Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT78G1733 Cannabis sativa HOM05D007154 ORTHO05D008945 2.7e-83 312.0 162 100.0
Sed0008143 Sechium edule HOM05D007154 ORTHO05D008945 3.3e-49 198.7 165 67.3
Dinv01916 Davidia involucrata HOM05D007154 ORTHO05D008945 6.3e-48 194.5 163 68.1
Eucgr.G02613 Eucalyptus grandis HOM05D007154 ORTHO05D008945 6.3e-48 194.5 164 67.7
Sabra10G0198000 Salix brachista HOM05D007154 ORTHO05D008945 8.2e-48 194.1 162 68.5
Potri.010G254600 Populus trichocarpa HOM05D007154 ORTHO05D008945 1.4e-47 193.4 162 67.3
TWI53G1167 Tripterygium wilfordii HOM05D007154 ORTHO05D008945 1.4e-47 193.4 162 66.0
Cfa018670 Carpinus fangiana HOM05D007154 ORTHO05D008945 2.0e-46 189.5 165 65.5
Ciclev10016869m.g Citrus clementina HOM05D007154 ORTHO05D008945 2.0e-46 189.5 162 65.4
MELO3C005082.2 Cucumis melo HOM05D007154 ORTHO05D008945 1.7e-45 186.4 164 64.6
ClCG01G007940 Citrullus lanatus HOM05D007154 ORTHO05D008945 6.5e-45 184.5 168 61.3
Thecc.02G152200 Theobroma cacao HOM05D007154 ORTHO05D008945 8.5e-45 184.1 162 64.8
Actinidia04367 Actinidia chinensis HOM05D007154 ORTHO05D008945 2.5e-44 182.6 162 64.8
Glyma.07G039300 Glycine max HOM05D007154 ORTHO05D008945 2.5e-44 182.6 163 63.2
Manes.04G160900 Manihot esculenta HOM05D007154 ORTHO05D008945 2.5e-44 182.6 164 64.6
THA.LOC104800635 Tarenaya hassleriana HOM05D007154 ORTHO05D008945 2.5e-44 182.6 168 64.3
arahy.Tifrunner.gnm1.ann1.408I3G Arachis hypogaea HOM05D007154 ORTHO05D008945 4.2e-44 181.8 125 73.6
Atru.chr11.40 Acer truncatum HOM05D007154 ORTHO05D008945 5.5e-44 181.4 160 63.1
COL.COLO4_33150 Corchorus olitorius HOM05D007154 ORTHO05D008945 5.5e-44 181.4 163 63.2
AL6G34660 Arabidopsis lyrata HOM05D007154 ORTHO05D008945 9.4e-44 180.6 173 63.6
Prupe.1G351600 Prunus persica HOM05D007154 ORTHO05D008945 9.4e-44 180.6 162 64.8
AT5G23395 Arabidopsis thaliana HOM05D007154 ORTHO05D008945 1.2e-43 180.3 165 63.6
MD13G1001100 Malus domestica HOM05D007154 ORTHO05D008945 1.2e-43 180.3 162 64.2
Carub.0006s2118 Capsella rubella HOM05D007154 ORTHO05D008945 2.1e-43 179.5 168 61.3
DCAR_030346 Daucus carota HOM05D007154 ORTHO05D008945 2.1e-43 179.5 165 63.0
GSVIVG01034352001 Vitis vinifera HOM05D007154 ORTHO05D008945 2.1e-43 179.5 138 71.0
RcHm_v2.0_Chr4g0447181 Rosa chinensis HOM05D007154 ORTHO05D008945 2.7e-43 179.1 162 62.3
Lsat_1_v5_gn_9_117140 Lactuca sativa HOM05D007154 ORTHO05D008945 3.6e-43 178.7 127 70.1
arahy.Tifrunner.gnm1.ann1.JHQS48 Arachis hypogaea HOM05D007154 ORTHO05D008945 4.6e-43 178.3 125 72.8
CsaV3_5G021910 Cucumis sativus L. HOM05D007154 ORTHO05D008945 4.6e-43 178.3 168 60.7
Lalb_Chr01g0013651 Lupinus albus HOM05D007154 ORTHO05D008945 1.0e-42 177.2 163 60.1
CSS0036440 Camellia sinensis var. sinensis HOM05D007154 ORTHO05D008945 1.4e-42 176.8 162 60.5
Lj3g0022846 Lotus japonicus HOM05D007154 ORTHO05D008945 2.3e-42 176.0 145 66.2
CAN.G419.16 Capsicum annuum HOM05D007154 ORTHO05D008945 3.9e-42 175.3 169 58.6
Gorai.012G136600 Gossypium raimondii HOM05D007154 ORTHO05D008945 3.9e-42 175.3 160 63.1
QL01p000323 Quercus lobata HOM05D007154 ORTHO05D008945 3.9e-42 175.3 153 64.1
SalBow4G2238 Salvia bowleyana HOM05D007154 ORTHO05D008945 5.1e-42 174.9 157 58.6
