Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G2163 Cannabis sativa HOM05D007819 ORTHO05D009848 3.6e-157 558.1 273 100.0
Manes.04G025500 Manihot esculenta HOM05D007819 ORTHO05D009848 1.8e-124 449.5 269 78.4
Thecc.09G261200 Theobroma cacao HOM05D007819 ORTHO05D009848 1.3e-122 443.4 269 78.1
Cpa.g.sc318.6 Carica papaya HOM05D007819 ORTHO05D009848 8.5e-122 440.7 267 79.0
Duzib168G1088 Durio zibethinus HOM05D007819 ORTHO05D009848 1.1e-121 440.3 284 74.6
Gorai.006G121000 Gossypium raimondii HOM05D007819 ORTHO05D009848 4.2e-121 438.3 267 77.2
Gohir.A09G105900 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.2e-120 436.8 267 77.2
PSO339G1273 Papaver somniferum HOM05D007819 ORTHO05D009848 1.2e-120 436.8 269 77.3
TAR623G0280 Trochodendron aralioides HOM05D007819 ORTHO05D009848 2.1e-120 436.0 260 79.6
PSO384G2242 Papaver somniferum HOM05D007819 ORTHO05D009848 1.4e-119 433.3 258 79.8
Nn2g10668 Nelumbo nucifera HOM05D007819 ORTHO05D009848 3.0e-119 432.2 270 74.8
COL.COLO4_25254 Corchorus olitorius HOM05D007819 ORTHO05D009848 2.0e-118 429.5 259 77.6
PGR102G1079 Punica granatum HOM05D007819 ORTHO05D009848 2.5e-118 429.1 261 77.8
FAN21G3467 Fragaria x ananassa HOM05D007819 ORTHO05D009848 4.3e-118 428.3 269 77.0
RcHm_v2.0_Chr5g0060991 Rosa chinensis HOM05D007819 ORTHO05D009848 7.4e-118 427.6 270 77.0
TWI75G0698 Tripterygium wilfordii HOM05D007819 ORTHO05D009848 9.7e-118 427.2 270 75.6
FAN25G2530 Fragaria x ananassa HOM05D007819 ORTHO05D009848 6.3e-117 424.5 269 76.2
Atru.chr3.3713 Acer truncatum HOM05D007819 ORTHO05D009848 3.1e-116 422.2 271 74.5
Migut.N02626 Erythranthe guttata HOM05D007819 ORTHO05D009848 3.1e-116 422.2 272 72.8
Oeu017391.1 Olea europaea HOM05D007819 ORTHO05D009848 3.1e-116 422.2 269 73.6
Gohir.D05G077600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.3e-114 416.8 269 72.1
Gorai.009G079100 Gossypium raimondii HOM05D007819 ORTHO05D009848 1.3e-114 416.8 269 72.1
Gohir.D09G102600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 2.9e-114 415.6 249 78.3
Gohir.A05G074800 Gossypium hirsutum HOM05D007819 ORTHO05D009848 5.0e-114 414.8 269 72.1
Cc01_g11630 Coffea canephora HOM05D007819 ORTHO05D009848 3.2e-113 412.1 252 75.8
Gohir.A05G074866 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.2e-112 410.2 269 71.4
Sopen06g001100 Solanum pennellii HOM05D007819 ORTHO05D009848 2.1e-112 409.5 259 73.0
Eucgr.B02464 Eucalyptus grandis HOM05D007819 ORTHO05D009848 9.7e-110 400.6 260 73.1
MD11G1124900 Malus domestica HOM05D007819 ORTHO05D009848 1.1e-108 397.1 269 69.9
Lsat_1_v5_gn_2_25861 Lactuca sativa HOM05D007819 ORTHO05D009848 1.5e-107 393.3 247 74.1
CiPaw.13G106200 Carya illinoinensis HOM05D007819 ORTHO05D009848 2.0e-107 392.9 254 70.9
MD03G1111000 Malus domestica HOM05D007819 ORTHO05D009848 3.8e-106 388.7 269 68.0
CiPaw.14G077700 Carya illinoinensis HOM05D007819 ORTHO05D009848 5.0e-106 388.3 265 69.1
