Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR100300 Cardamine hirsuta HOM05D000214 ORTHO05D013285 4.4e-39 164.1 79 100.0
CARHR129000 Cardamine hirsuta HOM05D000214 ORTHO05D013285 7.1e-29 130.2 80 80.0
CARHR263110 Cardamine hirsuta HOM05D000214 ORTHO05D013285 1.6e-28 129.0 79 75.9
CARHR064670 Cardamine hirsuta HOM05D000214 ORTHO05D013285 2.1e-28 128.6 74 81.1
CARHR096030 Cardamine hirsuta HOM05D000214 ORTHO05D013285 2.1e-28 128.6 80 76.2
CARHR221620 Cardamine hirsuta HOM05D000214 ORTHO05D000131 7.8e-28 126.7 68 89.7
BolC6t36891H Brassica oleracea HOM05D000214 ORTHO05D000131 3.9e-27 124.4 80 75.0
BcaC02g07711 Brassica carinata HOM05D000214 ORTHO05D000131 5.1e-27 124.0 78 74.4
CARHR052510 Cardamine hirsuta HOM05D000214 ORTHO05D000131 2.5e-26 121.7 80 77.5
BcaB03g11600 Brassica carinata HOM05D000214 ORTHO05D000131 3.3e-26 121.3 80 72.5
BolC6t36374H Brassica oleracea HOM05D000214 ORTHO05D027157 1.1e-24 116.3 80 70.0
BolC6t36376H Brassica oleracea HOM05D042146 ORTHO05D027157 1.1e-24 116.3 80 70.0
CARHR032440 Cardamine hirsuta HOM05D000214 ORTHO05D000131 2.4e-24 115.2 70 78.6
BolC3t14123H Brassica oleracea HOM05D000589 ORTHO05D000401 1.2e-23 112.8 78 65.4
CARHR271650 Cardamine hirsuta HOM05D000214 ORTHO05D000131 1.2e-23 112.8 74 70.3
CARHR051840 Cardamine hirsuta HOM05D000214 ORTHO05D000131 2.6e-23 111.7 74 67.6
BolC9t58094H Brassica oleracea HOM05D000214 ORTHO05D000131 3.4e-23 111.3 78 64.1
BolC2t07383H Brassica oleracea HOM05D000026 ORTHO05D027236 4.4e-23 110.9 70 71.4
C02p01710 Brassica napus HOM05D007309 ORTHO05D010099 9.9e-23 109.8 73 64.4
CARHR058310 Cardamine hirsuta HOM05D000214 ORTHO05D013285 2.9e-22 108.2 74 64.9
CARHR150730 Cardamine hirsuta HOM05D000214 ORTHO05D000131 1.9e-21 105.5 68 72.1
BolC6t37666H Brassica oleracea HOM05D000214 ORTHO05D000131 7.1e-21 103.6 76 61.8
BcaB05g21784 Brassica carinata HOM05D000214 ORTHO05D000131 4.6e-20 100.9 75 62.7
C09p19340 Brassica napus HOM05D000214 ORTHO05D028072 5.1e-19 97.4 73 58.9
BcaB04g19150 Brassica carinata HOM05D000214 ORTHO05D000131 1.1e-18 96.3 87 57.5
BolC1t02777H Brassica oleracea HOM05D000214 ORTHO05D000131 1.1e-18 96.3 67 64.2
CARHR060220 Cardamine hirsuta HOM05D000214 ORTHO05D000131 4.3e-18 94.4 68 67.6
Sp5g15613 Schrenkiella parvula HOM05D000214 ORTHO05D000131 3.6e-17 91.3 72 56.9
BolC7t43042H Brassica oleracea HOM05D000214 ORTHO05D000131 5.8e-15 84.0 68 52.9
CARHR099640 Cardamine hirsuta HOM05D000214 ORTHO05D000131 5.8e-15 84.0 48 85.4