Ah.10g037940 Amaranthus hybridus HOM05D007154 ORTHO05D008945 6.7e-42 174.5 160 57.5
Peaxi162Scf00329g00212 Petunia axillaris HOM05D007154 ORTHO05D008945 1.5e-41 173.3 166 56.0
Thhalv10005037m.g Eutrema salsugineum HOM05D007154 ORTHO05D008945 2.5e-41 172.6 168 60.1
Gohir.D04G150000 Gossypium hirsutum HOM05D007154 ORTHO05D008945 3.3e-41 172.2 160 62.5
Oeu019256.1 Olea europaea HOM05D007154 ORTHO05D008945 3.3e-41 172.2 157 59.2
Ca_23384_v3 Cicer arietinum L. HOM05D007154 ORTHO05D008945 4.3e-41 171.8 129 69.8
A06p34370 Brassica napus HOM05D007154 ORTHO05D008945 5.7e-41 171.4 167 60.5
BraA06t26367Z Brassica rapa HOM05D007154 ORTHO05D008945 5.7e-41 171.4 167 60.5
Migut.B01210 Erythranthe guttata HOM05D007154 ORTHO05D008945 5.7e-41 171.4 159 60.4
TAR371G0017 Trochodendron aralioides HOM05D007154 ORTHO05D008945 5.7e-41 171.4 155 61.3
VMungo0331G0746 Vigna mungo HOM05D007154 ORTHO05D008945 7.4e-41 171.0 163 61.3
Gohir.A04G109800 Gossypium hirsutum HOM05D007154 ORTHO05D008945 9.7e-41 170.6 160 60.0
EL10Ac2g04490 Beta vulgaris HOM05D007154 ORTHO05D008945 1.3e-40 170.2 162 59.9
Aa31LG11G2830 Aethionema arabicum HOM05D007154 ORTHO05D008945 4.8e-40 168.3 166 61.4
PGR142G2984 Punica granatum HOM05D007154 ORTHO05D008945 4.8e-40 168.3 132 65.9
CiPaw.16G000700 Carya illinoinensis HOM05D007154 ORTHO05D008945 8.2e-40 167.5 162 61.1
Cc00_g03880 Coffea canephora HOM05D007154 ORTHO05D008945 1.1e-39 167.2 167 56.3
PGSC0003DMG400025308 Solanum tuberosum HOM05D007154 ORTHO05D008945 1.4e-39 166.8 148 59.5
Nitab4.5_0011708g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 2.4e-39 166.0 122 68.0
Nitab4.5_0007445g0030 Nicotiana tabacum HOM05D007154 ORTHO05D008945 3.1e-39 165.6 122 67.2
Sp2g23770 Schrenkiella parvula HOM05D007154 ORTHO05D008945 3.1e-39 165.6 168 58.9
Solyc04g008770.3 Solanum lycopersicum HOM05D007154 ORTHO05D008945 3.1e-39 165.6 147 59.2
Sopen04g003950 Solanum pennellii HOM05D007154 ORTHO05D008945 3.1e-39 165.6 147 59.2
HanXRQChr13g0420721 Helianthus annuus HOM05D007154 ORTHO05D008945 6.9e-39 164.5 123 68.3
C07p44160 Brassica napus HOM05D007154 ORTHO05D008945 9.1e-39 164.1 167 58.7
BolC7t44940H Brassica oleracea HOM05D007154 ORTHO05D008945 9.1e-39 164.1 167 58.7
AUR62023198 Chenopodium quinoa HOM05D007154 ORTHO05D008945 9.1e-39 164.1 145 62.1
Medtr8g020800 Medicago truncatula HOM05D007154 ORTHO05D008945 9.1e-39 164.1 126 67.5
Nitab4.5_0002707g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 1.2e-38 163.7 122 66.4
FAN07G0022 Fragaria x ananassa HOM05D007154 ORTHO05D008945 1.5e-38 163.3 141 65.2
FAN17G3039 Fragaria x ananassa HOM05D007154 ORTHO05D008945 1.5e-38 163.3 162 59.3
Nn3g18537 Nelumbo nucifera HOM05D007154 ORTHO05D008945 1.5e-38 163.3 156 59.0
Phvul.010G129500 Phaseolus vulgaris HOM05D007154 ORTHO05D008945 1.7e-37 159.8 128 66.4
AUR62023245 Chenopodium quinoa HOM05D007154 ORTHO05D008945 2.9e-37 159.1 144 59.7
ECA240G2562 Erigeron canadensis HOM05D007154 ORTHO05D008945 2.9e-37 159.1 162 54.3
Psat4g220160 Pisum sativum HOM05D007154 ORTHO05D008945 5.0e-37 158.3 127 66.9
Sc10g0006590 Simmondsia chinensis HOM05D007154 ORTHO05D008945 6.5e-37 157.9 162 56.8
