Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g162 Chara braunii HOM05D006037 ORTHO05D007384 3.5e-233 811.2 396 100.0
Pp3c15_25940 Physcomitrium patens HOM05D006037 ORTHO05D007384 4.9e-62 242.7 357 39.2
Mapoly0042s0034 Marchantia polymorpha HOM05D006037 ORTHO05D007384 4.2e-61 239.6 368 37.5
CiPaw.05G240100 Carya illinoinensis HOM05D006037 ORTHO05D007384 1.6e-60 237.7 356 39.3
CDE12G0065 Ceratophyllum demersum HOM05D006037 ORTHO05D007384 6.0e-60 235.7 355 38.3
Potri.010G122100 Populus trichocarpa HOM05D006037 ORTHO05D007384 6.0e-60 235.7 355 38.3
CANSAT01G2894 Cannabis sativa HOM05D006037 ORTHO05D007384 1.7e-59 234.2 356 37.9
Sabra10G0092100 Salix brachista HOM05D006037 ORTHO05D007384 3.9e-59 233.0 355 37.5
AagrBONN_evm.TU.Sc2ySwM_117.146 Anthoceros agrestis HOM05D006037 ORTHO05D007384 6.6e-59 232.3 353 38.5
Sabra10G0092200 Salix brachista HOM05D006037 ORTHO05D007384 8.7e-59 231.9 355 37.7
VMungo0720G2449 Vigna mungo HOM05D006037 ORTHO05D007384 1.5e-58 231.1 355 38.0
GSVIVG01011862001 Vitis vinifera HOM05D006037 ORTHO05D007384 1.5e-58 231.1 356 38.5
Phvul.007G029700 Phaseolus vulgaris HOM05D006037 ORTHO05D007384 3.3e-58 229.9 355 37.2
Lj5g0002773 Lotus japonicus HOM05D006037 ORTHO05D007384 7.3e-58 228.8 356 37.6
EL10Ac6g14338 Beta vulgaris HOM05D006037 ORTHO05D007384 9.6e-58 228.4 355 38.0
Potri.010G122000 Populus trichocarpa HOM05D006037 ORTHO05D007384 9.6e-58 228.4 355 37.7
Aa31LG7G9120 Aethionema arabicum HOM05D006037 ORTHO05D007384 1.3e-57 228.0 355 36.3
Manes.14G105200 Manihot esculenta HOM05D006037 ORTHO05D007384 1.6e-57 227.6 360 36.1
BcaC05g26674 Brassica carinata HOM05D006037 ORTHO05D007384 2.8e-57 226.9 335 39.4
DCAR_007255 Daucus carota HOM05D006037 ORTHO05D007384 2.8e-57 226.9 335 39.1
AUR62037303 Chenopodium quinoa HOM05D006037 ORTHO05D007384 3.6e-57 226.5 335 39.7
Peaxi162Scf00753g00122 Petunia axillaris HOM05D006037 ORTHO05D007384 3.6e-57 226.5 354 39.0
Sc11g0003550 Simmondsia chinensis HOM05D006037 ORTHO05D007384 3.6e-57 226.5 374 36.1
unitig_747.g21203 Utricularia gibba HOM05D006037 ORTHO05D007384 3.6e-57 226.5 337 40.7
CAN.G610.57 Capsicum annuum HOM05D006037 ORTHO05D007384 4.8e-57 226.1 354 37.9
MD16G1039700 Malus domestica HOM05D006037 ORTHO05D007384 6.2e-57 225.7 356 36.2
RcHm_v2.0_Chr4g0434781 Rosa chinensis HOM05D006037 ORTHO05D007384 8.1e-57 225.3 357 36.4
C05p25140 Brassica napus HOM05D006037 ORTHO05D007384 1.1e-56 224.9 355 37.7
BolC5t31246H Brassica oleracea HOM05D006037 ORTHO05D007384 1.1e-56 224.9 355 37.7
Eucgr.B02995 Eucalyptus grandis HOM05D006037 ORTHO05D007384 1.1e-56 224.9 356 38.5
HanXRQChr17g0551931 Helianthus annuus HOM05D006037 ORTHO05D007384 1.1e-56 224.9 335 40.9
MBI09_g07743_MAGBIO Magnolia biondii HOM05D006037 ORTHO05D007384 1.1e-56 224.9 337 38.3
AT1G25375 Arabidopsis thaliana HOM05D006037 ORTHO05D007384 1.4e-56 224.6 335 37.6
Duzib248G1272 Durio zibethinus HOM05D006037 ORTHO05D007384 1.4e-56 224.6 359 37.3
Medtr1g110300 Medicago truncatula HOM05D006037 ORTHO05D007384 1.4e-56 224.6 372 36.3
Nitab4.5_0001616g0090 Nicotiana tabacum HOM05D006037 ORTHO05D007384 1.4e-56 224.6 370 37.8
SalBow8G2496 Salvia bowleyana HOM05D006037 ORTHO05D007384 1.4e-56 224.6 335 39.4
SalBow8G4457 Salvia bowleyana HOM05D006037 ORTHO05D007384 1.4e-56 224.6 335 39.4
