Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g12802 Chara braunii HOM05D000834 ORTHO05D006956 1.2e-211 739.6 376 100.0
SEGI_11456 Sequoiadendron giganteum HOM05D000834 ORTHO05D006956 1.1e-119 434.1 345 60.3
AagrBONN_evm.TU.Sc2ySwM_368.182 Anthoceros agrestis HOM05D000834 ORTHO05D006956 6.6e-117 424.9 335 60.3
Lalb_Chr02g0152761 Lupinus albus HOM05D000834 ORTHO05D006956 6.8e-114 414.8 344 57.3
Prupe.8G214700 Prunus persica HOM05D000834 ORTHO05D006956 8.9e-114 414.5 344 57.3
Eucgr.K01422 Eucalyptus grandis HOM05D000834 ORTHO05D006956 2.6e-113 412.9 340 58.2
CiPaw.03G271600 Carya illinoinensis HOM05D000834 ORTHO05D006956 4.4e-113 412.1 344 57.3
Potri.014G193300 Populus trichocarpa HOM05D000834 ORTHO05D006956 7.6e-113 411.4 340 56.8
Migut.D00483 Erythranthe guttata HOM05D000834 ORTHO05D006956 9.9e-113 411.0 340 56.8
MD05G1187700 Malus domestica HOM05D000834 ORTHO05D006956 4.9e-112 408.7 344 57.3
CANSAT01G0496 Cannabis sativa HOM05D000834 ORTHO05D006956 6.4e-112 408.3 344 57.0
CANSAT01G1591 Cannabis sativa HOM05D000834 ORTHO05D006956 6.4e-112 408.3 344 57.0
QL09p041638 Quercus lobata HOM05D000834 ORTHO05D006956 6.4e-112 408.3 340 57.1
PGR044G1351 Punica granatum HOM05D000834 ORTHO05D006956 8.4e-112 407.9 344 55.2
Manes.13G039100 Manihot esculenta HOM05D000834 ORTHO05D006956 1.1e-111 407.5 340 56.2
Mapoly0051s0097 Marchantia polymorpha HOM05D000834 ORTHO05D006956 1.1e-111 407.5 361 56.0
Nn1g03003 Nelumbo nucifera HOM05D000834 ORTHO05D006956 1.1e-111 407.5 338 57.4
arahy.Tifrunner.gnm1.ann1.WYWU3M Arachis hypogaea HOM05D000834 ORTHO05D006956 1.4e-111 407.1 340 56.5
MD10G1175400 Malus domestica HOM05D000834 ORTHO05D006956 1.4e-111 407.1 344 56.4
MBI07_g22384_MAGBIO Magnolia biondii HOM05D000834 ORTHO05D006956 1.9e-111 406.8 341 56.0
Lj5g0006902 Lotus japonicus HOM05D000834 ORTHO05D006956 2.4e-111 406.4 344 56.1
arahy.Tifrunner.gnm1.ann1.G250MW Arachis hypogaea HOM05D000834 ORTHO05D006956 3.2e-111 406.0 340 56.5
Ciclev10020464m.g Citrus clementina HOM05D000834 ORTHO05D006956 3.2e-111 406.0 362 56.1
Gohir.D11G140000 Gossypium hirsutum HOM05D000834 ORTHO05D006956 3.2e-111 406.0 340 55.3
HanXRQChr01g0014941 Helianthus annuus HOM05D000834 ORTHO05D006956 3.2e-111 406.0 340 57.1
ClCG06G001380 Citrullus lanatus HOM05D000834 ORTHO05D006956 4.2e-111 405.6 340 56.2
Aqoxy5G00122 Aquilegia oxysepala HOM05D000834 ORTHO05D006956 5.4e-111 405.2 340 55.3
Cfa002491 Carpinus fangiana HOM05D000834 ORTHO05D006956 5.4e-111 405.2 344 56.1
Gorai.007G150200 Gossypium raimondii HOM05D000834 ORTHO05D006956 5.4e-111 405.2 340 55.6
Phvul.007G153700 Phaseolus vulgaris HOM05D000834 ORTHO05D006956 5.4e-111 405.2 340 57.1
Haze_24714 Corylus avellana HOM05D000834 ORTHO05D006956 7.1e-111 404.8 344 55.8
CSS0037788 Camellia sinensis var. sinensis HOM05D000834 ORTHO05D006956 9.3e-111 404.4 340 55.3
CsaV3_6G007320 Cucumis sativus L. HOM05D000834 ORTHO05D006956 9.3e-111 404.4 340 55.9
Lalb_Chr06g0170741 Lupinus albus HOM05D000834 ORTHO05D006956 9.3e-111 404.4 350 56.3
Potri.002G255900 Populus trichocarpa HOM05D000834 ORTHO05D006956 9.3e-111 404.4 340 55.9
