Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G2566 Cannabis sativa HOM05D006560 ORTHO05D008164 2.6e-303 1044.6 562 100.0
Manes.01G126500 Manihot esculenta HOM05D006560 ORTHO05D008164 1.0e-153 547.7 559 52.8
Prupe.8G267600 Prunus persica HOM05D006560 ORTHO05D008164 2.3e-153 546.6 559 56.5
Potri.015G148300 Populus trichocarpa HOM05D006560 ORTHO05D008164 1.5e-152 543.9 560 54.3
Cfa008016 Carpinus fangiana HOM05D006560 ORTHO05D008164 7.2e-152 541.6 547 58.0
Haze_14043 Corylus avellana HOM05D006560 ORTHO05D008164 3.6e-151 539.3 546 58.4
Atru.chr1.2184 Acer truncatum HOM05D006560 ORTHO05D008164 4.0e-150 535.8 560 53.4
CiPaw.04G006800 Carya illinoinensis HOM05D006560 ORTHO05D008164 4.0e-150 535.8 560 52.7
MD09G1187400 Malus domestica HOM05D006560 ORTHO05D008164 6.4e-148 528.5 559 54.9
Glyma.14G208100 Glycine max HOM05D006560 ORTHO05D008164 3.2e-147 526.2 573 51.0
arahy.Tifrunner.gnm1.ann1.N6ISZX Arachis hypogaea HOM05D006560 ORTHO05D008164 5.4e-147 525.4 567 50.8
arahy.Tifrunner.gnm1.ann1.RNL3QM Arachis hypogaea HOM05D006560 ORTHO05D008164 1.3e-145 520.8 567 50.8
GSVIVG01033201001 Vitis vinifera HOM05D006560 ORTHO05D008164 2.3e-145 520.0 598 52.2
Medtr5g076180 Medicago truncatula HOM05D006560 ORTHO05D008164 3.0e-145 519.6 573 53.2
TPR.G15397 Trifolium pratense HOM05D006560 ORTHO05D008164 6.6e-145 518.5 584 53.1
QL02p055474 Quercus lobata HOM05D006560 ORTHO05D008164 9.5e-144 514.6 534 56.6
TAR629G1839 Trochodendron aralioides HOM05D006560 ORTHO05D008164 6.2e-143 511.9 563 50.6
QL02p056517 Quercus lobata HOM05D006560 ORTHO05D008164 8.0e-143 511.5 708 46.6
Psat2g048560 Pisum sativum HOM05D006560 ORTHO05D008164 1.5e-141 507.3 563 49.6
Actinidia22879 Actinidia chinensis HOM05D006560 ORTHO05D008164 3.4e-141 506.1 577 50.6
Lalb_Chr17g0345771 Lupinus albus HOM05D006560 ORTHO05D008164 5.8e-141 505.4 565 48.5
VMungo0647G2139 Vigna mungo HOM05D006560 ORTHO05D008164 5.8e-141 505.4 564 49.3
Cc07_g12560 Coffea canephora HOM05D006560 ORTHO05D008164 1.3e-140 504.2 568 52.3
RcHm_v2.0_Chr7g0242051 Rosa chinensis HOM05D006560 ORTHO05D008164 1.7e-140 503.8 561 51.2
Ca_05740_v3 Cicer arietinum L. HOM05D006560 ORTHO05D008164 4.1e-139 499.2 560 50.0
LjContig00141g0007295 Lotus japonicus HOM05D006560 ORTHO05D008164 5.4e-139 498.8 566 49.5
Phvul.008G242800 Phaseolus vulgaris HOM05D006560 ORTHO05D008164 2.7e-138 496.5 561 48.5
FvH4_5g39750 Fragaria vesca HOM05D006560 ORTHO05D008164 6.0e-138 495.4 559 51.0
MSTRG.3663 Avicennia marina HOM05D006560 ORTHO05D008164 2.3e-137 493.4 582 48.8
DCAR_014134 Daucus carota HOM05D006560 ORTHO05D008164 1.1e-136 491.1 575 48.2
