Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR064850 Cardamine hirsuta HOM05D006270 ORTHO05D007755 1.8e-142 509.2 258 100.0
Sp5g27100 Schrenkiella parvula HOM05D006270 ORTHO05D007755 1.2e-120 436.8 258 86.8
Thhalv10019029m.g Eutrema salsugineum HOM05D006270 ORTHO05D007755 1.1e-118 430.3 258 84.9
AT1G72030 Arabidopsis thaliana HOM05D006270 ORTHO05D007755 3.1e-118 428.7 258 84.5
AL2G31660 Arabidopsis lyrata HOM05D006270 ORTHO05D007755 2.0e-117 426.0 259 84.6
C06p35210 Brassica napus HOM05D006270 ORTHO05D007755 3.5e-117 425.2 258 84.5
BcaC08g45741 Brassica carinata HOM05D006270 ORTHO05D007755 5.9e-117 424.5 258 84.1
BolC6t38627H Brassica oleracea HOM05D006270 ORTHO05D007755 5.9e-117 424.5 258 84.1
BraA07t30681Z Brassica rapa HOM05D006270 ORTHO05D007755 7.7e-117 424.1 258 83.7
A07p30450 Brassica napus HOM05D006270 ORTHO05D007755 1.0e-116 423.7 258 83.7
BcaB03g15641 Brassica carinata HOM05D006270 ORTHO05D007755 4.0e-113 411.8 258 82.2
Carub.0002s1881 Capsella rubella HOM05D006270 ORTHO05D007755 2.6e-112 409.1 258 82.6
Aa31LG4G10780 Aethionema arabicum HOM05D006270 ORTHO05D007755 9.2e-102 374.0 262 74.0
THA.LOC104809733 Tarenaya hassleriana HOM05D006270 ORTHO05D007755 1.2e-82 310.5 256 64.5
TAR628G1531 Trochodendron aralioides HOM05D006270 ORTHO05D007755 5.3e-65 251.9 194 64.9
Thecc.03G315400 Theobroma cacao HOM05D006270 ORTHO05D007755 6.9e-65 251.5 192 64.6
Potri.005G054600 Populus trichocarpa HOM05D006270 ORTHO05D007755 3.4e-64 249.2 228 57.9
Manes.08G135800 Manihot esculenta HOM05D006270 ORTHO05D007755 5.8e-64 248.4 240 55.4
QL09p054318 Quercus lobata HOM05D006270 ORTHO05D007755 5.8e-64 248.4 222 59.9
Gohir.D08G172100 Gossypium hirsutum HOM05D006270 ORTHO05D007755 7.6e-64 248.1 197 61.4
Gorai.004G179400 Gossypium raimondii HOM05D006270 ORTHO05D007755 7.6e-64 248.1 197 61.4
QL09p054436 Quercus lobata HOM05D006270 ORTHO05D007755 7.6e-64 248.1 222 59.5
Atru.chr13.2329 Acer truncatum HOM05D006270 ORTHO05D007755 9.9e-64 247.7 195 62.6
Dinv03143 Davidia involucrata HOM05D006270 ORTHO05D007755 9.9e-64 247.7 192 63.5
Glyma.08G240100 Glycine max HOM05D006270 ORTHO05D007755 1.7e-63 246.9 228 58.3
GSVIVG01026015001 Vitis vinifera HOM05D006270 ORTHO05D007755 1.7e-63 246.9 191 63.9
Duzib205G0009 Durio zibethinus HOM05D006270 ORTHO05D007755 3.8e-63 245.7 194 62.9
Gohir.A08G151000 Gossypium hirsutum HOM05D006270 ORTHO05D007755 3.8e-63 245.7 192 61.5
Lj3g0009409 Lotus japonicus HOM05D006270 ORTHO05D007755 8.4e-63 244.6 282 51.1
Ciclev10021647m.g Citrus clementina HOM05D006270 ORTHO05D007755 1.4e-62 243.8 203 61.6
Cc10_g11640 Coffea canephora HOM05D006270 ORTHO05D007755 1.4e-62 243.8 230 55.2