CSS0050145 Camellia sinensis var. sinensis HOM05D000834 ORTHO05D006956 1.2e-110 404.1 340 55.3
Sc05g0002850 Simmondsia chinensis HOM05D000834 ORTHO05D006956 1.2e-110 404.1 340 55.6
THA.LOC104814534 Tarenaya hassleriana HOM05D000834 ORTHO05D006956 1.2e-110 404.1 339 56.6
ATR0787G052 Amborella trichopoda HOM05D000834 ORTHO05D006956 2.1e-110 403.3 341 55.4
Lsat_1_v5_gn_5_181100 Lactuca sativa HOM05D000834 ORTHO05D006956 2.1e-110 403.3 340 56.5
Gohir.A11G133900 Gossypium hirsutum HOM05D000834 ORTHO05D006956 2.7e-110 402.9 340 54.7
Atru.chr5.1869 Acer truncatum HOM05D000834 ORTHO05D006956 3.5e-110 402.5 344 55.8
RcHm_v2.0_Chr6g0286481 Rosa chinensis HOM05D000834 ORTHO05D006956 3.5e-110 402.5 344 55.5
VMungo0720G2048 Vigna mungo HOM05D000834 ORTHO05D006956 6.0e-110 401.7 344 55.5
Lj1C74T17 Lonicera japonica HOM05D000834 ORTHO05D006956 1.0e-109 401.0 340 55.6
Sabra02G0194500 Salix brachista HOM05D000834 ORTHO05D006956 1.0e-109 401.0 340 55.3
HPP92_020769 Vanilla planifolia HOM05D000834 ORTHO05D006956 1.0e-109 401.0 347 55.3
TAR362G0351 Trochodendron aralioides HOM05D000834 ORTHO05D006956 1.3e-109 400.6 344 55.2
Actinidia09509 Actinidia chinensis HOM05D000834 ORTHO05D006956 2.3e-109 399.8 340 54.7
CDE09G1390 Ceratophyllum demersum HOM05D000834 ORTHO05D006956 2.3e-109 399.8 340 55.9
Medtr1g069455 Medicago truncatula HOM05D000834 ORTHO05D006956 2.3e-109 399.8 344 55.2
Sed0018887 Sechium edule HOM05D000834 ORTHO05D006956 3.0e-109 399.4 340 56.8
COL.COLO4_02902 Corchorus olitorius HOM05D000834 ORTHO05D006956 3.9e-109 399.1 344 53.5
PSO832G2974 Papaver somniferum HOM05D000834 ORTHO05D006956 3.9e-109 399.1 340 56.2
Manes.12G038400 Manihot esculenta HOM05D000834 ORTHO05D006956 5.1e-109 398.7 340 55.6
Psat6g062480 Pisum sativum HOM05D000834 ORTHO05D006956 5.1e-109 398.7 344 54.7
Duzib138G0050 Durio zibethinus HOM05D000834 ORTHO05D006956 6.6e-109 398.3 344 53.8
PSO764G0197 Papaver somniferum HOM05D000834 ORTHO05D006956 6.6e-109 398.3 340 56.2
Solyc09g064450.3 Solanum lycopersicum HOM05D000834 ORTHO05D006956 6.6e-109 398.3 340 55.0
TPR.G5902 Trifolium pratense HOM05D000834 ORTHO05D006956 6.6e-109 398.3 344 54.7
TWI12G0869 Tripterygium wilfordii HOM05D000834 ORTHO05D006956 6.6e-109 398.3 339 55.2
Sopen09g025590 Solanum pennellii HOM05D000834 ORTHO05D006956 8.7e-109 397.9 340 55.0
AUR62025434 Chenopodium quinoa HOM05D000834 ORTHO05D006956 1.1e-108 397.5 344 55.2
FAN24G3261 Fragaria x ananassa HOM05D000834 ORTHO05D006956 1.5e-108 397.1 340 55.9
Os02g0816800 Oryza sativa ssp. japonica HOM05D000834 ORTHO05D006956 1.5e-108 397.1 339 54.6
THA.LOC104820067 Tarenaya hassleriana HOM05D000834 ORTHO05D006956 1.5e-108 397.1 339 55.8
GSVIVG01028438001 Vitis vinifera HOM05D000834 ORTHO05D006956 1.5e-108 397.1 339 55.2
FvH4_2g20370 Fragaria vesca HOM05D000834 ORTHO05D006956 1.9e-108 396.7 340 55.6
Glyma.13G127400 Glycine max HOM05D000834 ORTHO05D006956 2.5e-108 396.4 344 54.1
Aa31LG8G17350 Aethionema arabicum HOM05D000834 ORTHO05D006956 3.3e-108 396.0 339 55.2
Cc01_g17740 Coffea canephora HOM05D000834 ORTHO05D006956 4.3e-108 395.6 360 52.5
