Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT80G0278 Cannabis sativa HOM05D000003 ORTHO05D011885 3.6e-213 744.6 363 100.0
CANSAT80G0899 Cannabis sativa HOM05D000003 ORTHO05D000004 5.0e-45 186.0 285 39.3
CANSAT56G2868 Cannabis sativa HOM05D000003 ORTHO05D000004 8.5e-45 185.3 282 38.7
CANSAT11G0304 Cannabis sativa HOM05D000003 ORTHO05D000004 4.7e-43 179.5 283 38.2
CANSAT25G0139 Cannabis sativa HOM05D000128 ORTHO05D000059 2.3e-42 177.2 281 36.3
CANSAT21G1882 Cannabis sativa HOM05D000003 ORTHO05D011885 4.1e-39 166.4 267 36.3
CANSAT01G3187 Cannabis sativa HOM05D000003 ORTHO05D000004 2.0e-38 164.1 285 36.1
CANSAT35G1939 Cannabis sativa HOM05D000003 ORTHO05D011885 6.5e-37 159.1 241 37.8
CANSAT56G1417 Cannabis sativa HOM05D000003 ORTHO05D000004 7.5e-33 145.6 282 33.3
CANSAT56G3864 Cannabis sativa HOM05D000003 ORTHO05D009135 3.7e-32 143.3 300 31.7
CANSAT21G1486 Cannabis sativa HOM05D000003 ORTHO05D000004 2.9e-29 133.7 283 31.1
CANSAT78G2328 Cannabis sativa HOM05D000003 ORTHO05D000004 2.5e-28 130.6 175 34.9
CANSAT25G0012 Cannabis sativa HOM05D000003 ORTHO05D000004 1.2e-27 128.3 295 30.5
CANSAT25G2194 Cannabis sativa HOM05D000003 ORTHO05D000004 8.0e-27 125.6 295 31.9
CANSAT25G3142 Cannabis sativa HOM05D000003 ORTHO05D009135 8.9e-26 122.1 289 30.4
CANSAT56G2982 Cannabis sativa HOM05D000003 ORTHO05D011885 2.4e-23 114.0 314 28.7
CANSAT01G0126 Cannabis sativa HOM05D000003 ORTHO05D000004 1.0e-21 108.6 289 28.4
CANSAT11G0143 Cannabis sativa HOM05D000003 ORTHO05D000004 2.8e-19 100.5 266 27.8
CANSAT25G1998 Cannabis sativa HOM05D000003 ORTHO05D011885 3.6e-19 100.1 293 28.3
CANSAT80G0216 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-18 98.2 291 30.2
CANSAT56G3310 Cannabis sativa HOM05D000003 ORTHO05D000004 4.0e-18 96.7 264 31.1
CANSAT01G2103 Cannabis sativa HOM05D000003 ORTHO05D011885 5.2e-18 96.3 289 26.0
CANSAT80G0017 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-17 94.7 291 27.5
CANSAT64G2831 Cannabis sativa HOM05D000003 ORTHO05D011885 1.4e-15 88.2 282 26.6
CANSAT25G0971 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-15 87.4 295 25.1
CANSAT54G2484 Cannabis sativa HOM05D000003 ORTHO05D000004 3.2e-15 87.0 284 24.3
CANSAT21G0556 Cannabis sativa HOM05D000003 ORTHO05D000004 7.0e-15 85.9 315 25.7
CANSAT25G1650 Cannabis sativa HOM05D000003 ORTHO05D011885 7.0e-15 85.9 289 22.8
CANSAT78G0022 Cannabis sativa HOM05D000003 ORTHO05D000004 2.0e-14 84.3 253 27.3
CANSAT35G0689 Cannabis sativa HOM05D000003 ORTHO05D011885 4.6e-14 83.2 291 25.8
CANSAT01G3060 Cannabis sativa HOM05D000003 ORTHO05D011885 7.8e-14 82.4 274 25.9
QL09p017510 Quercus lobata HOM05D000003 ORTHO05D000004 1.0e-13 82.0 287 26.1
CANSAT21G0743 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-13 81.6 317 25.6
