Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 6.6e-111 404.1 205 100.0
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 2.1e-56 223.0 210 59.0
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 7.9e-56 221.1 202 59.9
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 1.3e-55 220.3 208 59.1
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 3.9e-55 218.8 213 60.1
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 3.9e-55 218.8 211 60.7
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 1.1e-54 217.2 211 59.2
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 1.5e-54 216.9 194 60.3
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 1.8e-52 209.9 214 59.3
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 3.1e-52 209.1 214 57.9
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 3.1e-52 209.1 210 57.6
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 2.6e-51 206.1 168 63.1
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 1.0e-50 204.1 227 53.7
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 1.3e-50 203.8 203 54.2
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 2.2e-50 203.0 217 58.1
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 5.0e-50 201.8 221 57.0
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 8.5e-50 201.1 214 55.1
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 5.5e-49 198.4 209 55.5
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 5.5e-49 198.4 133 75.9
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 1.2e-48 197.2 148 70.3
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 2.1e-48 196.4 209 55.5
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 2.7e-48 196.1 150 65.3
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 3.6e-48 195.7 202 53.0
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 6.1e-48 194.9 214 51.4
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 1.4e-47 193.7 210 54.8
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 1.8e-47 193.4 199 51.3
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 1.8e-47 193.4 148 67.6
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 1.8e-47 193.4 211 52.6
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 2.3e-47 193.0 205 57.1
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 2.3e-47 193.0 211 53.6
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 2.3e-47 193.0 189 56.1
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 3.0e-47 192.6 194 54.1
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 3.0e-47 192.6 214 53.7
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 3.9e-47 192.2 135 74.1
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 5.1e-47 191.8 166 61.4
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 5.1e-47 191.8 209 52.2
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 5.1e-47 191.8 197 54.3
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 6.7e-47 191.4 207 53.1
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 8.8e-47 191.0 121 80.2
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 8.8e-47 191.0 215 52.1
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 1.1e-46 190.7 148 68.2
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 1.1e-46 190.7 152 65.8
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 1.1e-46 190.7 209 53.1
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 1.5e-46 190.3 160 63.1
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 1.5e-46 190.3 197 57.4
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 2.0e-46 189.9 215 53.5
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 2.6e-46 189.5 130 77.7
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 2.6e-46 189.5 119 80.7
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 9.7e-46 187.6 154 64.9
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 1.3e-45 187.2 152 66.4
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 2.2e-45 186.4 139 69.1
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 2.2e-45 186.4 208 53.4
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 2.8e-45 186.0 146 65.1
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 2.8e-45 186.0 119 79.8
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 3.7e-45 185.7 185 54.6
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 3.7e-45 185.7 126 74.6
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 6.3e-45 184.9 214 53.7
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 8.2e-45 184.5 196 52.6
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 8.2e-45 184.5 102 90.2
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 1.1e-44 184.1 128 73.4
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 1.4e-44 183.7 100 88.0
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 2.4e-44 183.0 131 67.9
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 2.4e-44 183.0 131 67.9
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 3.1e-44 182.6 115 80.9
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 4.1e-44 182.2 127 74.8
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 4.1e-44 182.2 127 74.8
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 5.3e-44 181.8 106 83.0
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 5.3e-44 181.8 120 75.0
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 5.3e-44 181.8 104 85.6
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 6.9e-44 181.4 196 52.6
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 9.1e-44 181.0 108 82.4
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 9.1e-44 181.0 104 88.5
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 1.5e-43 180.3 104 84.6
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 3.4e-43 179.1 103 83.5
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 3.4e-43 179.1 116 76.7
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 4.5e-43 178.7 118 78.8
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 5.9e-43 178.3 202 53.0
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 5.9e-43 178.3 100 88.0
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 1.0e-42 177.6 118 78.8
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 1.0e-42 177.6 118 78.8
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 1.0e-42 177.6 118 78.8
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 1.0e-42 177.6 118 78.8
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 1.3e-42 177.2 121 76.9
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 1.3e-42 177.2 126 72.2
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 1.7e-42 176.8 118 78.0
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 1.7e-42 176.8 156 60.9
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 1.7e-42 176.8 117 77.8
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 1.7e-42 176.8 110 80.9
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 2.2e-42 176.4 103 85.4
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 3.8e-42 175.6 118 78.0
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 5.0e-42 175.3 103 84.5
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 8.5e-42 174.5 110 80.0
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 1.1e-41 174.1 103 81.6
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 1.9e-41 173.3 102 83.3
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 4.2e-41 172.2 103 82.5
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 5.5e-41 171.8 117 75.2
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 1.6e-40 170.2 104 76.9
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 1.6e-40 170.2 104 76.9
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 3.6e-40 169.1 104 77.9
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 2.3e-39 166.4 114 74.6
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 2.3e-39 166.4 111 72.1
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 1.6e-35 153.7 137 56.9
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 4.5e-35 152.1 114 68.4
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 2.5e-33 146.4 108 65.7
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 7.2e-33 144.8 127 58.3
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 1.3e-29 134.0 80 80.0
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 6.3e-29 131.7 98 63.3
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 2.4e-28 129.8 74 85.1
unitig_21.g20451 Utricularia gibba HOM05D006938 ORTHO05D008600 4.5e-27 125.6 70 84.3
Peaxi162Scf00818g00021 Petunia axillaris HOM05D006938 ORTHO05D008600 1.0e-23 114.4 63 85.7
Cre01.g052400 Chlamydomonas reinhardtii HOM05D006938 ORTHO05D008600 1.4e-20 104.0 93 53.8
CDE06G1837 Ceratophyllum demersum HOM05D006938 ORTHO05D008600 2.9e-18 96.3 55 81.8
PRCOL_00002779 Prasinoderma coloniale HOM05D006938 ORTHO05D008600 3.6e-16 89.4 77 55.8
CsaV3_4G025230 Cucumis sativus L. HOM05D006938 ORTHO05D008600 6.1e-16 88.6 62 71.0
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 1.8e-15 87.0 44 90.9
Sc10g0007050 Simmondsia chinensis HOM05D006938 ORTHO05D008600 3.1e-12 76.3 76 52.6
Migut.I00066 Erythranthe guttata HOM05D006938 ORTHO05D008600 5.0e-10 68.9 44 68.2
PRCOL_00004130 Prasinoderma coloniale HOM05D003967 ORTHO05D004531 4.4e-06 55.8 93 34.4
AUR62008132 Chenopodium quinoa HOM05D003967 ORTHO05D004531 5.7e-06 55.5 83 33.7
AUR62028714 Chenopodium quinoa HOM05D003967 ORTHO05D004531 7.5e-06 55.1 83 33.7


User provided reference genes

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