Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 2.7e-56 221.9 119 100.0
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 1.4e-52 209.5 119 92.4
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 9.0e-52 206.8 119 91.6
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 1.2e-51 206.5 119 91.6
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 2.0e-51 205.7 119 90.8
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 2.0e-51 205.7 119 90.8
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 2.0e-51 205.7 119 90.8
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 2.0e-51 205.7 119 90.8
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 2.0e-51 205.7 119 90.8
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 2.6e-51 205.3 119 90.8
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 2.9e-50 201.8 117 90.6
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 5.4e-49 197.6 119 89.1
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 7.1e-49 197.2 119 84.9
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 4.8e-45 184.5 119 81.5
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 6.9e-44 180.6 103 90.3
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 8.4e-42 173.7 179 59.2
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 1.4e-41 172.9 113 79.6
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 7.1e-41 170.6 113 77.0
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 1.6e-40 169.5 112 77.7
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 2.1e-40 169.1 113 75.2
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 3.5e-40 168.3 112 75.0
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 4.6e-40 167.9 112 77.7
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 1.3e-39 166.4 113 76.1
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 1.3e-39 166.4 112 75.0
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 3.0e-39 165.2 113 72.6
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 5.1e-39 164.5 113 72.6
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.5e-38 162.9 111 77.5
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 1.5e-38 162.9 112 75.9
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.9e-38 162.5 111 76.6
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 1.9e-38 162.5 113 74.3
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 2.5e-38 162.2 111 73.0
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 3.3e-38 161.8 113 73.5
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 3.3e-38 161.8 110 74.5
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 3.3e-38 161.8 110 75.5
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 5.6e-38 161.0 107 74.8
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 5.6e-38 161.0 112 72.3
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 7.4e-38 160.6 108 73.1
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 7.4e-38 160.6 113 72.6
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 9.6e-38 160.2 110 74.5
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 9.6e-38 160.2 110 74.5
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 1.6e-37 159.5 113 73.5
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 3.7e-37 158.3 110 72.7
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 4.8e-37 157.9 113 71.7
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 4.8e-37 157.9 110 72.7
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 6.2e-37 157.5 110 72.7
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 1.4e-36 156.4 113 69.9
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 1.4e-36 156.4 111 72.1
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 1.8e-36 156.0 111 71.2
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 1.8e-36 156.0 110 72.7
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 2.4e-36 155.6 115 69.6
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 2.4e-36 155.6 113 70.8
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 3.1e-36 155.2 113 70.8
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 3.1e-36 155.2 110 73.6
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 3.1e-36 155.2 110 72.7
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 3.1e-36 155.2 107 75.7
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 4.0e-36 154.8 108 73.1
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 5.3e-36 154.5 111 72.1
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 5.3e-36 154.5 113 70.8
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 9.0e-36 153.7 111 69.4
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 9.0e-36 153.7 113 69.0
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 1.2e-35 153.3 113 67.3
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 1.2e-35 153.3 113 69.0
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 2.0e-35 152.5 113 69.0
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 2.0e-35 152.5 112 70.5
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 2.0e-35 152.5 112 68.8
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 3.4e-35 151.8 111 68.5
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 3.4e-35 151.8 111 71.2
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 7.6e-35 150.6 115 67.8
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 1.0e-34 150.2 111 69.4
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 1.3e-34 149.8 111 70.3
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 1.7e-34 149.4 111 69.4
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 3.8e-34 148.3 111 68.5
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 6.5e-34 147.5 99 77.8
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 1.1e-33 146.7 111 67.6
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 1.1e-33 146.7 104 73.1
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 1.1e-33 146.7 111 68.5
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 1.9e-33 146.0 111 66.7
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 3.2e-33 145.2 107 68.2
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 4.2e-33 144.8 113 68.1
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 7.1e-33 144.1 111 66.7
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 1.2e-32 143.3 116 62.9
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 2.3e-31 139.0 111 64.9
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 3.0e-31 138.7 107 65.4
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 3.9e-31 138.3 113 63.7
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 6.7e-31 137.5 111 67.6
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 3.7e-29 131.7 134 58.2
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 8.2e-29 130.6 118 61.9
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 1.8e-28 129.4 99 68.7
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 4.1e-28 128.3 89 71.9
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 6.9e-28 127.5 79 82.3
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 6.9e-28 127.5 107 60.7
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 1.2e-27 126.7 85 72.9
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 1.2e-27 126.7 79 81.0
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 1.5e-27 126.3 85 72.9
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 2.0e-27 125.9 87 75.9
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 2.0e-27 125.9 83 74.7
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 4.5e-27 124.8 83 77.1
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 1.9e-25 119.4 83 72.3
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 3.2e-25 118.6 85 67.1
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 3.2e-25 118.6 79 75.9
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 4.2e-25 118.2 83 72.3
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 7.2e-25 117.5 84 69.0
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 2.1e-24 115.9 81 74.1
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 6.1e-24 114.4 89 70.8
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 6.1e-24 114.4 84 67.9
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 8.7e-23 110.5 79 72.2
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 6.3e-21 104.4 116 52.6
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 1.8e-20 102.8 70 77.1
BcaC05g27114 Brassica carinata HOM05D007073 ORTHO05D008855 4.5e-19 98.2 114 53.5
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 4.5e-19 98.2 106 54.7
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 1.0e-18 97.1 79 65.8
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 5.5e-17 91.3 64 73.4
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 7.9e-16 87.4 108 52.8
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 2.5e-14 82.4 52 78.8
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.1e-12 77.0 52 73.1
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 1.5e-11 73.2 59 64.4
AagrBONN_evm.TU.Sc2ySwM_344.4448 Anthoceros agrestis HOM05D007073 ORTHO05D008855 2.2e-10 69.3 108 41.7
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 1.4e-09 66.6 60 63.3


User provided reference genes

Program Settings