Lj3C844G3 Lonicera japonica HOM05D007154 ORTHO05D008945 1.4e-36 156.8 118 66.1
PSO063G0981 Papaver somniferum HOM05D007154 ORTHO05D008945 1.4e-36 156.8 143 58.7
PSO782G0712 Papaver somniferum HOM05D007154 ORTHO05D008945 1.4e-36 156.8 143 58.7
vmacro16164 Vaccinium macrocarpon HOM05D007154 ORTHO05D008945 1.9e-36 156.4 138 60.1
TPR.G36620 Trifolium pratense HOM05D007154 ORTHO05D008945 2.5e-36 156.0 157 54.8
FvH4_4g37330 Fragaria vesca HOM05D007154 ORTHO05D008945 3.2e-36 155.6 105 75.2
HPP92_026886 Vanilla planifolia HOM05D007154 ORTHO05D008945 5.5e-36 154.8 130 63.8
ATR0124G040 Amborella trichopoda HOM05D007154 ORTHO05D008945 1.2e-35 153.7 162 54.3
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 4.7e-35 151.8 183 50.8
CDE04G0025 Ceratophyllum demersum HOM05D007154 ORTHO05D008945 1.0e-34 150.6 143 58.7
HPP92_003488 Vanilla planifolia HOM05D007154 ORTHO05D008945 1.4e-34 150.2 156 52.6
SGA_v2.0_scaffold166G38315 Striga asiatica HOM05D007154 ORTHO05D008945 3.0e-34 149.1 144 57.6
Aqoxy3G04335 Aquilegia oxysepala HOM05D007154 ORTHO05D008945 3.9e-34 148.7 153 53.6
Haze_17398 Corylus avellana HOM05D007154 ORTHO05D008945 8.8e-34 147.5 162 57.4
Glyma.16G008100 Glycine max HOM05D007154 ORTHO05D008945 1.1e-33 147.1 88 78.4
Hund16199 Selenicereus undatus HOM05D007154 ORTHO05D008945 5.7e-33 144.8 162 52.5
BcaNung03727 Brassica carinata HOM05D007154 ORTHO05D008945 1.7e-32 143.3 136 58.8
SGA_v2.0_scaffold249G44952 Striga asiatica HOM05D007154 ORTHO05D008945 5.3e-31 138.3 144 55.6
Cpa.g.sc221.16 Carica papaya HOM05D007154 ORTHO05D008945 7.0e-31 137.9 106 64.2
CARHR190110 Cardamine hirsuta HOM05D007154 ORTHO05D008945 1.6e-30 136.7 108 64.8
Zm00001eb427080 Zea mays HOM05D007154 ORTHO05D008945 5.9e-30 134.8 120 55.0
Os04g0527700 Oryza sativa ssp. japonica HOM05D007154 ORTHO05D008945 2.2e-29 132.9 115 56.5
TAR371G0737 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.1e-28 130.6 121 57.0
Zm00001eb076710 Zea mays HOM05D007154 ORTHO05D008945 6.1e-27 124.8 105 54.3
Duzib248G1404 Durio zibethinus HOM05D007154 ORTHO05D008945 1.0e-26 124.0 115 60.9
unitig_61.g26453 Utricularia gibba HOM05D007154 ORTHO05D008945 1.8e-26 123.2 132 53.8
TAR627G0850 Trochodendron aralioides HOM05D007154 ORTHO05D008945 8.2e-24 114.4 112 56.2
SHI21164 Sapria himalayana HOM05D007154 ORTHO05D008945 1.4e-23 113.6 119 52.9
TAR622G0969 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.7e-21 106.7 118 53.4
Oeu037446.1 Olea europaea HOM05D007154 ORTHO05D008945 1.8e-18 96.7 76 61.8
Pp3c11_17450 Physcomitrium patens HOM05D007154 ORTHO05D008945 9.8e-17 90.9 89 47.2
Duzib051G0001 Durio zibethinus HOM05D007154 ORTHO05D008945 2.4e-15 86.3 99 55.6
MCO07G261 Micromonas commoda HOM05D007154 ORTHO05D008945 1.2e-11 73.9 102 40.2
AagrBONN_evm.TU.Sc2ySwM_362.2201 Anthoceros agrestis HOM05D007154 ORTHO05D008945 6.1e-11 71.6 79 44.3
Cfa026739 Carpinus fangiana HOM05D007154 ORTHO05D008945 2.2e-08 63.2 125 33.6
Mapoly0093s0036 Marchantia polymorpha HOM05D007154 ORTHO05D008945 2.2e-08 63.2 103 34.0
SEGI_35140 Sequoiadendron giganteum HOM05D007154 ORTHO05D008945 2.2e-08 63.2 94 37.2


User provided reference genes

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