Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR181890 Cardamine hirsuta HOM05D005397 ORTHO05D006493 5.2e-26 120.2 56 100.0
CARHR181880 Cardamine hirsuta HOM05D005397 ORTHO05D006493 9.2e-23 109.4 56 92.9
AT5G42480 Arabidopsis thaliana HOM05D005397 ORTHO05D006493 3.2e-15 84.3 56 80.4
AL8G18860 Arabidopsis lyrata HOM05D005397 ORTHO05D006493 3.5e-14 80.9 56 76.8
Sp2g06890 Schrenkiella parvula HOM05D005397 ORTHO05D006493 1.1e-12 75.9 59 64.4
SpUn0014_0040 Schrenkiella parvula HOM05D005397 ORTHO05D006493 1.1e-12 75.9 59 64.4
SpUn0090_0020 Schrenkiella parvula HOM05D005397 ORTHO05D006493 1.1e-12 75.9 59 64.4
BcaC02g10766 Brassica carinata HOM05D005397 ORTHO05D006493 9.5e-12 72.8 60 61.7
C04p25360 Brassica napus HOM05D005397 ORTHO05D006493 9.5e-12 72.8 60 61.7
BolC4t24042H Brassica oleracea HOM05D005397 ORTHO05D006493 9.5e-12 72.8 60 61.7
BcaC06g31756 Brassica carinata HOM05D005397 ORTHO05D006493 6.2e-11 70.1 59 61.0
Aa31LG9G12600 Aethionema arabicum HOM05D005397 ORTHO05D006493 1.4e-10 68.9 56 62.5
A06p48310 Brassica napus HOM05D005397 ORTHO05D006493 2.3e-10 68.2 60 61.7
Thhalv10003151m.g Eutrema salsugineum HOM05D005397 ORTHO05D006493 4.0e-10 67.4 56 60.7
Carub.0008s0657 Capsella rubella HOM05D005397 ORTHO05D006493 5.2e-10 67.0 60 58.3
BraA06t27701Z Brassica rapa HOM05D005397 ORTHO05D006493 6.8e-10 66.6 59 61.0
THA.LOC104810654 Tarenaya hassleriana HOM05D005397 ORTHO05D006493 3.5e-06 54.3 57 50.9


User provided reference genes

Program Settings