Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 9.8e-84 313.5 172 100.0
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 8.6e-72 273.9 173 89.6
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 6.2e-70 267.7 169 89.9
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 2.3e-69 265.8 170 89.4
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 2.7e-65 252.3 176 83.0
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 1.5e-63 246.5 164 87.8
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 9.6e-63 243.8 177 81.4
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 1.6e-62 243.0 163 84.7
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 4.7e-62 241.5 161 84.5
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 1.8e-61 239.6 163 84.7
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 2.4e-61 239.2 161 83.9
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 1.1e-58 230.3 162 84.6
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 2.5e-55 219.2 165 78.8
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 1.0e-48 197.2 163 73.0
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 8.4e-35 151.0 154 64.9
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 9.3e-34 147.5 145 63.4
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 9.3e-34 147.5 177 53.7
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 4.6e-33 145.2 171 56.1
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 4.6e-33 145.2 172 55.8
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 1.3e-32 143.7 181 55.8
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 1.8e-32 143.3 177 53.1
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 3.0e-32 142.5 173 56.1
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 6.7e-32 141.4 172 53.5
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 1.1e-31 140.6 176 56.2
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 1.9e-31 139.8 130 67.7
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 2.5e-31 139.4 177 54.2
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 3.3e-31 139.0 172 54.7
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 5.7e-31 138.3 129 67.4
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 2.2e-30 136.3 148 60.1
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 2.2e-30 136.3 177 53.7
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 8.2e-30 134.4 179 54.2
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 5.3e-29 131.7 176 52.3
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 5.3e-29 131.7 155 57.4
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 6.9e-29 131.3 146 59.6
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 1.5e-28 130.2 179 53.6
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 2.6e-28 129.4 134 62.7
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 2.6e-28 129.4 143 60.1
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 7.6e-28 127.9 122 69.7
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 7.6e-28 127.9 170 52.9
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 1.7e-27 126.7 170 50.6
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 2.2e-27 126.3 175 53.7
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 8.5e-27 124.4 116 69.8
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 8.5e-27 124.4 135 63.0
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 1.1e-26 124.0 165 52.7
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 1.1e-26 124.0 179 53.6
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 4.2e-26 122.1 165 52.1
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 4.2e-26 122.1 154 55.8
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 5.5e-26 121.7 165 52.1
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 5.5e-26 121.7 143 55.9
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 7.2e-26 121.3 116 69.8
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 7.2e-26 121.3 169 51.5
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 7.2e-26 121.3 175 51.4
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 1.2e-25 120.6 133 57.1
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 1.2e-25 120.6 174 48.9
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 2.7e-25 119.4 175 50.9
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 3.6e-25 119.0 152 53.9
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 6.1e-25 118.2 132 56.1
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 6.1e-25 118.2 173 52.6
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 7.9e-25 117.9 130 60.0
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 1.0e-24 117.5 130 60.0
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 1.0e-24 117.5 119 67.2
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 2.3e-24 116.3 130 60.8
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 5.1e-24 115.2 127 61.4
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 5.1e-24 115.2 145 53.8
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 5.1e-24 115.2 134 59.0
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 6.7e-24 114.8 178 46.6
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 8.7e-24 114.4 143 55.9
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 8.7e-24 114.4 173 47.4
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 8.7e-24 114.4 173 47.4
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 8.7e-24 114.4 173 47.4
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 8.7e-24 114.4 128 57.8
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 1.5e-23 113.6 161 52.2
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 4.3e-23 112.1 125 59.2
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 4.3e-23 112.1 179 48.6
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 7.4e-23 111.3 125 63.2
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 7.4e-23 111.3 136 58.1
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 7.4e-23 111.3 127 59.8
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 1.3e-22 110.5 88 83.0
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 1.3e-22 110.5 151 53.0
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 8.2e-22 107.8 151 49.7
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 8.2e-22 107.8 163 50.3
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 1.1e-21 107.5 151 51.0
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 1.4e-21 107.1 116 62.1
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 3.1e-21 105.9 146 52.7
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 5.3e-21 105.1 179 43.0
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 9.1e-21 104.4 100 69.0
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 1.3e-19 100.5 98 67.3
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 1.7e-19 100.1 98 67.3
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 2.2e-19 99.8 102 71.6
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 2.2e-19 99.8 122 55.7
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 2.2e-19 99.8 124 59.7
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 5.0e-19 98.6 80 78.8
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 6.5e-19 98.2 91 74.7
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 9.4e-18 94.4 142 49.3
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 2.1e-17 93.2 138 50.0
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 3.0e-16 89.4 89 65.2
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 3.3e-15 85.9 94 56.4
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 3.7e-14 82.4 88 58.0
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 4.8e-14 82.0 116 50.9
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 2.4e-13 79.7 70 77.1
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 1.2e-12 77.4 80 67.5
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 1.3e-11 73.9 78 65.4
COL.COLO4_11248 Corchorus olitorius HOM05D007523 ORTHO05D009520 6.1e-09 65.1 97 54.6
AUR62044264 Chenopodium quinoa HOM05D007523 ORTHO05D009520 2.2e-06 56.6 72 72.2


User provided reference genes

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