Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 9.5e-62 240.0 118 100.0
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 2.9e-42 175.3 114 74.6
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 2.4e-41 172.2 114 71.9
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 7.1e-41 170.6 113 70.8
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 9.2e-41 170.2 113 73.5
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 1.2e-40 169.9 113 72.6
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 2.1e-40 169.1 113 71.7
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 2.7e-40 168.7 114 71.9
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 3.5e-40 168.3 114 68.4
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 1.0e-39 166.8 113 72.6
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 1.7e-39 166.0 113 69.0
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 1.7e-39 166.0 113 69.0
CANSAT56G0563 Cannabis sativa HOM05D005739 ORTHO05D113818 3.9e-39 164.9 110 82.7
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 3.9e-39 164.9 114 69.3
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 3.9e-39 164.9 114 71.1
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 5.1e-39 164.5 113 71.7
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 8.6e-39 163.7 114 69.3
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 2.5e-38 162.2 113 67.3
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 2.5e-38 162.2 113 67.3
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 3.3e-38 161.8 113 69.9
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 3.3e-38 161.8 114 68.4
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 3.3e-38 161.8 113 66.4
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 4.3e-38 161.4 111 67.6
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 1.2e-37 159.8 113 69.0
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 1.2e-37 159.8 113 67.3
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 1.6e-37 159.5 113 66.4
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 2.8e-37 158.7 113 65.5
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 3.6e-37 158.3 114 66.7
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 3.6e-37 158.3 113 67.3
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 4.7e-37 157.9 114 66.7
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 4.7e-37 157.9 112 66.1
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 6.2e-37 157.5 111 67.6
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 6.2e-37 157.5 113 66.4
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 8.1e-37 157.1 112 69.6
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 8.1e-37 157.1 113 66.4
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 8.1e-37 157.1 114 66.7
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 1.1e-36 156.8 112 65.2
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 1.1e-36 156.8 112 66.1
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 1.1e-36 156.8 113 65.5
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 1.8e-36 156.0 110 65.5
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 1.8e-36 156.0 114 66.7
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 2.3e-36 155.6 113 66.4
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 2.3e-36 155.6 113 66.4
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 2.3e-36 155.6 113 65.5
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 3.1e-36 155.2 111 65.8
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 3.1e-36 155.2 113 64.6
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 5.2e-36 154.5 110 64.5
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 5.2e-36 154.5 113 64.6
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 5.2e-36 154.5 112 65.2
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 8.9e-36 153.7 113 65.5
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 1.5e-35 152.9 113 65.5
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 2.6e-35 152.1 113 61.9
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 3.4e-35 151.8 113 62.8
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 5.8e-35 151.0 112 65.2
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 5.8e-35 151.0 111 64.0
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 5.8e-35 151.0 129 60.5
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 7.6e-35 150.6 114 64.0
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 7.6e-35 150.6 109 65.1
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 9.9e-35 150.2 113 62.8
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 9.9e-35 150.2 114 63.2
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 9.9e-35 150.2 129 58.9
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.7e-34 149.4 113 63.7
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 1.7e-34 149.4 113 61.1
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 1.7e-34 149.4 103 68.9
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 2.2e-34 149.1 113 64.6
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 2.9e-34 148.7 111 62.2
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 8.4e-34 147.1 112 64.3
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 8.4e-34 147.1 109 63.3
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 1.9e-33 146.0 115 60.9
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 1.9e-33 146.0 113 60.2
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 2.4e-33 145.6 112 62.5
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 2.1e-32 142.5 112 58.0
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 2.7e-32 142.1 113 58.4
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 3.5e-32 141.7 109 62.4
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 6.0e-32 141.0 108 61.1
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 7.8e-32 140.6 110 60.9
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 1.0e-31 140.2 113 57.5
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 2.3e-31 139.0 111 58.6
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 3.0e-31 138.7 93 69.9
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 3.0e-31 138.7 108 60.2
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 3.0e-31 138.7 117 58.1
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 8.6e-31 137.1 108 58.3
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 8.6e-31 137.1 108 58.3
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 8.6e-31 137.1 108 58.3
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 8.6e-31 137.1 108 58.3
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 1.1e-30 136.7 108 61.1
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 1.1e-30 136.7 115 61.7
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 1.9e-30 136.0 109 58.7
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 3.3e-30 135.2 108 58.3
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 4.3e-30 134.8 113 57.5
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 5.6e-30 134.4 147 50.3
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 9.6e-30 133.7 108 59.3
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 9.6e-30 133.7 93 65.6
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 1.2e-29 133.3 115 60.9
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 2.8e-29 132.1 108 60.2
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 1.8e-28 129.4 113 53.1
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 8.9e-28 127.1 120 51.7
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 1.9e-25 119.4 119 51.3
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 9.3e-25 117.1 78 74.4
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 3.5e-24 115.2 96 55.2
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 3.0e-23 112.1 108 50.9
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 3.9e-23 111.7 114 53.5
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 1.5e-22 109.8 112 45.5
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 1.9e-22 109.4 103 48.5
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 1.3e-21 106.7 109 48.6
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 3.6e-21 105.1 74 63.5
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 3.4e-19 98.6 104 49.0
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 4.5e-19 98.2 148 40.5
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 1.9e-17 92.8 112 48.2
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 2.4e-17 92.4 137 38.7
RcHm_v2.0_Chr5g0051251 Rosa chinensis HOM05D005739 ORTHO05D033954 2.1e-16 89.4 69 60.9
SEGI_28449 Sequoiadendron giganteum HOM05D005739 ORTHO05D033954 3.9e-15 85.1 70 62.9
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 2.5e-14 82.4 63 65.1
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 1.9e-09 66.2 80 46.2
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 9.3e-09 63.9 38 73.7
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 3.5e-08 62.0 37 70.3
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 3.5e-08 62.0 101 33.7
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 7.4e-06 54.3 113 31.9


User provided reference genes

Program Settings