CARHR156020 Cardamine hirsuta HOM05D000214 ORTHO05D000131 1.7e-14 82.4 58 63.8
CARHR057030 Cardamine hirsuta HOM05D000214 ORTHO05D000131 8.4e-14 80.1 58 69.0
CARHR216040 Cardamine hirsuta HOM05D000214 ORTHO05D000131 8.4e-14 80.1 50 76.0
BolC4t28446H Brassica oleracea HOM05D036964 ORTHO05D033459 1.1e-13 79.7 51 70.6
BolC6t37380H Brassica oleracea HOM05D000214 ORTHO05D000131 4.2e-13 77.8 61 59.0
BolC2t09138H Brassica oleracea HOM05D000214 ORTHO05D000131 7.1e-13 77.0 54 63.0
BolC3t15909H Brassica oleracea HOM05D000214 ORTHO05D000131 7.1e-13 77.0 51 72.5
BolC4t24671H Brassica oleracea HOM05D000405 ORTHO05D000974 9.3e-13 76.6 54 61.1
BolC8t50968H Brassica oleracea HOM05D000214 ORTHO05D000131 1.0e-11 73.2 76 51.3
BolC3t17509H Brassica oleracea HOM05D001696 ORTHO05D040189 1.5e-10 69.3 46 71.7
BolC6t36645H Brassica oleracea HOM05D000214 ORTHO05D000131 2.5e-10 68.6 76 47.4
BolC3t12646H Brassica oleracea HOM05D000214 ORTHO05D041722 4.3e-10 67.8 73 47.9
BcaB08g35779 Brassica carinata HOM05D000214 ORTHO05D000131 1.3e-09 66.2 61 54.1
BolC3t15958H Brassica oleracea HOM05D000214 ORTHO05D000131 1.3e-09 66.2 73 46.6
A02p33070 Brassica napus HOM05D000214 ORTHO05D000131 1.6e-09 65.9 73 43.8
BcaB08g35561 Brassica carinata HOM05D000214 ORTHO05D000131 1.1e-08 63.2 69 44.9
BcaNung03654 Brassica carinata HOM05D000214 ORTHO05D000131 1.8e-08 62.4 73 49.3
CARHR054390 Cardamine hirsuta HOM05D000214 ORTHO05D000131 3.1e-08 61.6 41 70.7
Sp5g15125 Schrenkiella parvula HOM05D000214 ORTHO05D000131 5.3e-08 60.8 47 59.6
CARHR121710 Cardamine hirsuta HOM05D000214 ORTHO05D000131 6.9e-08 60.5 72 44.4
Medtr1g075047 Medicago truncatula HOM05D000214 ORTHO05D013285 6.9e-08 60.5 73 43.8
CARHR262640 Cardamine hirsuta HOM05D000214 ORTHO05D013285 1.5e-07 59.3 73 42.5
Ah.05g175350 Amaranthus hybridus HOM05D000214 ORTHO05D000131 5.8e-07 57.4 82 42.7
BolC6t39701H Brassica oleracea HOM05D007344 ORTHO05D041415 5.8e-07 57.4 41 61.0
CARHR180980 Cardamine hirsuta HOM05D000214 ORTHO05D000131 5.8e-07 57.4 73 41.1
TPR.G31250 Trifolium pratense HOM05D000214 ORTHO05D013285 7.6e-07 57.0 73 42.5
BolC4t22989H Brassica oleracea HOM05D000214 ORTHO05D000131 9.9e-07 56.6 73 49.3
BcaC05g28208 Brassica carinata HOM05D000214 ORTHO05D000131 2.9e-06 55.1 75 44.0
BolC9t54662H Brassica oleracea HOM05D000589 ORTHO05D024463 3.8e-06 54.7 76 39.5
TPR.G39998 Trifolium pratense HOM05D000214 ORTHO05D000131 6.4e-06 53.9 75 44.0


User provided reference genes

Program Settings