Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G0295 Cannabis sativa HOM05D006914 ORTHO05D008583 2.2e-51 205.3 102 100.0
Atru.chr7.325 Acer truncatum HOM05D006914 ORTHO05D008583 3.2e-42 174.9 102 81.4
Gohir.D08G256600 Gossypium hirsutum HOM05D006914 ORTHO05D008583 5.5e-42 174.1 102 82.4
Gorai.004G273700 Gossypium raimondii HOM05D006914 ORTHO05D008583 5.5e-42 174.1 102 82.4
Duzib150G1072 Durio zibethinus HOM05D006914 ORTHO05D008583 7.2e-42 173.7 102 82.4
Thecc.09G152600 Theobroma cacao HOM05D006914 ORTHO05D008583 1.6e-41 172.6 102 81.4
COL.COLO4_23940 Corchorus olitorius HOM05D006914 ORTHO05D008583 4.7e-41 171.0 102 82.4
Ciclev10009995m.g Citrus clementina HOM05D006914 ORTHO05D008583 8.0e-41 170.2 102 79.4
FAN23G1758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 1.8e-40 169.1 102 81.4
RcHm_v2.0_Chr2g0085261 Rosa chinensis HOM05D006914 ORTHO05D008583 3.0e-40 168.3 102 82.4
CiPaw.15G165400 Carya illinoinensis HOM05D006914 ORTHO05D008583 4.0e-40 167.9 102 80.4
Nn8g40004 Nelumbo nucifera HOM05D006914 ORTHO05D008583 4.0e-40 167.9 103 81.6
Prupe.7G265800 Prunus persica HOM05D006914 ORTHO05D008583 4.0e-40 167.9 102 82.4
CSS0049762 Camellia sinensis var. sinensis HOM05D006914 ORTHO05D008583 5.2e-40 167.5 103 80.6
MD15G1149500 Malus domestica HOM05D006914 ORTHO05D008583 5.2e-40 167.5 102 81.4
PGR102G2895 Punica granatum HOM05D006914 ORTHO05D008583 5.2e-40 167.5 102 77.5
GSVIVG01008452001 Vitis vinifera HOM05D006914 ORTHO05D008583 6.7e-40 167.2 103 79.6
Duzib187G0910 Durio zibethinus HOM05D006914 ORTHO05D008583 8.8e-40 166.8 102 78.4
FAN26G2758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 8.8e-40 166.8 102 80.4
AUR62015440 Chenopodium quinoa HOM05D006914 ORTHO05D008583 1.2e-39 166.4 100 81.0
EL10Ac3g05865 Beta vulgaris HOM05D006914 ORTHO05D008583 1.5e-39 166.0 100 80.0
TWI34G0278 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 2.0e-39 165.6 102 79.4
AUR62002229 Chenopodium quinoa HOM05D006914 ORTHO05D008583 2.6e-39 165.2 100 81.0
Hma1.2p1_2085F.1_g313670 Hydrangea macrophylla HOM05D006914 ORTHO05D008583 2.6e-39 165.2 100 78.0
FvH4_1g00640 Fragaria vesca HOM05D006914 ORTHO05D008583 3.3e-39 164.9 102 80.4
MD02G1005200 Malus domestica HOM05D006914 ORTHO05D008583 3.3e-39 164.9 102 80.4
Potri.006G181400 Populus trichocarpa HOM05D006914 ORTHO05D008583 3.3e-39 164.9 102 79.4
Cpa.g.sc46.184 Carica papaya HOM05D006914 ORTHO05D008583 7.5e-39 163.7 102 81.4
Cfa020795 Carpinus fangiana HOM05D006914 ORTHO05D008583 7.5e-39 163.7 102 74.5
Hund04582 Selenicereus undatus HOM05D000185 ORTHO05D000105 7.5e-39 163.7 100 79.0