LjContig00408g0023232 Lotus japonicus HOM05D000003 ORTHO05D000004 1.7e-13 81.3 298 25.2
CANSAT21G1868 Cannabis sativa HOM05D000003 ORTHO05D000004 2.3e-13 80.9 304 23.4
CANSAT64G1086 Cannabis sativa HOM05D000003 ORTHO05D011885 3.9e-13 80.1 215 26.5
PSO210G0063 Papaver somniferum HOM05D003407 ORTHO05D001026 8.6e-13 79.0 286 25.9
PSO210G3125 Papaver somniferum HOM05D003407 ORTHO05D001026 4.3e-12 76.6 294 24.1
CANSAT80G1695 Cannabis sativa HOM05D000003 ORTHO05D000004 7.3e-12 75.9 108 30.6
PSO170G2417 Papaver somniferum HOM05D003407 ORTHO05D001026 7.3e-12 75.9 256 26.6
CANSAT11G0650 Cannabis sativa HOM05D000003 ORTHO05D000004 9.5e-12 75.5 291 25.8
PSO478G2166 Papaver somniferum HOM05D000003 ORTHO05D000004 1.2e-11 75.1 255 24.7
CANSAT78G1176 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-11 74.7 245 24.1
CANSAT80G2019 Cannabis sativa HOM05D000003 ORTHO05D011885 2.1e-11 74.3 182 27.5
PSO339G1863 Papaver somniferum HOM05D009877 ORTHO05D001026 2.8e-11 73.9 306 23.5
PSO675G0166 Papaver somniferum HOM05D000003 ORTHO05D000004 2.8e-11 73.9 306 23.2
CANSAT35G0710 Cannabis sativa HOM05D000003 ORTHO05D009135 3.6e-11 73.6 131 31.3
CANSAT80G0435 Cannabis sativa HOM05D000003 ORTHO05D000167 4.7e-11 73.2 285 26.0
PSO210G3029 Papaver somniferum HOM05D003407 ORTHO05D001026 8.0e-11 72.4 297 25.6
CANSAT56G2719 Cannabis sativa HOM05D000003 ORTHO05D011885 1.4e-10 71.6 284 26.8
Nn2g11814 Nelumbo nucifera HOM05D000003 ORTHO05D046789 1.4e-10 71.6 101 38.6
CANSAT11G0641 Cannabis sativa HOM05D000003 ORTHO05D009135 1.8e-10 71.2 301 22.6
CANSAT25G2489 Cannabis sativa HOM05D000003 ORTHO05D000167 1.8e-10 71.2 282 24.8
CANSAT54G1357 Cannabis sativa HOM05D000003 ORTHO05D009135 2.3e-10 70.9 202 29.2
CANSAT80G0717 Cannabis sativa HOM05D000003 ORTHO05D009135 3.1e-10 70.5 297 27.3
CANSAT21G1162 Cannabis sativa HOM05D000003 ORTHO05D011885 4.0e-10 70.1 245 22.4
CANSAT64G0833 Cannabis sativa HOM05D000003 ORTHO05D000004 4.0e-10 70.1 308 20.8
AT4G29090 Arabidopsis thaliana HOM05D000003 ORTHO05D000004 5.2e-10 69.7 292 28.1
Lj1g0015020 Lotus japonicus HOM05D000003 ORTHO05D001406 5.2e-10 69.7 285 23.9
CANSAT25G1150 Cannabis sativa HOM05D000003 ORTHO05D009135 6.8e-10 69.3 240 25.4
CANSAT35G0004 Cannabis sativa HOM05D000003 ORTHO05D009135 6.8e-10 69.3 183 26.8
CANSAT35G1450 Cannabis sativa HOM05D000003 ORTHO05D000004 6.8e-10 69.3 128 26.6
CANSAT80G2799 Cannabis sativa HOM05D000003 ORTHO05D000004 8.9e-10 68.9 111 27.9
PSO675G8709 Papaver somniferum HOM05D000003 ORTHO05D000004 8.9e-10 68.9 295 22.4
CANSAT01G0160 Cannabis sativa HOM05D000003 ORTHO05D011885 1.2e-09 68.6 293 20.5
CANSAT01G0225 Cannabis sativa HOM05D000003 ORTHO05D011885 1.2e-09 68.6 126 36.5
CANSAT54G1259 Cannabis sativa HOM05D000003 ORTHO05D000004 1.2e-09 68.6 289 24.2
CANSAT64G2253 Cannabis sativa HOM05D000003 ORTHO05D000004 2.0e-09 67.8 110 32.7