Oeu052085.1 Olea europaea HOM05D000834 ORTHO05D006956 4.3e-108 395.6 344 53.5
BcaB08g34904 Brassica carinata HOM05D000834 ORTHO05D006956 5.6e-108 395.2 339 55.8
FAN15G3585 Fragaria x ananassa HOM05D000834 ORTHO05D006956 5.6e-108 395.2 339 55.5
SGA_v2.0_scaffold1G00665 Striga asiatica HOM05D000121 ORTHO05D000102 7.3e-108 394.8 355 53.5
A09p58940 Brassica napus HOM05D000834 ORTHO05D006956 9.6e-108 394.4 339 55.5
C09p15230 Brassica napus HOM05D000834 ORTHO05D006956 9.6e-108 394.4 339 55.5
BraA09t41279Z Brassica rapa HOM05D000834 ORTHO05D006956 9.6e-108 394.4 339 55.5
MSTRG.18357 Avicennia marina HOM05D000834 ORTHO05D006956 1.3e-107 394.0 344 53.5
A07p00360 Brassica napus HOM05D000834 ORTHO05D000909 1.6e-107 393.7 339 55.2
Peaxi162Scf00043g00251 Petunia axillaris HOM05D000834 ORTHO05D006956 1.6e-107 393.7 340 55.6
BcaC04g22796 Brassica carinata HOM05D000834 ORTHO05D006956 2.1e-107 393.3 339 55.2
A09p12840 Brassica napus HOM05D000834 ORTHO05D006956 2.1e-107 393.3 339 55.2
BolC9t54430H Brassica oleracea HOM05D000834 ORTHO05D006956 2.1e-107 393.3 339 55.2
BcaB07g31592 Brassica carinata HOM05D000834 ORTHO05D006956 2.8e-107 392.9 339 55.2
Sp3g33600 Schrenkiella parvula HOM05D000834 ORTHO05D006956 2.8e-107 392.9 339 55.2
Ah.08g213640 Amaranthus hybridus HOM05D000834 ORTHO05D006956 3.6e-107 392.5 345 56.2
BraA07t27827Z Brassica rapa HOM05D000834 ORTHO05D006956 3.6e-107 392.5 339 55.2
Hund05490 Selenicereus undatus HOM05D000834 ORTHO05D006956 4.8e-107 392.1 340 55.3
DCAR_004694 Daucus carota HOM05D000834 ORTHO05D006956 6.2e-107 391.7 338 55.3
BcaC07g41219 Brassica carinata HOM05D000834 ORTHO05D006956 8.1e-107 391.3 339 55.2
C08p42260 Brassica napus HOM05D000834 ORTHO05D006956 8.1e-107 391.3 339 55.2
BolC8t51785H Brassica oleracea HOM05D000834 ORTHO05D006956 8.1e-107 391.3 339 55.2
Thhalv10002002m.g Eutrema salsugineum HOM05D000834 ORTHO05D006956 1.1e-106 391.0 339 54.9
Carub.0003s3474 Capsella rubella HOM05D000834 ORTHO05D006956 1.4e-106 390.6 339 54.9
BcaC06g36723 Brassica carinata HOM05D000834 ORTHO05D006956 1.8e-106 390.2 339 54.9
BolC7t40517H Brassica oleracea HOM05D000834 ORTHO05D006956 1.8e-106 390.2 339 54.9
C07p00720 Brassica napus HOM05D000834 ORTHO05D006956 2.4e-106 389.8 339 54.9
Pp3c14_9070 Physcomitrium patens HOM05D000834 ORTHO05D006956 3.1e-106 389.4 346 58.4
Thecc.01G249300 Theobroma cacao HOM05D000834 ORTHO05D006956 3.1e-106 389.4 344 53.5
AT2G20360 Arabidopsis thaliana HOM05D000834 ORTHO05D006956 5.3e-106 388.7 339 54.9
AL3G53320 Arabidopsis lyrata HOM05D000834 ORTHO05D006956 9.0e-106 387.9 339 54.6
BraA09t36931Z Brassica rapa HOM05D000834 ORTHO05D006956 1.2e-105 387.5 334 55.4
Rhsim01G0259900 Rhododendron simsii HOM05D000834 ORTHO05D006956 7.6e-105 384.8 364 51.9
CARHR110880 Cardamine hirsuta HOM05D000834 ORTHO05D006956 6.4e-104 381.7 339 53.7
MELO3C022394.2 Cucumis melo HOM05D000834 ORTHO05D006956 6.4e-104 381.7 353 53.0
unitig_22.g6307 Utricularia gibba HOM05D000834 ORTHO05D006956 1.1e-103 380.9 344 54.1
Cpa.g.sc87.39 Carica papaya HOM05D000834 ORTHO05D006956 1.1e-100 370.9 376 48.9
