Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 2.5e-214 748.4 362 100.0
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 1.3e-189 666.4 359 87.5
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 3.7e-189 664.8 359 87.2
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 1.2e-187 659.8 359 86.9
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 1.5e-187 659.4 360 87.5
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 2.6e-187 658.7 359 86.6
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 2.6e-187 658.7 357 88.5
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 5.8e-187 657.5 357 87.4
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 7.6e-187 657.1 357 86.6
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 7.6e-187 657.1 357 87.4
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 7.6e-187 657.1 357 86.8
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 1.0e-186 656.8 358 86.6
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 1.3e-186 656.4 359 86.6
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 2.2e-186 655.6 359 86.9
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 2.9e-186 655.2 357 86.8
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 2.9e-186 655.2 357 86.8
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 4.9e-186 654.4 359 86.6
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 4.9e-186 654.4 360 86.4
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 4.9e-186 654.4 357 86.6
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 8.4e-186 653.7 357 86.6
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 1.1e-185 653.3 357 87.1
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 3.2e-185 651.7 357 87.4
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 4.2e-185 651.4 357 85.7
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 5.5e-185 651.0 357 86.0
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 1.2e-184 649.8 360 85.6
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 1.2e-184 649.8 359 85.5
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 1.6e-184 649.4 357 86.3
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 1.6e-184 649.4 357 85.2
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 3.5e-184 648.3 357 85.4
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 1.0e-183 646.7 357 84.3
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 1.3e-183 646.4 357 84.6
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 1.8e-183 646.0 359 84.7
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 1.8e-183 646.0 392 79.1
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 2.3e-183 645.6 357 86.8
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 8.7e-183 643.7 357 85.4
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 1.1e-182 643.3 357 84.9
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 2.5e-182 642.1 357 84.9
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 2.5e-182 642.1 357 84.9
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 5.7e-182 641.0 359 84.1
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 7.4e-182 640.6 357 84.6
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 2.8e-181 638.6 359 84.7
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 6.3e-181 637.5 357 83.8
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 8.2e-181 637.1 369 83.2
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 1.8e-180 636.0 358 84.1
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 2.4e-180 635.6 357 84.9
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 3.1e-180 635.2 356 85.1
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 5.3e-180 634.4 356 84.8
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 5.3e-180 634.4 356 84.8
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 5.3e-180 634.4 357 83.2
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.2e-179 633.3 356 84.6
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 1.5e-179 632.9 418 75.4
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 1.5e-179 632.9 357 83.2
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 2.0e-179 632.5 357 82.4
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 3.4e-179 631.7 357 82.1
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 4.5e-179 631.3 362 83.4
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 7.6e-179 630.6 383 79.1
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 7.6e-179 630.6 356 84.6
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 1.3e-178 629.8 357 82.6
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 2.2e-178 629.0 356 84.6
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 1.1e-177 626.7 360 81.1
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 5.5e-177 624.4 357 82.4
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 1.6e-176 622.9 339 86.4
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 2.1e-176 622.5 357 82.9
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 2.1e-176 622.5 357 82.1
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 4.6e-176 621.3 426 72.5
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 5.1e-175 617.8 358 80.7
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 1.1e-174 616.7 357 81.2
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 1.1e-174 616.7 358 81.0
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 1.1e-174 616.7 358 81.0
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 5.7e-174 614.4 355 82.0
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 7.4e-174 614.0 358 80.2
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 2.2e-173 612.5 359 80.2
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 2.8e-173 612.1 361 79.5
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 8.2e-173 610.5 358 80.2
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 8.2e-173 610.5 402 74.1
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 3.1e-172 608.6 358 79.6
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 3.1e-172 608.6 358 79.6
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 3.1e-172 608.6 358 79.6
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 4.1e-172 608.2 358 79.3
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 5.3e-172 607.8 362 78.5
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 1.5e-171 606.3 358 79.1
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 2.0e-171 605.9 357 79.6
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 2.2e-170 602.4 386 74.6
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 6.5e-170 600.9 362 77.6
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 9.4e-169 597.0 362 78.2
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 7.9e-168 594.0 356 80.1
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 1.0e-167 593.6 358 78.5
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 1.4e-167 593.2 358 78.5
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 6.7e-167 590.9 358 78.2
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 2.0e-166 589.3 358 77.9
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 9.7e-166 587.0 360 78.3
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 1.3e-165 586.6 366 74.3
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 2.4e-164 582.4 366 72.4
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 7.7e-163 577.4 315 88.6
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 7.9e-160 567.4 357 74.8
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 2.6e-155 552.4 357 74.8
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 6.5e-154 547.7 335 77.6
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 1.4e-151 540.0 302 85.8
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 1.5e-150 536.6 306 85.9
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 5.7e-150 534.6 315 81.6
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 1.7e-146 523.1 358 70.1
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 2.3e-143 512.7 403 65.0
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 2.0e-142 509.6 357 68.3
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 1.8e-140 503.1 358 67.3
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 1.2e-139 500.4 348 72.4
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 3.0e-135 485.7 358 66.2
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 3.0e-127 459.1 368 61.4
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 8.9e-127 457.6 248 87.9
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 8.9e-127 457.6 357 65.8
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 7.5e-126 454.5 243 90.9
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 1.7e-125 453.4 372 63.7
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 7.3e-113 411.4 242 82.2
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 3.6e-104 382.5 211 83.9
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 3.8e-101 372.5 204 87.7
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 9.6e-73 278.1 164 83.5
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 5.1e-66 255.8 152 74.3
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 1.9e-60 237.3 154 70.8
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 1.5e-54 217.6 126 81.0
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 6.5e-53 212.2 119 76.5
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 8.5e-45 185.3 141 65.2
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 7.2e-44 182.2 203 51.7
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 3.8e-37 159.8 98 81.6
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 9.7e-33 145.2 117 65.0
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 4.8e-24 116.3 55 92.7
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 1.6e-22 111.3 107 55.1
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 6.8e-18 95.9 79 64.6
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 1.4e-15 88.2 51 74.5
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 9.2e-15 85.5 39 92.3
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 4.5e-14 83.2 162 37.0
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 1.3e-08 65.1 248 27.8


User provided reference genes

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