TWI77G0885 Tripterygium wilfordii HOM05D006560 ORTHO05D008164 2.5e-136 490.0 560 50.7
PGR102G0946 Punica granatum HOM05D006560 ORTHO05D008164 8.9e-134 481.5 569 51.3
Aqoxy3G04298 Aquilegia oxysepala HOM05D006560 ORTHO05D008164 1.5e-133 480.7 562 46.8
Thecc.04G055900 Theobroma cacao HOM05D006560 ORTHO05D008164 2.0e-133 480.3 563 48.8
Sabra16G0321300 Salix brachista HOM05D006560 ORTHO05D008164 1.1e-131 474.6 549 49.4
CAN.G809.82 Capsicum annuum HOM05D006560 ORTHO05D008164 9.2e-131 471.5 582 47.3
Migut.K01188 Erythranthe guttata HOM05D006560 ORTHO05D008164 2.1e-130 470.3 577 47.1
Hma1.2p1_0085F.1_g043920 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 2.1e-130 470.3 547 49.0
Duzib138G1900 Durio zibethinus HOM05D006560 ORTHO05D008164 7.8e-130 468.4 573 46.1
COL.COLO4_13435 Corchorus olitorius HOM05D006560 ORTHO05D008164 1.7e-129 467.2 580 46.6
PSO063G7212 Papaver somniferum HOM05D006560 ORTHO05D008164 1.9e-128 463.8 565 47.6
PSO782G5584 Papaver somniferum HOM05D006560 ORTHO05D008164 2.5e-128 463.4 564 47.0
Eucgr.B03794 Eucalyptus grandis HOM05D006560 ORTHO05D008164 3.3e-128 463.0 578 47.6
CsaV3_3G021130 Cucumis sativus L. HOM05D006560 ORTHO05D008164 9.5e-128 461.5 563 47.6
MELO3C020249.2 Cucumis melo HOM05D006560 ORTHO05D008164 1.6e-127 460.7 562 46.8
Sed0010007 Sechium edule HOM05D006560 ORTHO05D008164 8.1e-127 458.4 562 50.5
ClCG05G011330 Citrullus lanatus HOM05D006560 ORTHO05D008164 1.5e-125 454.1 563 47.2
Gohir.A12G053000 Gossypium hirsutum HOM05D006560 ORTHO05D008164 9.9e-125 451.4 572 46.3
Sabra16G0322200 Salix brachista HOM05D006560 ORTHO05D008164 2.2e-124 450.3 591 46.9
Sp3g01710 Schrenkiella parvula HOM05D006560 ORTHO05D008164 2.2e-124 450.3 568 46.5
Solyc02g081520.3 Solanum lycopersicum HOM05D006560 ORTHO05D008164 5.4e-123 445.7 557 46.9
Gorai.008G054800 Gossypium raimondii HOM05D006560 ORTHO05D008164 7.1e-123 445.3 575 46.4
Sabra15G0156900 Salix brachista HOM05D006560 ORTHO05D008164 7.1e-123 445.3 576 47.2
Gohir.D12G051500 Gossypium hirsutum HOM05D006560 ORTHO05D008164 1.2e-122 444.5 577 46.3
AL3G12070 Arabidopsis lyrata HOM05D006560 ORTHO05D008164 1.0e-121 441.4 566 45.9
Nitab4.5_0000108g0060 Nicotiana tabacum HOM05D006560 ORTHO05D008164 1.0e-121 441.4 564 46.5
SalBow5G2177 Salvia bowleyana HOM05D006560 ORTHO05D008164 3.9e-121 439.5 547 44.4
Hund12951 Selenicereus undatus HOM05D006560 ORTHO05D008164 2.5e-120 436.8 551 46.5
HanXRQChr16g0532681 Helianthus annuus HOM05D006560 ORTHO05D008164 9.6e-120 434.9 566 44.0
CARHR076680 Cardamine hirsuta HOM05D006560 ORTHO05D008164 1.2e-119 434.5 569 43.9
