Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G2723 Cannabis sativa HOM05D007070 ORTHO05D008892 1.9e-102 375.9 200 100.0
MD13G1074900 Malus domestica HOM05D007070 ORTHO05D008892 1.6e-64 250.0 175 76.0
Sed0007814 Sechium edule HOM05D007070 ORTHO05D008892 2.9e-63 245.7 169 74.6
Gohir.A13G072600 Gossypium hirsutum HOM05D007070 ORTHO05D008892 5.0e-63 245.0 172 73.3
Atru.chr11.1834 Acer truncatum HOM05D007070 ORTHO05D008892 6.5e-63 244.6 178 72.5
SGA_v2.0_scaffold302G47841 Striga asiatica HOM05D007070 ORTHO05D008892 6.5e-63 244.6 173 71.1
Nitab4.5_0000141g0310 Nicotiana tabacum HOM05D007070 ORTHO05D008892 8.5e-63 244.2 159 74.8
Nitab4.5_0012600g0010 Nicotiana tabacum HOM05D007070 ORTHO05D008892 8.5e-63 244.2 159 74.8
Cpa.g.sc183.28 Carica papaya HOM05D007070 ORTHO05D008892 1.9e-62 243.0 206 64.6
COL.COLO4_22972 Corchorus olitorius HOM05D007070 ORTHO05D008892 1.9e-62 243.0 180 70.6
CiPaw.05G138000 Carya illinoinensis HOM05D007070 ORTHO05D008892 2.5e-62 242.7 207 65.2
CsaV3_5G032500 Cucumis sativus L. HOM05D007070 ORTHO05D008892 2.5e-62 242.7 167 73.1
Duzib251G0126 Durio zibethinus HOM05D007070 ORTHO05D008892 3.2e-62 242.3 211 64.9
MELO3C012078.2 Cucumis melo HOM05D007070 ORTHO05D008892 4.2e-62 241.9 167 73.1
Gorai.013G083500 Gossypium raimondii HOM05D007070 ORTHO05D008892 7.2e-62 241.1 172 72.7
Duzib268G0688 Durio zibethinus HOM05D007070 ORTHO05D008892 1.2e-61 240.4 176 70.5
RcHm_v2.0_Chr4g0440151 Rosa chinensis HOM05D007070 ORTHO05D008892 1.6e-61 240.0 174 74.1
Manes.05G098800 Manihot esculenta HOM05D007070 ORTHO05D008892 2.7e-61 239.2 204 64.7
Haze_12036 Corylus avellana HOM05D007070 ORTHO05D008892 3.6e-61 238.8 171 73.1
Gohir.D13G072700 Gossypium hirsutum HOM05D007070 ORTHO05D008892 3.6e-61 238.8 172 72.1
Dinv34174 Davidia involucrata HOM05D007070 ORTHO05D008892 6.1e-61 238.0 157 76.4
QL03p064901 Quercus lobata HOM05D007070 ORTHO05D008892 6.1e-61 238.0 178 70.8
Ah.02g131260 Amaranthus hybridus HOM05D007070 ORTHO05D008892 8.0e-61 237.7 164 72.0
Thecc.02G352500 Theobroma cacao HOM05D007070 ORTHO05D008892 8.0e-61 237.7 176 70.5
FAN17G0782 Fragaria x ananassa HOM05D007070 ORTHO05D008892 1.0e-60 237.3 168 73.2
Cc11_g13320 Coffea canephora HOM05D007070 ORTHO05D008892 1.4e-60 236.9 207 64.3
Ciclev10032797m.g Citrus clementina HOM05D007070 ORTHO05D008892 1.8e-60 236.5 169 72.8
FAN07G2888 Fragaria x ananassa HOM05D007070 ORTHO05D008892 3.0e-60 235.7 160 75.6
SalBow2G0737 Salvia bowleyana HOM05D007070 ORTHO05D008892 4.0e-60 235.3 165 71.5
SalBow2G1571 Salvia bowleyana HOM05D007070 ORTHO05D008892 4.0e-60 235.3 165 71.5
TAR374G1105 Trochodendron aralioides HOM05D007070 ORTHO05D008892 4.0e-60 235.3 170 69.4
FvH4_4g31650 Fragaria vesca HOM05D007070 ORTHO05D008892 8.8e-60 234.2 160 74.4
PGSC0003DMG400000874 Solanum tuberosum HOM05D007070 ORTHO05D008892 8.8e-60 234.2 163 72.4
Actinidia31196 Actinidia chinensis HOM05D007070 ORTHO05D008892 1.2e-59 233.8 156 75.6
CSS0037166 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 1.2e-59 233.8 170 71.8
CSS0050316 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 1.2e-59 233.8 170 71.8
FAN12G3127 Fragaria x ananassa HOM05D007070 ORTHO05D008892 1.2e-59 233.8 160 74.4
DCAR_007140 Daucus carota HOM05D007070 ORTHO05D008892 1.5e-59 233.4 162 74.7
