Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR205590 Cardamine hirsuta HOM05D007846 ORTHO05D012592 4.7e-30 134.0 76 100.0
AT5G07571 Arabidopsis thaliana HOM05D000805 ORTHO05D012592 8.6e-16 86.7 74 70.3
CARHR205580 Cardamine hirsuta HOM05D007846 ORTHO05D012592 8.6e-16 86.7 75 69.3
Thhalv10014500m.g Eutrema salsugineum HOM05D000805 ORTHO05D012592 1.5e-15 85.9 76 64.5
AL6G17870 Arabidopsis lyrata HOM05D007846 ORTHO05D012592 1.9e-15 85.5 76 64.5
CARHR205600 Cardamine hirsuta HOM05D007846 ORTHO05D012592 7.3e-15 83.6 76 65.8
Carub.0006s0654 Capsella rubella HOM05D000805 ORTHO05D012592 9.5e-15 83.2 76 64.5
Thhalv10015579m.g Eutrema salsugineum HOM05D000805 ORTHO05D196068 1.6e-14 82.4 76 60.5
AT5G07560 Arabidopsis thaliana HOM05D007846 ORTHO05D012592 1.8e-13 79.0 76 60.5
Sp6g35300 Schrenkiella parvula HOM05D000805 ORTHO05D012592 2.4e-13 78.6 76 61.8
Carub.0006s0655 Capsella rubella HOM05D000805 ORTHO05D114467 3.4e-12 74.7 68 66.2
A03p03370 Brassica napus HOM05D000805 ORTHO05D012592 7.6e-12 73.6 67 65.7
BolC3t12917H Brassica oleracea HOM05D000805 ORTHO05D012592 2.2e-11 72.0 75 60.0
BraA02t04923Z Brassica rapa HOM05D000805 ORTHO05D012592 3.8e-11 71.2 76 55.3
C02p03190 Brassica napus HOM05D000805 ORTHO05D012592 4.9e-11 70.9 76 53.9
BolC2t06281H Brassica oleracea HOM05D000805 ORTHO05D012592 4.9e-11 70.9 76 53.9
A03p03380 Brassica napus HOM05D000805 ORTHO05D012592 8.4e-11 70.1 75 60.0
C02p03200 Brassica napus HOM05D007846 ORTHO05D012592 8.4e-11 70.1 76 52.6
BolC2t06282H Brassica oleracea HOM05D007846 ORTHO05D012592 8.4e-11 70.1 76 52.6
BraA03t09689Z Brassica rapa HOM05D000805 ORTHO05D012592 8.4e-11 70.1 75 60.0
BraA02t04924Z Brassica rapa HOM05D007846 ORTHO05D012592 4.1e-10 67.8 76 51.3
C03p03820 Brassica napus HOM05D000805 ORTHO05D012592 5.4e-10 67.4 69 62.3
BcaB05g21609 Brassica carinata HOM05D000805 ORTHO05D012592 9.2e-10 66.6 76 52.6
Carub.0006s0653 Capsella rubella HOM05D007846 ORTHO05D000624 1.3e-08 62.8 76 50.0
AL6G17860 Arabidopsis lyrata HOM05D007846 ORTHO05D000624 5.1e-08 60.8 76 48.7
AT5G07550 Arabidopsis thaliana HOM05D007846 ORTHO05D000624 8.7e-08 60.1 76 46.1
Thhalv10015090m.g Eutrema salsugineum HOM05D007846 ORTHO05D000624 8.7e-08 60.1 76 46.1
Thhalv10015089m.g Eutrema salsugineum HOM05D000805 ORTHO05D000624 1.1e-07 59.7 76 46.1
Sp6g35310 Schrenkiella parvula HOM05D007846 ORTHO05D000624 1.9e-07 58.9 76 44.7
CARHR205610 Cardamine hirsuta HOM05D007846 ORTHO05D000624 2.5e-07 58.5 76 43.4
CARHR205620 Cardamine hirsuta HOM05D007846 ORTHO05D010837 4.3e-07 57.8 76 47.4
C03p03800 Brassica napus HOM05D000805 ORTHO05D000624 9.6e-07 56.6 76 46.1
Sp6g35320 Schrenkiella parvula HOM05D000805 ORTHO05D000624 1.6e-06 55.8 76 42.1
BolC3t12915H Brassica oleracea HOM05D000805 ORTHO05D000624 2.1e-06 55.5 76 44.7
BcaB01g06049 Brassica carinata HOM05D007846 ORTHO05D000624 2.8e-06 55.1 75 45.3
BraA03t09687Z Brassica rapa HOM05D000805 ORTHO05D000624 4.7e-06 54.3 76 44.7
Carub.0006s0652 Capsella rubella HOM05D007846 ORTHO05D031404 6.2e-06 53.9 62 43.5
THA.LOC104825056 Tarenaya hassleriana HOM05D000805 ORTHO05D000624 6.2e-06 53.9 75 46.7
Nitab4.5_0009301g0010 Nicotiana tabacum HOM05D000805 ORTHO05D000624 8.1e-06 53.5 63 49.2


User provided reference genes

Program Settings