AUR62038458 Chenopodium quinoa HOM05D006560 ORTHO05D008164 1.6e-119 434.1 566 45.9
A05p44410 Brassica napus HOM05D006560 ORTHO05D008164 2.8e-119 433.3 562 45.4
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 3.6e-119 433.0 582 44.7
Aa31LG5G13150 Aethionema arabicum HOM05D006560 ORTHO05D008164 2.6e-117 426.8 611 42.6
Lsat_1_v5_gn_3_69681 Lactuca sativa HOM05D006560 ORTHO05D008164 2.2e-116 423.7 548 43.8
AUR62014236 Chenopodium quinoa HOM05D006560 ORTHO05D008164 1.9e-115 420.6 533 46.5
ECA246G0244 Erigeron canadensis HOM05D006560 ORTHO05D008164 4.2e-115 419.5 578 41.9
Dinv28275 Davidia involucrata HOM05D006560 ORTHO05D008164 3.5e-114 416.4 506 46.8
EL10Ac6g14054 Beta vulgaris HOM05D006560 ORTHO05D008164 3.9e-113 412.9 552 45.8
Lj4A249G52 Lonicera japonica HOM05D006560 ORTHO05D008164 7.3e-112 408.7 495 48.5
Thhalv10020468m.g Eutrema salsugineum HOM05D006560 ORTHO05D008164 1.1e-110 404.8 568 43.3
Carub.0003s0178 Capsella rubella HOM05D006560 ORTHO05D008164 1.8e-110 404.1 562 41.8
AT3G02680 Arabidopsis thaliana HOM05D006560 ORTHO05D008164 1.2e-109 401.4 567 42.2
BcaC05g30516 Brassica carinata HOM05D006560 ORTHO05D008164 5.8e-109 399.1 561 43.0
Sc09g0004640 Simmondsia chinensis HOM05D006560 ORTHO05D008164 7.6e-109 398.7 506 45.7
BraA06t23296Z Brassica rapa HOM05D006560 ORTHO05D008164 2.2e-108 397.1 562 42.7
vmacro20436 Vaccinium macrocarpon HOM05D006560 ORTHO05D008164 2.4e-107 393.7 532 46.1
BolC5t35073H Brassica oleracea HOM05D006560 ORTHO05D008164 4.6e-106 389.4 561 42.1
Rhsim10G0187300 Rhododendron simsii HOM05D006560 ORTHO05D008164 4.6e-106 389.4 653 39.8
Ah.14g086100 Amaranthus hybridus HOM05D006560 ORTHO05D008164 5.1e-105 386.0 571 42.6
PGSC0003DMG400017739 Solanum tuberosum HOM05D006560 ORTHO05D008164 9.0e-102 375.2 582 41.6
Nitab4.5_0003580g0010 Nicotiana tabacum HOM05D006560 ORTHO05D008164 5.8e-101 372.5 521 43.8
C09p75830 Brassica napus HOM05D006560 ORTHO05D008164 6.4e-100 369.0 545 41.5
Glyma.02G239200 Glycine max HOM05D006560 ORTHO05D008164 9.3e-99 365.2 466 44.8
HPP92_015158 Vanilla planifolia HOM05D006560 ORTHO05D008164 4.3e-96 356.3 576 39.2
MBI03_g13822_MAGBIO Magnolia biondii HOM05D006560 ORTHO05D008164 1.3e-95 354.8 508 42.5
Os10g0487300 Oryza sativa ssp. japonica HOM05D006560 ORTHO05D008164 3.8e-92 343.2 569 37.4
ATR0618G008 Amborella trichopoda HOM05D006560 ORTHO05D008164 2.1e-82 310.8 505 39.8
Zm00001eb221260 Zea mays HOM05D006560 ORTHO05D008164 3.6e-82 310.1 569 36.2
BcaC05g30567 Brassica carinata HOM05D006560 ORTHO05D008164 1.1e-78 298.5 334 46.7
Cpa.g.sc108.22 Carica papaya HOM05D006560 ORTHO05D008164 1.4e-78 298.1 413 45.3