Nitab4.5_0009003g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 1.3e-38 162.9 103 78.6
Dinv41349 Davidia involucrata HOM05D006914 ORTHO05D008583 1.7e-38 162.5 97 79.4
TWI63G1652 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 3.7e-38 161.4 102 76.5
ECA240G0809 Erigeron canadensis HOM05D006914 ORTHO05D008583 4.8e-38 161.0 103 77.7
HanXRQChr03g0066101 Helianthus annuus HOM05D006914 ORTHO05D008583 6.3e-38 160.6 103 78.6
Nitab4.5_0001448g0020 Nicotiana tabacum HOM05D006914 ORTHO05D008583 6.3e-38 160.6 103 77.7
QL02p093962 Quercus lobata HOM05D006914 ORTHO05D008583 6.3e-38 160.6 101 78.2
TPR.G25932 Trifolium pratense HOM05D006914 ORTHO05D008583 6.3e-38 160.6 102 74.5
Ah.13g066550 Amaranthus hybridus HOM05D006914 ORTHO05D008583 8.2e-38 160.2 100 78.0
MELO3C004120.2 Cucumis melo HOM05D006914 ORTHO05D008583 1.8e-37 159.1 102 75.5
Lsat_1_v5_gn_7_49520 Lactuca sativa HOM05D006914 ORTHO05D008583 2.4e-37 158.7 97 79.4
ClCG02G014340 Citrullus lanatus HOM05D006914 ORTHO05D008583 9.1e-37 156.8 102 74.5
Glyma.04G155300 Glycine max HOM05D006914 ORTHO05D008583 1.6e-36 156.0 102 73.5
Manes.14G142700 Manihot esculenta HOM05D006914 ORTHO05D008583 2.0e-36 155.6 98 77.6
Actinidia23563 Actinidia chinensis HOM05D006914 ORTHO05D008583 2.7e-36 155.2 93 81.7
Aqoxy5G02159 Aquilegia oxysepala HOM05D006914 ORTHO05D008583 2.7e-36 155.2 101 77.2
Nitab4.5_0000233g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 2.7e-36 155.2 100 76.0
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 5.9e-36 154.1 98 74.5
Actinidia28379 Actinidia chinensis HOM05D006914 ORTHO05D008583 7.7e-36 153.7 94 81.9
Glyma.06G225000 Glycine max HOM05D006914 ORTHO05D008583 1.3e-35 152.9 102 72.5
Lalb_Chr11g0072501 Lupinus albus HOM05D006914 ORTHO05D008583 1.3e-35 152.9 102 73.5
Sed0012601 Sechium edule HOM05D006914 ORTHO05D008583 1.7e-35 152.5 102 73.5
Peaxi162Scf00156g01316 Petunia axillaris HOM05D006914 ORTHO05D008583 2.2e-35 152.1 102 75.5
Phvul.007G242700 Phaseolus vulgaris HOM05D006914 ORTHO05D008583 2.2e-35 152.1 102 71.6
PSO111G0010 Papaver somniferum HOM05D006914 ORTHO05D008583 8.5e-35 150.2 98 72.4
Sed0026010 Sechium edule HOM05D006914 ORTHO05D008583 8.5e-35 150.2 102 72.5
AL8G33910 Arabidopsis lyrata HOM05D006914 ORTHO05D008583 1.1e-34 149.8 90 83.3
Ca_02367_v3 Cicer arietinum L. HOM05D006914 ORTHO05D008583 1.1e-34 149.8 95 76.8
Cc06_g14590 Coffea canephora HOM05D006914 ORTHO05D008583 1.1e-34 149.8 100 76.0
Medtr2g046160 Medicago truncatula HOM05D006914 ORTHO05D008583 1.5e-34 149.4 102 68.6