Lj3P1040T26 Lonicera japonica HOM05D007070 ORTHO05D008892 1.5e-59 233.4 166 73.5
ECA236G0127 Erigeron canadensis HOM05D007070 ORTHO05D008892 2.0e-59 233.0 157 75.8
Prupe.1G271300 Prunus persica HOM05D007070 ORTHO05D008892 2.6e-59 232.6 217 65.9
PGR119G1526 Punica granatum HOM05D007070 ORTHO05D008892 2.6e-59 232.6 173 69.4
Solyc01g010640.3 Solanum lycopersicum HOM05D007070 ORTHO05D008892 3.3e-59 232.3 163 71.8
Glyma.02G019200 Glycine max HOM05D007070 ORTHO05D008892 4.4e-59 231.9 201 64.7
Psat2g122360 Pisum sativum HOM05D007070 ORTHO05D008892 4.4e-59 231.9 178 70.2
Sopen01g006270 Solanum pennellii HOM05D007070 ORTHO05D008892 4.4e-59 231.9 163 71.8
Migut.L01320 Erythranthe guttata HOM05D007070 ORTHO05D008892 5.7e-59 231.5 172 69.2
TAR622G0001 Trochodendron aralioides HOM05D007070 ORTHO05D008892 5.7e-59 231.5 166 71.1
AUR62005745 Chenopodium quinoa HOM05D007070 ORTHO05D008892 7.5e-59 231.1 136 83.8
Glyma.01G044500 Glycine max HOM05D007070 ORTHO05D008892 7.5e-59 231.1 179 67.6
Phvul.002G088700 Phaseolus vulgaris HOM05D007070 ORTHO05D008892 7.5e-59 231.1 167 72.5
Hma1.2p1_0598F.1_g186810 Hydrangea macrophylla HOM05D007070 ORTHO05D008892 9.7e-59 230.7 177 69.5
Lalb_Chr10g0098121 Lupinus albus HOM05D007070 ORTHO05D008892 9.7e-59 230.7 161 73.9
Potri.010G093300 Populus trichocarpa HOM05D007070 ORTHO05D008892 9.7e-59 230.7 163 73.0
Ca_04760_v3 Cicer arietinum L. HOM05D007070 ORTHO05D008892 1.3e-58 230.3 175 71.4
ClCG05G024460 Citrullus lanatus HOM05D007070 ORTHO05D008892 1.3e-58 230.3 168 70.2
Thhalv10008846m.g Eutrema salsugineum HOM05D007070 ORTHO05D008892 1.3e-58 230.3 160 71.9
arahy.Tifrunner.gnm1.ann1.P1GF9J Arachis hypogaea HOM05D007070 ORTHO05D008892 2.2e-58 229.6 175 68.6
Sp1g12710 Schrenkiella parvula HOM05D007070 ORTHO05D008892 2.2e-58 229.6 160 72.5
Aqoxy3G03327 Aquilegia oxysepala HOM05D007070 ORTHO05D008892 3.7e-58 228.8 176 68.2
Medtr5g038970 Medicago truncatula HOM05D007070 ORTHO05D008892 3.7e-58 228.8 175 69.7
ATR0564G356 Amborella trichopoda HOM05D007070 ORTHO05D008892 6.3e-58 228.0 174 69.5
CDE05G3062 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 6.3e-58 228.0 169 71.0
Lsat_1_v5_gn_8_52140 Lactuca sativa HOM05D007070 ORTHO05D008892 6.3e-58 228.0 168 70.2
arahy.Tifrunner.gnm1.ann1.H49BTR Arachis hypogaea HOM05D007070 ORTHO05D008892 8.2e-58 227.6 175 67.4
PSO832G2327 Papaver somniferum HOM05D007070 ORTHO05D008892 8.2e-58 227.6 209 62.2
FAN22G1781 Fragaria x ananassa HOM05D007070 ORTHO05D008892 1.4e-57 226.9 157 74.5
HanXRQChr08g0209191 Helianthus annuus HOM05D007070 ORTHO05D008892 3.1e-57 225.7 151 74.2
PSO591G0158 Papaver somniferum HOM05D007070 ORTHO05D008892 4.1e-57 225.3 209 61.7
Sc04g0008310 Simmondsia chinensis HOM05D007070 ORTHO05D008892 4.1e-57 225.3 167 71.3
TWI75G1629 Tripterygium wilfordii HOM05D007070 ORTHO05D008892 4.1e-57 225.3 213 62.0
Carub.0001s1403 Capsella rubella HOM05D007070 ORTHO05D008892 5.3e-57 224.9 165 70.9
CAN.G375.28 Capsicum annuum HOM05D007070 ORTHO05D008892 5.3e-57 224.9 158 71.5
CARHR014780 Cardamine hirsuta HOM05D007070 ORTHO05D008892 5.3e-57 224.9 155 73.5
AL1G26230 Arabidopsis lyrata HOM05D007070 ORTHO05D008892 7.0e-57 224.6 157 72.6
BcaB02g06484 Brassica carinata HOM05D007070 ORTHO05D008892 7.0e-57 224.6 172 68.6
