Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 4.3e-275 950.7 468 100.0
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 3.0e-199 698.7 493 73.4
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 3.9e-199 698.4 498 74.3
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 2.9e-194 682.2 497 72.2
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 1.9e-193 679.5 546 67.0
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 3.7e-186 655.2 539 65.7
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 4.3e-182 641.7 489 70.3
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 8.4e-178 627.5 483 66.9
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 3.5e-168 595.5 475 66.3
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 6.5e-146 521.5 473 61.3
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 3.2e-145 519.2 473 61.1
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 4.2e-145 518.8 518 56.8
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 2.1e-144 516.5 472 61.2
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 2.1e-144 516.5 472 61.2
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 1.5e-142 510.4 477 60.6
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 1.2e-112 411.0 347 60.2
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 3.0e-111 406.4 263 70.7
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 2.0e-110 403.7 272 68.8
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 7.5e-110 401.7 263 69.6
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 9.8e-110 401.4 265 70.2
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 1.3e-109 401.0 344 59.6
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 3.7e-109 399.4 338 59.2
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 2.4e-108 396.7 299 64.5
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 4.1e-108 396.0 267 68.9
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 4.1e-108 396.0 258 69.4
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 5.4e-108 395.6 257 71.2
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 7.0e-108 395.2 256 71.1
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 1.6e-107 394.0 281 66.2
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 2.7e-107 393.3 302 62.3
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 3.5e-107 392.9 261 68.2
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 5.9e-107 392.1 342 56.7
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 7.7e-107 391.7 265 70.2
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 7.7e-107 391.7 319 62.1
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 1.3e-106 391.0 249 73.1
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 2.2e-106 390.2 276 64.5
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 2.2e-106 390.2 346 56.9
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 2.9e-106 389.8 295 64.1
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 5.0e-106 389.0 339 57.2
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 5.0e-106 389.0 297 62.0
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 8.5e-106 388.3 272 65.8
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 1.1e-105 387.9 265 69.4
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 2.5e-105 386.7 309 62.1
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 3.2e-105 386.3 256 68.0
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 3.2e-105 386.3 297 62.0
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 5.5e-105 385.6 278 66.9
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 5.5e-105 385.6 313 59.1
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 5.5e-105 385.6 371 54.7
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 7.2e-105 385.2 303 63.0
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 9.4e-105 384.8 346 56.6
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 1.6e-104 384.0 255 69.8
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 2.1e-104 383.6 297 62.0
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 8.8e-103 378.3 288 63.2
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 2.0e-102 377.1 276 64.1
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 3.4e-102 376.3 252 69.0
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 4.4e-102 375.9 260 65.8
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 9.8e-102 374.8 309 60.2
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 1.7e-101 374.0 279 63.8
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 2.2e-101 373.6 258 68.6
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 2.2e-101 373.6 254 66.9
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 2.8e-101 373.2 329 59.0
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 8.3e-101 371.7 259 65.6
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 3.1e-100 369.8 272 63.2
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 7.0e-100 368.6 347 53.9
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 7.0e-100 368.6 270 64.1
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 9.1e-100 368.2 371 51.2
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 1.7e-98 364.0 251 67.7
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 1.7e-98 364.0 251 67.3
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 3.8e-98 362.8 260 65.8
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 1.1e-97 361.3 285 62.5
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 1.5e-97 360.9 283 60.4
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 2.1e-96 357.1 258 65.9
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 4.7e-96 355.9 264 64.8
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 1.8e-95 354.0 306 58.8
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 1.5e-94 350.9 251 64.9
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 4.4e-94 349.4 301 56.5
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 3.9e-90 336.3 388 45.4
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 2.1e-88 330.5 303 53.5
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 2.6e-86 323.6 285 55.8
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 3.4e-86 323.2 257 59.9
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 9.5e-81 305.1 257 56.4
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 1.8e-79 300.8 261 54.0
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 2.0e-78 297.4 364 47.5
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 1.9e-76 290.8 330 47.3
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 7.1e-76 288.9 355 46.2
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 1.7e-74 284.3 254 56.7
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 2.8e-72 276.9 247 52.6
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 1.8e-71 274.2 172 72.1
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 2.3e-71 273.9 215 63.7
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 2.2e-69 267.3 182 68.7
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 1.4e-68 264.6 173 71.7
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 3.5e-67 260.0 178 69.7
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 3.3e-57 226.9 174 58.6
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 4.3e-57 226.5 159 66.0
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 3.6e-56 223.4 336 38.1
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 2.4e-55 220.7 167 62.9
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 2.4e-55 220.7 253 48.2
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 4.0e-55 219.9 152 65.1
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 4.4e-54 216.5 202 57.4
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 7.9e-51 205.7 178 56.2
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 1.7e-50 204.5 224 50.4
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 1.3e-45 188.3 242 41.7
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 6.4e-45 186.0 260 41.9
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 2.1e-43 181.0 113 70.8
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 1.2e-38 165.2 91 82.4
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 4.8e-32 143.3 123 57.7
Cfa021866 Carpinus fangiana HOM05D006769 ORTHO05D008522 6.3e-32 142.9 316 35.4
PRCOL_00005345 Prasinoderma coloniale HOM05D006769 ORTHO05D008522 3.1e-31 140.6 304 32.6
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 7.6e-30 136.0 87 65.5
Cpa.g.sc8.79 Carica papaya HOM05D006769 ORTHO05D008522 1.3e-29 135.2 84 67.9
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 1.3e-26 125.2 136 45.6
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 2.1e-19 101.3 84 54.8
SGA_v2.0_scaffold77G25292 Striga asiatica HOM05D006769 ORTHO05D008522 2.7e-19 100.9 86 53.5
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 6.1e-19 99.8 147 40.8
CSS0014368 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 3.3e-17 94.0 142 40.8
Prupe.2G270900 Prunus persica HOM05D006769 ORTHO05D008522 3.3e-09 67.4 60 50.0
Prupe.6G190400 Prunus persica HOM05D006769 ORTHO05D008522 7.4e-09 66.2 53 52.8
Os06g0471100 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 2.6e-06 57.8 122 31.1


User provided reference genes

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