Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR064670 Cardamine hirsuta HOM05D000214 ORTHO05D013285 8.9e-37 156.4 76 100.0
CARHR129000 Cardamine hirsuta HOM05D000214 ORTHO05D013285 4.3e-31 137.5 75 86.7
CARHR096030 Cardamine hirsuta HOM05D000214 ORTHO05D013285 1.8e-29 132.1 74 82.4
BcaC02g07711 Brassica carinata HOM05D000214 ORTHO05D000131 4.0e-29 131.0 74 82.4
CARHR032440 Cardamine hirsuta HOM05D000214 ORTHO05D000131 4.0e-29 131.0 70 90.0
CARHR052510 Cardamine hirsuta HOM05D000214 ORTHO05D000131 5.2e-29 130.6 74 86.5
BolC6t36891H Brassica oleracea HOM05D000214 ORTHO05D000131 6.8e-29 130.2 74 82.4
CARHR100300 Cardamine hirsuta HOM05D000214 ORTHO05D013285 1.5e-28 129.0 74 81.1
CARHR263110 Cardamine hirsuta HOM05D000214 ORTHO05D013285 1.9e-26 122.1 74 77.0
BcaB03g11600 Brassica carinata HOM05D000214 ORTHO05D000131 2.7e-25 118.2 74 73.0
BolC2t07383H Brassica oleracea HOM05D000026 ORTHO05D027236 8.6e-24 113.2 75 70.7
CARHR221620 Cardamine hirsuta HOM05D000214 ORTHO05D000131 3.3e-23 111.3 68 77.9
BolC6t36374H Brassica oleracea HOM05D000214 ORTHO05D027157 1.6e-22 109.0 72 69.4
BolC6t36376H Brassica oleracea HOM05D042146 ORTHO05D027157 1.6e-22 109.0 72 69.4
CARHR271650 Cardamine hirsuta HOM05D000214 ORTHO05D000131 1.6e-22 109.0 74 67.6
BolC3t14123H Brassica oleracea HOM05D000589 ORTHO05D000401 2.8e-22 108.2 72 68.1
CARHR058310 Cardamine hirsuta HOM05D000214 ORTHO05D013285 2.8e-22 108.2 74 64.9
CARHR051840 Cardamine hirsuta HOM05D000214 ORTHO05D000131 4.7e-22 107.5 74 64.9
BolC9t58094H Brassica oleracea HOM05D000214 ORTHO05D000131 6.2e-22 107.1 72 68.1
C02p01710 Brassica napus HOM05D007309 ORTHO05D010099 5.2e-21 104.0 72 61.1
BolC6t37666H Brassica oleracea HOM05D000214 ORTHO05D000131 2.6e-20 101.7 70 64.3
CARHR150730 Cardamine hirsuta HOM05D000214 ORTHO05D000131 2.6e-20 101.7 68 72.1
Sp5g15613 Schrenkiella parvula HOM05D000214 ORTHO05D000131 7.5e-20 100.1 73 63.0
BolC1t02777H Brassica oleracea HOM05D000214 ORTHO05D000131 2.2e-19 98.6 67 68.7
BcaB04g19150 Brassica carinata HOM05D000214 ORTHO05D000131 6.4e-19 97.1 79 58.2
BcaB05g21784 Brassica carinata HOM05D000214 ORTHO05D000131 6.4e-19 97.1 74 63.5
CARHR216040 Cardamine hirsuta HOM05D000214 ORTHO05D000131 6.4e-19 97.1 50 96.0
C09p19340 Brassica napus HOM05D000214 ORTHO05D028072 1.4e-18 95.9 72 59.7
CARHR099640 Cardamine hirsuta HOM05D000214 ORTHO05D000131 7.1e-18 93.6 49 93.9
CARHR060220 Cardamine hirsuta HOM05D000214 ORTHO05D000131 2.7e-17 91.7 68 66.2
BolC4t28446H Brassica oleracea HOM05D036964 ORTHO05D033459 3.9e-16 87.8 51 80.4
CARHR057030 Cardamine hirsuta HOM05D000214 ORTHO05D000131 3.9e-16 87.8 58 75.9
BolC3t15909H Brassica oleracea HOM05D000214 ORTHO05D000131 1.5e-15 85.9 51 82.4
CARHR156020 Cardamine hirsuta HOM05D000214 ORTHO05D000131 3.6e-14 81.3 59 61.0
BolC6t37380H Brassica oleracea HOM05D000214 ORTHO05D000131 1.8e-13 79.0 61 59.0
BolC7t43042H Brassica oleracea HOM05D000214 ORTHO05D000131 4.0e-13 77.8 62 51.6
BolC4t24671H Brassica oleracea HOM05D000405 ORTHO05D000974 8.9e-13 76.6 54 63.0
BolC2t09138H Brassica oleracea HOM05D000214 ORTHO05D000131 9.9e-12 73.2 61 55.7
Sp5g15125 Schrenkiella parvula HOM05D000214 ORTHO05D000131 1.1e-10 69.7 47 70.2
BolC8t50968H Brassica oleracea HOM05D000214 ORTHO05D000131 1.9e-10 68.9 72 51.4
BcaNung03654 Brassica carinata HOM05D000214 ORTHO05D000131 5.4e-10 67.4 72 51.4
BolC3t17509H Brassica oleracea HOM05D001696 ORTHO05D040189 9.2e-10 66.6 46 69.6
BolC6t36645H Brassica oleracea HOM05D000214 ORTHO05D000131 9.2e-10 66.6 72 48.6
A02p33070 Brassica napus HOM05D000214 ORTHO05D000131 1.2e-09 66.2 76 44.7
BolC3t12646H Brassica oleracea HOM05D000214 ORTHO05D041722 1.6e-09 65.9 72 47.2
BolC3t15958H Brassica oleracea HOM05D000214 ORTHO05D000131 2.1e-09 65.5 72 47.2
CARHR054390 Cardamine hirsuta HOM05D000214 ORTHO05D000131 2.1e-09 65.5 41 75.6
BcaB08g35779 Brassica carinata HOM05D000214 ORTHO05D000131 2.7e-09 65.1 61 50.8
BcaB08g35561 Brassica carinata HOM05D000214 ORTHO05D000131 2.3e-08 62.0 69 43.5
BolC6t39701H Brassica oleracea HOM05D007344 ORTHO05D041415 3.0e-08 61.6 41 65.9
BcaC05g28208 Brassica carinata HOM05D000214 ORTHO05D000131 1.1e-07 59.7 72 47.2
BolC4t22989H Brassica oleracea HOM05D000214 ORTHO05D000131 3.3e-07 58.2 72 48.6
Ah.05g175350 Amaranthus hybridus HOM05D000214 ORTHO05D000131 4.3e-07 57.8 79 43.0
CARHR121710 Cardamine hirsuta HOM05D000214 ORTHO05D000131 4.3e-07 57.8 72 43.1
Medtr1g075047 Medicago truncatula HOM05D000214 ORTHO05D013285 7.3e-07 57.0 72 43.1
CARHR262640 Cardamine hirsuta HOM05D000214 ORTHO05D013285 1.6e-06 55.8 72 41.7
BolC7t43743H Brassica oleracea HOM05D000214 ORTHO05D000131 2.1e-06 55.5 75 37.3
CARHR180980 Cardamine hirsuta HOM05D000214 ORTHO05D000131 4.7e-06 54.3 72 40.3


User provided reference genes

Program Settings