Phvul.011G002300 Phaseolus vulgaris HOM05D006270 ORTHO05D007755 1.4e-62 243.8 198 61.6
RcHm_v2.0_Chr1g0380911 Rosa chinensis HOM05D006270 ORTHO05D007755 3.2e-62 242.7 196 63.3
Glyma.12G002000 Glycine max HOM05D006270 ORTHO05D007755 4.2e-62 242.3 225 56.9
SGA_v2.0_scaffold24G10562 Striga asiatica HOM05D006270 ORTHO05D007755 4.2e-62 242.3 208 60.6
arahy.Tifrunner.gnm1.ann1.WW5SAZ Arachis hypogaea HOM05D006270 ORTHO05D007755 5.5e-62 241.9 234 54.7
FAN06G0691 Fragaria x ananassa HOM05D006270 ORTHO05D007755 5.5e-62 241.9 196 63.3
ECA232G4580 Erigeron canadensis HOM05D006270 ORTHO05D007755 9.3e-62 241.1 193 62.2
FAN06G0861 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.2e-61 240.7 196 62.8
arahy.Tifrunner.gnm1.ann1.3FR1H5 Arachis hypogaea HOM05D006270 ORTHO05D007755 1.6e-61 240.4 234 54.7
FAN10G0687 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.6e-61 240.4 196 62.8
FAN10G3159 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.6e-61 240.4 228 56.1
Migut.C01268 Erythranthe guttata HOM05D006270 ORTHO05D007755 2.1e-61 240.0 240 52.5
VMungo1127G1589 Vigna mungo HOM05D006270 ORTHO05D007755 2.1e-61 240.0 198 62.1
PSO170G6113 Papaver somniferum HOM05D006270 ORTHO05D007755 3.5e-61 239.2 203 61.6
Haze_18335 Corylus avellana HOM05D006270 ORTHO05D007755 6.0e-61 238.4 195 63.6
Eucgr.F02983 Eucalyptus grandis HOM05D006270 ORTHO05D007755 6.0e-61 238.4 196 62.8
PGR102G0747 Punica granatum HOM05D006270 ORTHO05D007755 6.0e-61 238.4 196 63.3
Nitab4.5_0001579g0030 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.0e-60 237.7 227 54.6
FAN01G1506 Fragaria x ananassa HOM05D006270 ORTHO05D007755 2.3e-60 236.5 196 62.2
FAN03G2743 Fragaria x ananassa HOM05D006270 ORTHO05D007755 3.9e-60 235.7 196 62.2
PSO782G5577 Papaver somniferum HOM05D006270 ORTHO05D007755 5.1e-60 235.3 203 61.1
Aqoxy6G00085 Aquilegia oxysepala HOM05D006270 ORTHO05D007755 8.7e-60 234.6 205 59.0
Cfa017859 Carpinus fangiana HOM05D006270 ORTHO05D007755 8.7e-60 234.6 209 59.3
TWI59G0231 Tripterygium wilfordii HOM05D006270 ORTHO05D007755 8.7e-60 234.6 208 58.7
Actinidia23030 Actinidia chinensis HOM05D006270 ORTHO05D007755 1.9e-59 233.4 221 55.2
Nitab4.5_0000167g0160 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.9e-59 233.4 226 54.0
Lalb_Chr01g0000131 Lupinus albus HOM05D006270 ORTHO05D007755 2.5e-59 233.0 230 53.9
Sabra05G0047500 Salix brachista HOM05D006270 ORTHO05D007755 2.5e-59 233.0 237 54.0
PGSC0003DMG400014297 Solanum tuberosum HOM05D006270 ORTHO05D007755 2.5e-59 233.0 226 55.3
Oeu032990.1 Olea europaea HOM05D006270 ORTHO05D007755 3.3e-59 232.6 192 60.9
TPR.G27896 Trifolium pratense HOM05D006270 ORTHO05D007755 3.3e-59 232.6 198 59.1