VMungo0720G1978 Vigna mungo HOM05D006914 ORTHO05D008583 1.9e-34 149.1 100 73.0
TAR383G0505 Trochodendron aralioides HOM05D006914 ORTHO05D008583 2.5e-34 148.7 90 81.1
CsaV3_2G007660 Cucumis sativus L. HOM05D006914 ORTHO05D008583 3.2e-34 148.3 93 78.5
CARHR271600 Cardamine hirsuta HOM05D006914 ORTHO05D008583 9.4e-34 146.7 90 82.2
AT5G57860 Arabidopsis thaliana HOM05D006914 ORTHO05D008583 1.2e-33 146.4 90 80.0
MSTRG.10711 Avicennia marina HOM05D006914 ORTHO05D008583 1.6e-33 146.0 100 72.0
Sp6g19550 Schrenkiella parvula HOM05D006914 ORTHO05D008583 2.1e-33 145.6 90 80.0
Carub.0008s1839 Capsella rubella HOM05D006914 ORTHO05D008583 2.7e-33 145.2 90 78.9
Lj6g0027463 Lotus japonicus HOM05D006914 ORTHO05D008583 4.7e-33 144.4 102 65.7
Oeu055276.1 Olea europaea HOM05D006914 ORTHO05D008583 4.7e-33 144.4 100 74.0
Migut.K00305 Erythranthe guttata HOM05D006914 ORTHO05D008583 8.0e-33 143.7 99 70.7
Psat1g017920 Pisum sativum HOM05D006914 ORTHO05D008583 8.0e-33 143.7 102 71.6
Thhalv10015128m.g Eutrema salsugineum HOM05D006914 ORTHO05D008583 1.4e-32 142.9 90 77.8
CDE05G0490 Ceratophyllum demersum HOM05D006914 ORTHO05D008583 3.0e-32 141.7 103 68.9
Oeu021334.1 Olea europaea HOM05D006914 ORTHO05D008583 5.2e-32 141.0 102 70.6
C02p13800 Brassica napus HOM05D006914 ORTHO05D008583 8.8e-32 140.2 90 76.7
BolC2t07499H Brassica oleracea HOM05D006914 ORTHO05D008583 8.8e-32 140.2 90 76.7
Sopen05g034470 Solanum pennellii HOM05D006914 ORTHO05D008583 1.5e-31 139.4 89 76.4
Zm00001eb329210 Zea mays HOM05D006914 ORTHO05D008583 2.0e-31 139.0 93 75.3
A03p12500 Brassica napus HOM05D006914 ORTHO05D008583 5.7e-31 137.5 90 75.6
BraA03t10565Z Brassica rapa HOM05D006914 ORTHO05D008583 5.7e-31 137.5 90 75.6
BolC3t13912H Brassica oleracea HOM05D006914 ORTHO05D008583 7.5e-31 137.1 90 75.6
ATR0763G197 Amborella trichopoda HOM05D006914 ORTHO05D008583 1.3e-30 136.3 95 67.4
Os03g0364000 Oryza sativa ssp. japonica HOM05D006914 ORTHO05D008583 1.7e-30 136.0 94 74.5
unitig_748.g7196 Utricularia gibba HOM05D006914 ORTHO05D008583 1.7e-30 136.0 89 75.3
A02p08150 Brassica napus HOM05D006914 ORTHO05D008583 4.8e-30 134.4 90 73.3
C09p49750 Brassica napus HOM05D006914 ORTHO05D008583 6.3e-30 134.0 90 73.3
HPP92_020604 Vanilla planifolia HOM05D006914 ORTHO05D008583 3.1e-29 131.7 90 72.2
Aa31LG3G13700 Aethionema arabicum HOM05D006914 ORTHO05D008583 9.1e-29 130.2 90 70.0
TAR626G0439 Trochodendron aralioides HOM05D006914 ORTHO05D008583 5.0e-27 124.4 74 81.1
Rhsim03G0258700 Rhododendron simsii HOM05D000079 ORTHO05D000211 4.2e-26 121.3 74 79.7