BcaB03g16828 Brassica carinata HOM05D000834 ORTHO05D006956 2.5e-100 369.8 340 53.5
Nitab4.5_0000385g0020 Nicotiana tabacum HOM05D000834 ORTHO05D006956 2.8e-99 366.3 388 47.7
Nitab4.5_0002435g0060 Nicotiana tabacum HOM05D000834 ORTHO05D006956 4.8e-99 365.5 383 48.0
SalBow4G1359 Salvia bowleyana HOM05D000834 ORTHO05D006956 6.4e-96 355.1 442 42.1
CSS0005533 Camellia sinensis var. sinensis HOM05D000834 ORTHO05D006956 5.5e-95 352.1 391 47.6
Ca_09644_v3 Cicer arietinum L. HOM05D000834 ORTHO05D006956 5.5e-95 352.1 361 49.3
SMO119G0351 Selaginella moellendorffii HOM05D000834 ORTHO05D006956 5.5e-95 352.1 334 51.5
FAN27G0744 Fragaria x ananassa HOM05D000834 ORTHO05D006956 6.7e-93 345.1 297 55.6
AUR62008805 Chenopodium quinoa HOM05D000834 ORTHO05D006956 7.4e-92 341.7 311 51.4
vmacro14792 Vaccinium macrocarpon HOM05D000834 ORTHO05D006956 2.4e-90 336.7 492 38.4
Dinv19263 Davidia involucrata HOM05D000834 ORTHO05D006956 5.5e-87 325.5 286 53.1
CDE02G1088 Ceratophyllum demersum HOM05D000834 ORTHO05D006956 3.0e-85 319.7 274 56.6
ECA248G1156 Erigeron canadensis HOM05D000121 ORTHO05D000102 1.1e-84 317.8 260 57.7
CAN.G536.3 Capsicum annuum HOM05D000834 ORTHO05D006956 5.7e-84 315.5 259 57.5
Pp3c1_35920 Physcomitrium patens HOM05D000834 ORTHO05D006956 3.1e-82 309.7 291 55.0
MCO13G055 Micromonas commoda HOM05D000834 ORTHO05D006956 2.2e-80 303.5 340 46.2
Zm00001eb258880 Zea mays HOM05D000834 ORTHO05D006956 1.5e-76 290.8 237 58.6
PRCOL_00005891 Prasinoderma coloniale HOM05D000834 ORTHO05D006956 1.8e-69 267.3 358 42.5
SalBow6G5988 Salvia bowleyana HOM05D000834 ORTHO05D006956 9.1e-66 255.0 227 51.5
Cre10.g434450 Chlamydomonas reinhardtii HOM05D000834 ORTHO05D006956 1.4e-63 247.7 348 40.5
MD15G1374200 Malus domestica HOM05D000834 ORTHO05D006956 2.6e-52 210.3 223 47.5
Actinidia23703 Actinidia chinensis HOM05D000834 ORTHO05D006956 7.0e-50 202.2 178 56.2
SEGI_20632 Sequoiadendron giganteum HOM05D000834 ORTHO05D006956 2.8e-35 153.7 102 72.5
Oeu015439.4 Olea europaea HOM05D000121 ORTHO05D000102 2.9e-32 143.7 246 37.0
Dinv43064 Davidia involucrata HOM05D000834 ORTHO05D006956 5.6e-31 139.4 233 37.3
SHI26743 Sapria himalayana HOM05D000834 ORTHO05D006956 7.3e-31 139.0 189 45.0
Gohir.A13G077301 Gossypium hirsutum HOM05D000834 ORTHO05D006956 7.5e-28 129.0 89 66.3
Gohir.A01G059200 Gossypium hirsutum HOM05D000751 ORTHO05D000889 1.2e-17 95.1 86 50.0
CDE02G0223 Ceratophyllum demersum HOM05D000834 ORTHO05D006956 3.5e-17 93.6 78 51.3
Gohir.A12G044900 Gossypium hirsutum HOM05D000751 ORTHO05D000889 1.0e-16 92.0 84 48.8
vmacro08769 Vaccinium macrocarpon HOM05D000834 ORTHO05D006956 4.3e-15 86.7 130 36.9
vmacro08768 Vaccinium macrocarpon HOM05D000834 ORTHO05D426596 2.9e-11 73.9 80 46.2
SHI26740 Sapria himalayana HOM05D000834 ORTHO05D006956 4.1e-10 70.1 107 34.6
BcaB02g11316 Brassica carinata HOM05D000834 ORTHO05D000693 5.1e-08 63.2 52 59.6
Lsat_1_v5_gn_8_148040 Lactuca sativa HOM05D000834 ORTHO05D006956 1.2e-06 58.5 52 51.9


User provided reference genes

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