Sc23g0001640 Simmondsia chinensis HOM05D006270 ORTHO05D007755 4.3e-59 232.3 195 60.0
Peaxi162Scf01013g00026 Petunia axillaris HOM05D006270 ORTHO05D007755 7.4e-59 231.5 211 56.4
Sopen03g004530 Solanum pennellii HOM05D006270 ORTHO05D007755 2.1e-58 229.9 227 54.6
HanXRQChr05g0147941 Helianthus annuus HOM05D006270 ORTHO05D007755 3.7e-58 229.2 191 59.7
Os07g0264800 Oryza sativa ssp. japonica HOM05D006270 ORTHO05D007755 6.2e-58 228.4 194 59.8
Rhsim12G0005700 Rhododendron simsii HOM05D006270 ORTHO05D007755 6.2e-58 228.4 202 57.4
MSTRG.25449 Avicennia marina HOM05D006270 ORTHO05D007755 8.1e-58 228.0 223 55.2
Psat7g147160 Pisum sativum HOM05D006270 ORTHO05D007755 8.1e-58 228.0 207 57.5
AUR62023526 Chenopodium quinoa HOM05D006270 ORTHO05D007755 1.4e-57 227.3 204 56.9
ATR1136G034 Amborella trichopoda HOM05D006270 ORTHO05D007755 1.8e-57 226.9 186 61.3
Solyc03g025710.3 Solanum lycopersicum HOM05D006270 ORTHO05D007755 2.4e-57 226.5 199 57.3
Cpa.g.sc66.22 Carica papaya HOM05D006270 ORTHO05D007755 6.9e-57 224.9 232 49.1
vmacro00974 Vaccinium macrocarpon HOM05D006270 ORTHO05D007755 6.9e-57 224.9 247 49.8
CAN.G307.5 Capsicum annuum HOM05D006270 ORTHO05D007755 2.0e-56 223.4 226 53.1
SalBow7G0089 Salvia bowleyana HOM05D006270 ORTHO05D007755 2.0e-56 223.4 196 56.6
EL10Ac1g00156 Beta vulgaris HOM05D006270 ORTHO05D007755 2.6e-56 223.0 202 57.4
CANSAT21G0664 Cannabis sativa HOM05D006270 ORTHO05D007755 2.6e-56 223.0 272 48.5
DCAR_028408 Daucus carota HOM05D006270 ORTHO05D007755 1.3e-55 220.7 210 56.2
Lsat_1_v5_gn_0_7900 Lactuca sativa HOM05D006270 ORTHO05D007755 1.3e-55 220.7 186 60.2
CsaV3_7G024750 Cucumis sativus L. HOM05D006270 ORTHO05D007755 4.9e-55 218.8 231 53.7
Sed0023542 Sechium edule HOM05D006270 ORTHO05D007755 4.9e-55 218.8 220 54.1
ClCG09G010100 Citrullus lanatus HOM05D006270 ORTHO05D007755 6.5e-55 218.4 229 53.3
COL.COLO4_16875 Corchorus olitorius HOM05D006270 ORTHO05D007755 2.7e-53 213.0 157 64.3
unitig_8.g2905 Utricularia gibba HOM05D006270 ORTHO05D007755 7.9e-53 211.5 194 55.7
Nitab4.5_0000167g0150 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.0e-52 211.1 234 51.3
SEGI_40158 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.1e-51 207.6 204 52.9
Nitab4.5_0001579g0080 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.5e-51 207.2 225 50.7
HPP92_002765 Vanilla planifolia HOM05D006270 ORTHO05D007755 1.9e-51 206.8 192 55.7
Pp3c3_19510 Physcomitrium patens HOM05D006270 ORTHO05D007755 2.1e-50 203.4 208 51.4
Nn5g27482 Nelumbo nucifera HOM05D006270 ORTHO05D007755 8.2e-50 201.4 207 56.5
SMO352G0005 Selaginella moellendorffii HOM05D006270 ORTHO05D007755 1.0e-47 194.5 194 51.5