CANSAT54G1284 Cannabis sativa HOM05D000003 ORTHO05D009135 2.6e-09 67.4 291 25.1
CANSAT80G1246 Cannabis sativa HOM05D000003 ORTHO05D000004 2.6e-09 67.4 151 29.1
BcaB07g31656 Brassica carinata HOM05D000003 ORTHO05D000925 3.4e-09 67.0 240 26.2
CANSAT01G1021 Cannabis sativa HOM05D000003 ORTHO05D000004 4.4e-09 66.6 287 20.2
CANSAT56G3302 Cannabis sativa HOM05D000003 ORTHO05D009135 4.4e-09 66.6 318 27.0
PSO675G1122 Papaver somniferum HOM05D000003 ORTHO05D001026 4.4e-09 66.6 283 22.3
PSO824G0080 Papaver somniferum HOM05D007979 ORTHO05D008897 4.4e-09 66.6 278 23.0
QL93p2025_0060 Quercus lobata HOM05D000003 ORTHO05D000004 4.4e-09 66.6 148 25.7
CANSAT01G2409 Cannabis sativa HOM05D000003 ORTHO05D009135 5.8e-09 66.2 265 21.5
CANSAT78G2242 Cannabis sativa HOM05D000003 ORTHO05D009135 5.8e-09 66.2 119 30.3
CANSAT11G0503 Cannabis sativa HOM05D000003 ORTHO05D000004 7.5e-09 65.9 288 21.9
PSO063G3219 Papaver somniferum HOM05D000003 ORTHO05D000004 7.5e-09 65.9 305 22.6
BraA01t03685Z Brassica rapa HOM05D001239 ORTHO05D000925 9.8e-09 65.5 282 24.5
CANSAT80G0189 Cannabis sativa HOM05D000003 ORTHO05D000167 9.8e-09 65.5 284 22.5
CANSAT80G2325 Cannabis sativa HOM05D000003 ORTHO05D000004 1.7e-08 64.7 137 24.8
PSO832G3105 Papaver somniferum HOM05D000003 ORTHO05D000004 1.7e-08 64.7 293 26.3
QL05p001345 Quercus lobata HOM05D000003 ORTHO05D009135 1.7e-08 64.7 147 29.9
Aqoxy4G00680 Aquilegia oxysepala HOM05D009330 ORTHO05D001026 2.2e-08 64.3 317 24.0
CANSAT56G3372 Cannabis sativa HOM05D000003 ORTHO05D009135 2.2e-08 64.3 295 24.1
PSO017G0119 Papaver somniferum HOM05D000003 ORTHO05D006738 2.2e-08 64.3 116 29.3
CANSAT01G0902 Cannabis sativa HOM05D000003 ORTHO05D000004 2.9e-08 63.9 109 27.5
QL03p072831 Quercus lobata HOM05D000003 ORTHO05D000004 2.9e-08 63.9 135 26.7
AT3G25270 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 3.7e-08 63.5 291 24.4
CANSAT11G1393 Cannabis sativa HOM05D000003 ORTHO05D000004 4.9e-08 63.2 273 22.7
QL03p029989 Quercus lobata HOM05D000003 ORTHO05D000004 4.9e-08 63.2 126 25.4
CANSAT21G1671 Cannabis sativa HOM05D000003 ORTHO05D011885 8.3e-08 62.4 253 26.1
Lj6P43T37 Lonicera japonica HOM05D000003 ORTHO05D000004 1.1e-07 62.0 123 30.1
MD07G1135800 Malus domestica HOM05D000003 ORTHO05D000004 1.1e-07 62.0 79 31.6
PSO063G5365 Papaver somniferum HOM05D000003 ORTHO05D000004 1.1e-07 62.0 288 22.2
PSO782G3833 Papaver somniferum HOM05D000003 ORTHO05D000004 1.1e-07 62.0 293 23.5
CANSAT64G0360 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-07 61.6 284 23.9
CANSAT80G2469 Cannabis sativa HOM05D000003 ORTHO05D009135 1.4e-07 61.6 308 26.0
ECA232G1981 Erigeron canadensis HOM05D000003 ORTHO05D000167 1.4e-07 61.6 93 32.3
PSO384G4399 Papaver somniferum HOM05D000003 ORTHO05D001026 1.4e-07 61.6 318 23.6
