Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 3.0e-146 521.9 286 100.0
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 1.7e-136 489.6 286 92.7
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 5.5e-132 474.6 289 92.4
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 3.6e-131 471.9 294 91.2
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 1.0e-130 470.3 301 88.4
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 1.1e-127 460.3 287 90.2
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 2.8e-123 445.7 311 83.0
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 2.3e-106 389.4 280 82.9
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 1.2e-105 387.1 280 82.5
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 1.9e-103 379.8 294 75.2
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 3.4e-97 359.0 259 80.7
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 1.3e-85 320.5 292 62.3
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 1.5e-84 317.0 300 62.3
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 2.8e-83 312.8 271 64.6
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 1.8e-82 310.1 278 62.6
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 9.0e-82 307.8 227 69.6
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 1.5e-81 307.0 306 61.1
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 2.0e-81 306.6 288 62.2
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 9.9e-81 304.3 207 75.4
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 1.7e-80 303.5 226 70.8
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 2.2e-80 303.1 286 59.8
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 2.9e-80 302.8 295 61.4
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 6.4e-80 301.6 210 74.8
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 1.4e-79 300.4 272 62.9
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 3.2e-79 299.3 283 60.4
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 4.2e-79 298.9 266 62.0
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 7.1e-79 298.1 199 83.4
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 7.1e-79 298.1 233 67.0
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 7.1e-79 298.1 229 69.0
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 1.6e-78 297.0 283 59.7
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 1.6e-78 297.0 208 75.0
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 1.6e-78 297.0 234 68.4
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 1.3e-77 293.9 257 63.0
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 2.3e-77 293.1 267 62.9
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 2.3e-77 293.1 235 66.4
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 2.3e-77 293.1 208 76.4
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 2.3e-77 293.1 275 59.6
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 3.9e-77 292.4 265 61.5
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 5.1e-77 292.0 287 59.2
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 5.1e-77 292.0 307 56.4
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 8.7e-77 291.2 303 56.1
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 3.3e-76 289.3 293 57.3
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 3.3e-76 289.3 272 59.9
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 3.3e-76 289.3 299 56.5
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 3.3e-76 289.3 307 57.7
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 4.3e-76 288.9 266 59.4
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 5.6e-76 288.5 193 75.6
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 1.3e-75 287.3 293 57.7
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 2.1e-75 286.6 299 55.9
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 2.8e-75 286.2 282 58.5
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 1.1e-74 284.3 300 55.7
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 1.1e-74 284.3 253 62.1
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 2.4e-74 283.1 298 57.0
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 2.4e-74 283.1 261 59.8
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 3.1e-74 282.7 298 56.4
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 5.3e-74 282.0 276 57.6
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 6.9e-74 281.6 254 61.8
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 9.0e-74 281.2 309 56.3
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 9.0e-74 281.2 290 57.2
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 1.2e-73 280.8 254 61.8
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 1.3e-72 277.3 270 63.0
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 2.9e-72 276.2 240 62.5
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 7.1e-71 271.6 233 62.7
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 1.2e-70 270.8 276 57.6
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 3.5e-70 269.2 244 60.2
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 4.6e-70 268.9 262 58.8
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 6.0e-70 268.5 259 58.3
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 7.9e-70 268.1 296 55.7
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 2.3e-69 266.5 295 54.2
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 3.9e-69 265.8 294 54.8
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 5.6e-68 261.9 294 54.8
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 6.2e-67 258.5 287 55.7
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 6.9e-66 255.0 225 63.6
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 1.2e-65 254.2 175 74.3
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 2.6e-65 253.1 187 71.7
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 3.4e-65 252.7 187 71.7
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 2.9e-64 249.6 227 63.9
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 4.2e-63 245.7 237 55.3
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 4.2e-63 245.7 209 59.3
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 2.7e-62 243.0 189 66.1
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.7e-62 243.0 300 52.0
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 1.0e-61 241.1 258 57.0
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 1.3e-61 240.7 223 56.5
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 3.9e-61 239.2 262 53.4
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 5.1e-61 238.8 285 54.0
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 1.1e-60 237.7 312 48.4
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 1.5e-60 237.3 285 53.7
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 5.7e-60 235.3 301 51.8
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 1.3e-59 234.2 206 58.3
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 2.4e-58 229.9 215 60.5
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 3.1e-58 229.6 171 70.2
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 1.2e-57 227.6 291 50.2
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 1.5e-57 227.3 353 45.3
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 2.9e-56 223.0 229 58.1
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 1.3e-53 214.2 309 47.2
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 1.1e-52 211.1 215 56.7
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 1.5e-52 210.7 201 60.7
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 7.4e-52 208.4 231 55.8
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 2.4e-50 203.4 191 61.3
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 5.0e-48 195.7 136 72.1
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 2.5e-47 193.4 116 91.4
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 7.9e-46 188.3 184 57.6
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 2.3e-45 186.8 201 48.3
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 5.7e-44 182.2 211 52.6
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 1.2e-41 174.5 198 52.5
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 1.3e-40 171.0 254 48.0
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 6.1e-38 162.2 143 55.9
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 6.1e-38 162.2 177 49.7
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 1.1e-34 151.4 146 65.8
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 1.8e-34 150.6 184 54.3
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 2.0e-33 147.1 154 54.5
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 2.6e-33 146.7 244 45.1
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 1.1e-31 141.4 239 41.4
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 6.1e-22 109.0 218 35.8
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 2.3e-21 107.1 178 34.3
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 3.0e-21 106.7 134 52.2
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 1.2e-17 94.7 192 33.3
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 2.1e-14 84.0 72 61.1
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 1.2e-12 78.2 83 54.2
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 4.4e-12 76.3 89 52.8
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 1.2e-09 68.2 55 60.0


User provided reference genes

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