Hma1.2p1_0085F.1_g043970 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 3.4e-77 293.5 418 43.3
Migut.L00953 Erythranthe guttata HOM05D006560 ORTHO05D008164 2.1e-74 284.3 443 41.3
SEGI_37812 Sequoiadendron giganteum HOM05D006560 ORTHO05D008164 1.1e-72 278.5 593 33.1
Oeu060825.3 Olea europaea HOM05D006560 ORTHO05D008164 8.2e-71 272.3 503 40.4
Ciclev10012792m.g Citrus clementina HOM05D006560 ORTHO05D008164 7.7e-69 265.8 208 63.9
CDE04G3361 Ceratophyllum demersum HOM05D006560 ORTHO05D008164 8.5e-68 262.3 411 40.6
SHI09016 Sapria himalayana HOM05D006560 ORTHO05D008164 1.9e-67 261.2 367 42.8
Migut.L00936 Erythranthe guttata HOM05D006560 ORTHO05D008164 3.2e-67 260.4 424 40.6
Peaxi162Scf00344g01815 Petunia axillaris HOM05D006560 ORTHO05D008164 4.7e-66 256.5 472 38.1
unitig_748.g7016 Utricularia gibba HOM05D006560 ORTHO05D008164 1.0e-60 238.8 544 33.8
Nn3g18627 Nelumbo nucifera HOM05D006560 ORTHO05D008164 3.2e-59 233.8 192 58.9
CSS0021055 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 1.5e-51 208.4 211 51.7
Sopen02g026150 Solanum pennellii HOM05D006560 ORTHO05D008164 2.5e-51 207.6 361 39.9
Hma1.2p1_0085F.1_g043960 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 3.6e-50 203.8 148 66.2
Hma1.2p1_0085F.1_g043925 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 2.3e-49 201.1 148 65.5
FAN08G2099 Fragaria x ananassa HOM05D006560 ORTHO05D008164 1.5e-43 181.8 137 63.5
Ciclev10013450m.g Citrus clementina HOM05D006560 ORTHO05D008164 5.5e-43 179.9 320 42.8
Migut.L00937 Erythranthe guttata HOM05D006560 ORTHO05D008164 8.0e-42 176.0 119 69.7
SMO169G0207 Selaginella moellendorffii HOM05D006560 ORTHO05D008164 1.2e-40 172.2 589 28.9
CSS0034206 Camellia sinensis var. sinensis HOM05D006560 ORTHO05D008164 2.2e-31 141.4 230 50.9
TPR.G36125 Trifolium pratense HOM05D006560 ORTHO05D008164 1.4e-30 138.7 121 56.2
Migut.L00946 Erythranthe guttata HOM05D006560 ORTHO05D008164 1.6e-26 125.2 159 43.4
Pp3c4_14090 Physcomitrium patens HOM05D006560 ORTHO05D008164 2.8e-26 124.4 616 25.2
Nn3g18626 Nelumbo nucifera HOM05D006560 ORTHO05D008164 5.0e-20 103.6 81 69.1
FAN18G2665 Fragaria x ananassa HOM05D006560 ORTHO05D008164 1.5e-16 92.0 66 66.7
CBR_g29321 Chara braunii HOM05D006560 ORTHO05D008164 1.1e-14 85.9 192 29.2
Migut.L00945 Erythranthe guttata HOM05D006560 ORTHO05D008164 1.1e-14 85.9 51 74.5
Ciclev10013286m.g Citrus clementina HOM05D006560 ORTHO05D008164 2.3e-09 68.2 54 61.1
Cfa006566 Carpinus fangiana HOM05D003924 ORTHO05D043563 2.6e-08 64.7 60 60.0


User provided reference genes

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