PSO832G1876 Papaver somniferum HOM05D007979 ORTHO05D008897 1.4e-07 61.6 277 23.1
CANSAT11G0789 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-07 61.2 106 29.2
PSO339G5610 Papaver somniferum HOM05D000003 ORTHO05D001026 1.9e-07 61.2 316 23.1
Aa31sc380G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.4e-07 60.8 138 29.7
CANSAT25G0817 Cannabis sativa HOM05D000003 ORTHO05D009135 2.4e-07 60.8 290 24.5
CANSAT54G1060 Cannabis sativa HOM05D000003 ORTHO05D011885 2.4e-07 60.8 106 29.2
PSO782G4810 Papaver somniferum HOM05D007919 ORTHO05D006738 2.4e-07 60.8 301 23.3
CANSAT56G2496 Cannabis sativa HOM05D000003 ORTHO05D000004 5.4e-07 59.7 113 25.7
CANSAT56G4287 Cannabis sativa HOM05D000003 ORTHO05D000004 7.0e-07 59.3 306 23.5
FvH4_4g20982 Fragaria vesca HOM05D000003 ORTHO05D006737 9.2e-07 58.9 306 22.5
PSO425G0063 Papaver somniferum HOM05D000003 ORTHO05D001026 9.2e-07 58.9 293 22.2
PSO675G1606 Papaver somniferum HOM05D000003 ORTHO05D001026 1.2e-06 58.5 120 27.5
TAR536G0009 Trochodendron aralioides HOM05D000003 ORTHO05D000004 1.2e-06 58.5 114 28.1
CANSAT64G2179 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-06 58.2 110 33.6
Lj4P801T19 Lonicera japonica HOM05D000003 ORTHO05D000004 1.6e-06 58.2 111 29.7
CANSAT11G0192 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-06 57.8 287 26.5
PSO832G2516 Papaver somniferum HOM05D000003 ORTHO05D001026 2.1e-06 57.8 179 25.7
BcaB07g33890 Brassica carinata HOM05D001239 ORTHO05D000925 2.7e-06 57.4 291 25.1
PSO170G5060 Papaver somniferum HOM05D007979 ORTHO05D008897 2.7e-06 57.4 311 21.9
PSO782G1079 Papaver somniferum HOM05D007919 ORTHO05D006738 2.7e-06 57.4 222 22.5
PSO675G6649 Papaver somniferum HOM05D007979 ORTHO05D008897 3.5e-06 57.0 307 23.8
CANSAT35G0171 Cannabis sativa HOM05D000003 ORTHO05D000004 4.6e-06 56.6 286 23.1
CANSAT64G0228 Cannabis sativa HOM05D000003 ORTHO05D000004 4.6e-06 56.6 209 23.0
Lj4g0023123 Lotus japonicus HOM05D000003 ORTHO05D000004 4.6e-06 56.6 106 30.2
BolC6t35225H Brassica oleracea HOM05D001239 ORTHO05D000925 6.0e-06 56.2 131 29.0
vmacro02127 Vaccinium macrocarpon HOM05D000003 ORTHO05D000004 6.0e-06 56.2 309 25.9
CANSAT78G2118 Cannabis sativa HOM05D000003 ORTHO05D011885 7.8e-06 55.8 181 26.0
AUR62023341 Chenopodium quinoa HOM05D009702 ORTHO05D000004 7.8e-06 55.8 103 28.2
AUR62034238 Chenopodium quinoa HOM05D002177 ORTHO05D002257 7.8e-06 55.8 103 28.2
AUR62034364 Chenopodium quinoa HOM05D009702 ORTHO05D000004 7.8e-06 55.8 103 28.2
AUR62034762 Chenopodium quinoa HOM05D009702 ORTHO05D000004 7.8e-06 55.8 103 28.2
AUR62041689 Chenopodium quinoa HOM05D009702 ORTHO05D000004 7.8e-06 55.8 103 28.2
QL03p024674 Quercus lobata HOM05D000005 ORTHO05D000012 7.8e-06 55.8 131 25.2


User provided reference genes

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