CiPaw.16G073500 Carya illinoinensis HOM05D006270 ORTHO05D007755 6.5e-47 191.8 247 47.8
CAN.G1280.16 Capsicum annuum HOM05D006270 ORTHO05D007755 5.5e-46 188.7 194 54.1
Ca_19683_v3 Cicer arietinum L. HOM05D006270 ORTHO05D007755 3.5e-45 186.0 145 64.1
Lj7A621T38 Lonicera japonica HOM05D006270 ORTHO05D007755 3.0e-44 183.0 146 61.6
PGSC0003DMG400007305 Solanum tuberosum HOM05D006270 ORTHO05D007755 3.0e-44 183.0 222 46.4
PGSC0003DMG400034528 Solanum tuberosum HOM05D006270 ORTHO05D007755 3.1e-41 172.9 226 42.9
Sopen11g010160 Solanum pennellii HOM05D006270 ORTHO05D007755 5.9e-40 168.7 185 46.5
Mapoly0148s0033 Marchantia polymorpha HOM05D006270 ORTHO05D007755 7.9e-37 158.3 187 44.9
Zm00001eb304740 Zea mays HOM05D006270 ORTHO05D007755 5.3e-33 145.6 127 59.8
BcaC08g45742 Brassica carinata HOM05D006270 ORTHO05D007755 1.0e-31 141.4 109 71.6
Prupe.2G311100 Prunus persica HOM05D006270 ORTHO05D007755 2.2e-31 140.2 127 60.6
FvH4_7g31720 Fragaria vesca HOM05D006270 ORTHO05D007755 1.1e-30 137.9 127 59.1
SEGI_10565 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 5.5e-30 135.6 131 52.7
CSS0031567 Camellia sinensis var. sinensis HOM05D006270 ORTHO05D007755 1.2e-29 134.4 155 52.3
AUR62004580 Chenopodium quinoa HOM05D006270 ORTHO05D007755 1.6e-29 134.0 107 59.8
MBI06_g06704_MAGBIO Magnolia biondii HOM05D006270 ORTHO05D007755 2.3e-28 130.2 144 52.1
MELO3C024085.2 Cucumis melo HOM05D006270 ORTHO05D007755 6.7e-28 128.6 162 50.0
CDE04G3476 Ceratophyllum demersum HOM05D006270 ORTHO05D007755 2.6e-27 126.7 166 42.2
SEGI_32338 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 4.4e-27 125.9 118 53.4
AagrBONN_evm.TU.Sc2ySwM_228.4762 Anthoceros agrestis HOM05D006270 ORTHO05D007755 1.9e-22 110.5 133 45.1
Ah.05g178770 Amaranthus hybridus HOM05D006270 ORTHO05D007755 1.4e-20 104.4 172 39.0
SEGI_00952 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.4e-20 104.4 109 49.5
Solyc11g020000.1 Solanum lycopersicum HOM05D006270 ORTHO05D007755 4.4e-19 99.4 185 33.0
Nitab4.5_0000329g0020 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.3e-18 97.8 126 47.6
Cre06.g269100 Chlamydomonas reinhardtii HOM05D006270 ORTHO05D007755 1.4e-17 94.4 216 33.8
CBR_g50390 Chara braunii HOM05D000019 ORTHO05D000002 3.1e-17 93.2 107 44.9
MD01G1220200 Malus domestica HOM05D006270 ORTHO05D007755 5.3e-17 92.4 69 65.2
GSVIVG01026021001 Vitis vinifera HOM05D000026 ORTHO05D001436 2.9e-15 86.7 65 64.6
SEGI_26224 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 5.0e-15 85.9 95 48.4
GSVIVG01026018001 Vitis vinifera HOM05D006270 ORTHO05D007755 1.4e-09 67.8 46 65.2


User provided reference genes

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