Sabra10G0065800 Salix brachista HOM05D007070 ORTHO05D008892 9.1e-57 224.2 165 70.3
VMungo1215G0639 Vigna mungo HOM05D007070 ORTHO05D008892 9.1e-57 224.2 164 70.7
Peaxi162Scf00026g00288 Petunia axillaris HOM05D007070 ORTHO05D008892 1.2e-56 223.8 158 72.8
AT1G14345 Arabidopsis thaliana HOM05D007070 ORTHO05D008892 1.6e-56 223.4 157 72.0
MSTRG.13406 Avicennia marina HOM05D007070 ORTHO05D008892 2.0e-56 223.0 153 70.6
C05p12140 Brassica napus HOM05D007070 ORTHO05D008892 3.5e-56 222.2 143 76.9
BolC5t29966H Brassica oleracea HOM05D007070 ORTHO05D008892 3.5e-56 222.2 143 76.9
Lj2g0006172 Lotus japonicus HOM05D007070 ORTHO05D008892 3.5e-56 222.2 130 82.3
Rhsim12G0131600 Rhododendron simsii HOM05D007070 ORTHO05D008892 4.5e-56 221.9 169 68.0
RhsimUnG0241900 Rhododendron simsii HOM05D007070 ORTHO05D008892 4.5e-56 221.9 169 68.0
A06p10330 Brassica napus HOM05D007070 ORTHO05D008892 7.7e-56 221.1 132 81.1
BraA06t24215Z Brassica rapa HOM05D007070 ORTHO05D008892 7.7e-56 221.1 132 81.1
Eucgr.G02521 Eucalyptus grandis HOM05D007070 ORTHO05D008892 1.0e-55 220.7 161 68.3
MBI05_g00391_MAGBIO Magnolia biondii HOM05D007070 ORTHO05D008892 3.2e-54 215.7 160 69.4
TPR.G36542 Trifolium pratense HOM05D007070 ORTHO05D008892 1.2e-53 213.8 114 86.8
Aa31LG1G700 Aethionema arabicum HOM05D007070 ORTHO05D008892 2.1e-53 213.0 132 75.0
MSTRG.684 Avicennia marina HOM05D007070 ORTHO05D008892 3.7e-50 202.2 168 65.5
THA.LOC104805942 Tarenaya hassleriana HOM05D007070 ORTHO05D008892 3.7e-50 202.2 123 78.9
CDE05G3277 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 2.4e-49 199.5 110 84.5
HPP92_018585 Vanilla planifolia HOM05D007070 ORTHO05D008892 1.7e-47 193.4 180 56.7
AagrBONN_evm.TU.Sc2ySwM_362.2904 Anthoceros agrestis HOM05D007070 ORTHO05D008892 2.9e-47 192.6 135 65.9
HPP92_018595 Vanilla planifolia HOM05D007070 ORTHO05D008892 8.6e-47 191.0 180 56.1
unitig_699.g19919 Utricularia gibba HOM05D007070 ORTHO05D008892 1.5e-46 190.3 161 62.1
BcaC05g25332 Brassica carinata HOM05D007070 ORTHO05D008892 1.6e-45 186.8 143 68.5
Os03g0170500 Oryza sativa ssp. japonica HOM05D007070 ORTHO05D008892 1.6e-45 186.8 116 74.1
SEGI_28311 Sequoiadendron giganteum HOM05D007070 ORTHO05D008892 1.6e-45 186.8 108 79.6
Zm00001eb402240 Zea mays HOM05D007070 ORTHO05D008892 1.6e-45 186.8 116 72.4
Mapoly0002s0258 Marchantia polymorpha HOM05D007070 ORTHO05D008892 2.1e-45 186.4 168 58.3
SMO329G0045 Selaginella moellendorffii HOM05D007070 ORTHO05D008892 3.6e-45 185.7 129 66.7
CBR_g47945 Chara braunii HOM05D007070 ORTHO05D008892 7.3e-38 161.4 117 60.7
Sc04g0008340 Simmondsia chinensis HOM05D007070 ORTHO05D008892 1.2e-35 154.1 167 53.9
AUR62028813 Chenopodium quinoa HOM05D007070 ORTHO05D008892 7.5e-35 151.4 131 62.6
Cre08.g358540 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 5.0e-23 112.1 120 40.8
MCO16G462 Micromonas commoda HOM05D007070 ORTHO05D008892 1.4e-20 104.0 120 40.8
PRCOL_00004582 Prasinoderma coloniale HOM05D007070 ORTHO05D008892 4.6e-16 89.0 101 43.6
Cre07.g321300 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 3.3e-14 82.8 139 29.5
Atru.chr2.2148 Acer truncatum HOM05D007070 ORTHO05D008892 2.8e-13 79.7 42 81.0


User provided reference genes

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