AUR62002838 Chenopodium quinoa HOM05D006037 ORTHO05D007384 3.1e-56 223.4 356 37.4
COL.COLO4_38215 Corchorus olitorius HOM05D006037 ORTHO05D007384 3.1e-56 223.4 347 39.5
Nn3g17908 Nelumbo nucifera HOM05D006037 ORTHO05D007384 4.0e-56 223.0 354 39.0
Thhalv10007371m.g Eutrema salsugineum HOM05D006037 ORTHO05D007384 5.3e-56 222.6 337 38.3
Lalb_Chr06g0165941 Lupinus albus HOM05D006037 ORTHO05D007384 5.3e-56 222.6 355 38.0
SMO164G0020 Selaginella moellendorffii HOM05D006037 ORTHO05D007384 5.3e-56 222.6 303 40.3
Sopen05g004860 Solanum pennellii HOM05D006037 ORTHO05D007384 5.3e-56 222.6 301 41.9
SGA_v2.0_scaffold38G14964 Striga asiatica HOM05D006037 ORTHO05D000229 5.3e-56 222.6 366 37.7
Carub.0001s2514 Capsella rubella HOM05D006037 ORTHO05D007384 9.0e-56 221.9 335 37.6
Lsat_1_v5_gn_3_57741 Lactuca sativa HOM05D006037 ORTHO05D007384 9.0e-56 221.9 340 39.4
PSO478G0980 Papaver somniferum HOM05D006037 ORTHO05D007384 9.0e-56 221.9 347 37.5
Solyc05g009140.3 Solanum lycopersicum HOM05D006037 ORTHO05D007384 9.0e-56 221.9 301 41.9
Aqoxy3G00235 Aquilegia oxysepala HOM05D006037 ORTHO05D007384 1.5e-55 221.1 346 38.2
AL1G39950 Arabidopsis lyrata HOM05D006037 ORTHO05D007384 1.5e-55 221.1 335 37.6
Prupe.1G314400 Prunus persica HOM05D006037 ORTHO05D007384 1.5e-55 221.1 356 35.4
A09p39240 Brassica napus HOM05D006037 ORTHO05D007384 2.0e-55 220.7 335 38.8
BraA09t39423Z Brassica rapa HOM05D006037 ORTHO05D007384 2.0e-55 220.7 335 38.8
TAR622G1007 Trochodendron aralioides HOM05D006037 ORTHO05D007384 2.0e-55 220.7 339 38.6
AUR62002836 Chenopodium quinoa HOM05D006037 ORTHO05D007384 2.6e-55 220.3 302 41.7
ECA246G3707 Erigeron canadensis HOM05D006037 ORTHO05D007384 3.4e-55 219.9 340 39.7
Os01g0133500 Oryza sativa ssp. japonica HOM05D006037 ORTHO05D007384 3.4e-55 219.9 312 38.8
Psat6g225720 Pisum sativum HOM05D006037 ORTHO05D007384 3.4e-55 219.9 355 36.9
FvH4_4g26975 Fragaria vesca HOM05D006037 ORTHO05D007384 4.4e-55 219.5 357 35.6
Nitab4.5_0005528g0030 Nicotiana tabacum HOM05D006037 ORTHO05D007384 4.4e-55 219.5 370 37.6
TPR.G4859 Trifolium pratense HOM05D006037 ORTHO05D007384 4.4e-55 219.5 335 39.7
arahy.Tifrunner.gnm1.ann1.NA36PT Arachis hypogaea HOM05D006037 ORTHO05D007384 5.8e-55 219.2 335 39.1
FAN22G1751 Fragaria x ananassa HOM05D006037 ORTHO05D007384 5.8e-55 219.2 367 35.1
Glyma.20G118000 Glycine max HOM05D006037 ORTHO05D007384 9.9e-55 218.4 355 36.6
PSO017G5347 Papaver somniferum HOM05D006037 ORTHO05D007384 9.9e-55 218.4 347 37.5
Atru.chr11.165 Acer truncatum HOM05D006037 ORTHO05D007384 1.3e-54 218.0 359 35.9
Cc11_g09830 Coffea canephora HOM05D006037 ORTHO05D007384 1.3e-54 218.0 356 37.1
MD13G1039000 Malus domestica HOM05D006037 ORTHO05D007384 1.3e-54 218.0 357 34.2
Gorai.005G192200 Gossypium raimondii HOM05D006037 ORTHO05D007384 1.7e-54 217.6 355 36.1
THA.LOC104821921 Tarenaya hassleriana HOM05D006037 ORTHO05D007384 1.7e-54 217.6 355 36.1
arahy.Tifrunner.gnm1.ann1.CBB0MY Arachis hypogaea HOM05D006037 ORTHO05D007384 2.2e-54 217.2 335 39.1
Ca_11141_v3 Cicer arietinum L. HOM05D006037 ORTHO05D007384 2.2e-54 217.2 345 38.0
Ca_11146_v3 Cicer arietinum L. HOM05D006037 ORTHO05D007384 2.2e-54 217.2 345 38.0
FAN12G3404 Fragaria x ananassa HOM05D006037 ORTHO05D007384 2.2e-54 217.2 356 35.4