PSO782G4630 Papaver somniferum HOM05D006914 ORTHO05D008583 1.2e-25 119.8 98 59.2
CAN.G694.81 Capsicum annuum HOM05D006914 ORTHO05D008583 2.1e-25 119.0 79 74.7
Haze_19153 Corylus avellana HOM05D006914 ORTHO05D008583 3.6e-25 118.2 74 75.7
BcaB05g22379 Brassica carinata HOM05D006914 ORTHO05D008583 1.0e-24 116.7 90 67.8
vmacro06059 Vaccinium macrocarpon HOM05D000079 ORTHO05D000211 1.0e-24 116.7 74 74.3
Eucgr.C02509 Eucalyptus grandis HOM05D006914 ORTHO05D008583 3.0e-24 115.2 74 77.0
PGSC0003DMG400023462 Solanum tuberosum HOM05D006914 ORTHO05D008583 4.0e-24 114.8 74 75.7
BraA02t05889Z Brassica rapa HOM05D006914 ORTHO05D008583 6.8e-24 114.0 79 72.2
Pp3c19_17380 Physcomitrium patens HOM05D006914 ORTHO05D008583 6.8e-24 114.0 98 60.2
AagrBONN_evm.TU.Sc2ySwM_362.2477 Anthoceros agrestis HOM05D006914 ORTHO05D008583 9.8e-23 110.2 91 64.8
arahy.Tifrunner.gnm1.ann1.6E7PQ4 Arachis hypogaea HOM05D006914 ORTHO05D008583 2.2e-22 109.0 74 71.6
arahy.Tifrunner.gnm1.ann1.S2MTQV Arachis hypogaea HOM05D006914 ORTHO05D008583 6.3e-22 107.5 74 70.3
Gohir.A08G236100 Gossypium hirsutum HOM05D006914 ORTHO05D008583 2.4e-21 105.5 66 77.3
SGA_v2.0_scaffold222G42803 Striga asiatica HOM05D006914 ORTHO05D008583 3.1e-21 105.1 74 70.3
Mapoly0004s0198 Marchantia polymorpha HOM05D006914 ORTHO05D008583 5.4e-21 104.4 76 69.7
SMO304G0019 Selaginella moellendorffii HOM05D006914 ORTHO05D008583 3.5e-20 101.7 73 68.5
CBR_g51779 Chara braunii HOM05D006914 ORTHO05D008583 1.0e-19 100.1 96 56.2
Cre12.g554750 Chlamydomonas reinhardtii HOM05D006914 ORTHO05D008583 1.2e-17 93.2 85 56.5
Sc13g0007320 Simmondsia chinensis HOM05D006914 ORTHO05D008583 4.7e-17 91.3 62 74.2
AagrBONN_evm.TU.Sc2ySwM_228.3148 Anthoceros agrestis HOM05D006914 ORTHO05D008583 1.0e-16 90.1 77 58.4
Haze_19154 Corylus avellana HOM05D002983 ORTHO05D003451 4.4e-15 84.7 62 69.4
Pp3c17_5060 Physcomitrium patens HOM05D006914 ORTHO05D008583 4.4e-15 84.7 99 48.5
PRCOL_00002080 Prasinoderma coloniale HOM05D006914 ORTHO05D008583 1.1e-13 80.1 83 56.6
BcaC04g19922 Brassica carinata HOM05D006914 ORTHO05D008583 7.0e-13 77.4 52 73.1
SHI02838 Sapria himalayana HOM05D006914 ORTHO05D008583 9.2e-13 77.0 87 47.1
Aa31LG1G14450 Aethionema arabicum HOM05D006914 ORTHO05D008583 2.0e-12 75.9 73 54.8
MCO12G243 Micromonas commoda HOM05D006914 ORTHO05D008583 6.8e-08 60.8 108 37.0
C08p16940 Brassica napus HOM05D006914 ORTHO05D008583 9.8e-07 57.0 36 72.2
BraA10t43605Z Brassica rapa HOM05D006914 ORTHO05D008583 1.7e-06 56.2 30 86.7


User provided reference genes

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