN.G186.62 Capsicum annuum HOM05D004853 ORTHO05D005865 8.4e-47 191.8 177 55.4
CSS0009877 Camellia sinensis var. sinensis HOM05D004853 ORTHO05D005865 1.9e-43 180.6 219 46.1
Dinv19180 Davidia involucrata HOM05D004853 ORTHO05D005865 4.0e-41 172.9 322 39.4
PRCOL_00002078 Prasinoderma coloniale HOM05D004853 ORTHO05D005865 6.5e-39 165.6 326 34.7
Sabra02G0118100 Salix brachista HOM05D004853 ORTHO05D005865 1.9e-35 154.1 139 55.4
arahy.Tifrunner.gnm1.ann1.23GIHT Arachis hypogaea HOM05D004853 ORTHO05D005865 6.1e-29 132.5 296 36.5
Zm00001eb163660 Zea mays HOM05D004853 ORTHO05D005865 1.4e-25 121.3 98 58.2
HPP92_007506 Vanilla planifolia HOM05D004853 ORTHO05D005865 2.2e-15 87.4 155 41.9
Cre06.g270250 Chlamydomonas reinhardtii HOM05D004853 ORTHO05D005865 1.9e-14 84.3 324 27.2
ECA233G3738 Erigeron canadensis HOM05D004853 ORTHO05D005865 1.4e-12 78.2 82 45.1
AUR62016553 Chenopodium quinoa HOM05D004853 ORTHO05D005865 4.2e-06 56.6 42 59.5
Ah.03g146210 Amaranthus hybridus HOM05D004853 ORTHO05D005865 9.4e-06 55.5 80 40.0


User provided reference genes

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