Ciclev10014910m.g Citrus clementina HOM05D006037 ORTHO05D007384 2.9e-54 216.9 355 35.5
Gohir.D02G171000 Gossypium hirsutum HOM05D006037 ORTHO05D007384 2.9e-54 216.9 355 36.1
Rhsim09G0105100 Rhododendron simsii HOM05D006037 ORTHO05D007384 8.4e-54 215.3 302 39.7
MSTRG.7652 Avicennia marina HOM05D006037 ORTHO05D007384 1.4e-53 214.5 335 38.5
CSS0026176 Camellia sinensis var. sinensis HOM05D006037 ORTHO05D007384 1.4e-53 214.5 335 38.5
CSS0045711 Camellia sinensis var. sinensis HOM05D006037 ORTHO05D007384 1.4e-53 214.5 335 38.5
Haze_00627 Corylus avellana HOM05D006037 ORTHO05D007384 2.4e-53 213.8 399 34.8
Gohir.A03G147800 Gossypium hirsutum HOM05D006037 ORTHO05D007384 3.2e-53 213.4 354 36.4
Actinidia14911 Actinidia chinensis HOM05D006037 ORTHO05D007384 2.1e-52 210.7 314 38.5
ATR1125G090 Amborella trichopoda HOM05D006037 ORTHO05D007384 2.1e-52 210.7 302 40.4
PGR102G0142 Punica granatum HOM05D006037 ORTHO05D007384 3.5e-52 209.9 363 35.8
Thecc.02G224800 Theobroma cacao HOM05D006037 ORTHO05D007384 1.3e-51 208.0 335 36.4
vmacro10580 Vaccinium macrocarpon HOM05D006037 ORTHO05D007384 1.3e-51 208.0 332 38.6
Zm00001eb125200 Zea mays HOM05D006037 ORTHO05D007384 1.3e-51 208.0 302 37.7
Aa31LG7G9130 Aethionema arabicum HOM05D006037 ORTHO05D007384 2.8e-49 200.3 328 35.4
Migut.L01043 Erythranthe guttata HOM05D006037 ORTHO05D007384 1.4e-48 198.0 356 37.1
TAR622G1402 Trochodendron aralioides HOM05D006037 ORTHO05D007384 1.7e-46 191.0 301 38.9
BcaC05g26470 Brassica carinata HOM05D006037 ORTHO05D007384 2.7e-44 183.7 335 35.8
AUR62037301 Chenopodium quinoa HOM05D006037 ORTHO05D007384 3.0e-43 180.3 471 29.7
Lj3C1012T17 Lonicera japonica HOM05D006037 ORTHO05D007384 5.8e-39 166.0 367 32.7
Cpa.g.sc65.52 Carica papaya HOM05D006037 ORTHO05D007384 3.2e-37 160.2 354 29.7
HPP92_008271 Vanilla planifolia HOM05D006037 ORTHO05D007384 4.2e-37 159.8 245 38.0
TWI31G0909 Tripterygium wilfordii HOM05D006037 ORTHO05D007384 2.3e-35 154.1 302 33.4
CARHR026110 Cardamine hirsuta HOM05D006037 ORTHO05D007384 2.0e-31 141.0 226 36.7
PGSC0003DMG401014554 Solanum tuberosum HOM05D006037 ORTHO05D007384 2.5e-29 134.0 192 39.1
RcHm_v2.0_Chr5g0042931 Rosa chinensis HOM05D006037 ORTHO05D007384 1.3e-27 128.3 302 30.8
RcHm_v2.0_Chr7g0243441 Rosa chinensis HOM05D006037 ORTHO05D007384 1.8e-27 127.9 303 31.4
QL01p040421 Quercus lobata HOM05D006037 ORTHO05D007384 5.1e-27 126.3 135 45.9
BcaC05g26471 Brassica carinata HOM05D006037 ORTHO05D007384 3.3e-26 123.6 216 34.3
RcHm_v2.0_Chr6g0261541 Rosa chinensis HOM05D006037 ORTHO05D007384 6.5e-22 109.4 233 32.2
QL01p040434 Quercus lobata HOM05D006037 ORTHO05D007384 2.7e-20 104.0 200 35.5
Dinv21054 Davidia involucrata HOM05D006037 ORTHO05D007384 2.3e-19 100.9 217 31.8
FAN07G1837 Fragaria x ananassa HOM05D006037 ORTHO05D007384 2.0e-18 97.8 188 32.4
Ah.02g127690 Amaranthus hybridus HOM05D006037 ORTHO05D007384 2.5e-13 80.9 96 41.7
Hma1.2p1_1024F.1_g249220 Hydrangea macrophylla HOM05D006037 ORTHO05D007384 6.7e-11 72.8 89 43.8
QL02p008285 Quercus lobata HOM05D000178 ORTHO05D007384 2.6e-07 60.8 79 40.5
Oeu054976.1 Olea europaea HOM05D006037 ORTHO05D007384 5.0e-06 56.6 78 38.5


User provided reference genes

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