FAN16G1444 Fragaria x ananassa HOM05D007819 ORTHO05D009848 5.0e-106 388.3 343 59.5
QL01p036876 Quercus lobata HOM05D007819 ORTHO05D009848 1.6e-104 383.3 266 68.4
CiPaw.13G106300 Carya illinoinensis HOM05D007819 ORTHO05D009848 2.1e-104 382.9 261 70.5
Hma1.2p1_2033F.1_g311900 Hydrangea macrophylla HOM05D007819 ORTHO05D009848 6.1e-104 381.3 245 72.7
Nitab4.5_0007369g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 6.1e-104 381.3 285 65.3
CiPaw.14G077600 Carya illinoinensis HOM05D007819 ORTHO05D009848 6.3e-101 371.3 269 65.1
Nitab4.5_0000888g0180 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.8e-100 369.8 276 64.5
FvH4_3g33520 Fragaria vesca HOM05D007819 ORTHO05D009848 5.2e-95 351.7 212 79.7
AUR62006507 Chenopodium quinoa HOM05D007819 ORTHO05D009848 7.5e-94 347.8 296 57.4
DCAR_005475 Daucus carota HOM05D007819 ORTHO05D009848 7.5e-94 347.8 219 72.6
unitig_699.g19198 Utricularia gibba HOM05D007819 ORTHO05D009848 1.1e-92 344.0 259 63.3
Lj1A183T52 Lonicera japonica HOM05D007819 ORTHO05D009848 3.8e-90 335.5 252 67.5
Mapoly0103s0031 Marchantia polymorpha HOM05D007819 ORTHO05D009848 3.8e-90 335.5 253 62.8
Sc21g0003720 Simmondsia chinensis HOM05D007819 ORTHO05D009848 5.5e-89 331.6 226 69.9
HPP92_025075 Vanilla planifolia HOM05D007819 ORTHO05D009848 1.1e-84 317.4 258 57.0
Zm00001eb013150 Zea mays HOM05D007819 ORTHO05D009848 1.4e-84 317.0 259 59.5
Haze_23935 Corylus avellana HOM05D007819 ORTHO05D009848 5.9e-83 311.6 207 74.4
Ciclev10029813m.g Citrus clementina HOM05D007819 ORTHO05D009848 5.0e-82 308.5 259 60.6
Peaxi162Scf00389g00619 Petunia axillaris HOM05D007819 ORTHO05D009848 5.0e-82 308.5 248 62.1
Prupe.6G093600 Prunus persica HOM05D007819 ORTHO05D009848 7.2e-81 304.7 190 74.7
SGA_v2.0_scaffold2G00920 Striga asiatica HOM05D007819 ORTHO05D009848 2.4e-76 289.7 232 60.8
Nitab4.5_0001578g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 7.0e-76 288.1 233 60.5
Pp3c21_1570 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.6e-75 287.0 267 51.3
Nitab4.5_0000022g0250 Nicotiana tabacum HOM05D007819 ORTHO05D009848 4.5e-75 285.4 214 67.8
Dinv32800 Davidia involucrata HOM05D007819 ORTHO05D009848 2.1e-72 276.6 189 69.8
Solyc06g005100.3 Solanum lycopersicum HOM05D007819 ORTHO05D009848 2.8e-72 276.2 176 69.9
CAN.G1171.1 Capsicum annuum HOM05D007819 ORTHO05D009848 3.4e-70 269.2 251 58.2
Mapoly0155s0016 Marchantia polymorpha HOM05D007819 ORTHO05D009848 2.9e-69 266.2 274 50.0
Pp3c9_23950 Physcomitrium patens HOM05D007819 ORTHO05D009848 8.3e-69 264.6 255 51.4
Pp3c15_22830 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.9e-68 263.5 255 51.0
AagrBONN_evm.TU.Sc2ySwM_344.1297 Anthoceros agrestis HOM05D007819 ORTHO05D009848 1.6e-67 260.4 251 51.8
AagrBONN_evm.TU.Sc2ySwM_344.3840 Anthoceros agrestis HOM05D007819 ORTHO05D009848 7.8e-67 258.1 255 50.6
Mapoly0008s0213 Marchantia polymorpha HOM05D007819 ORTHO05D009848 3.0e-66 256.1 251 50.6
GSVIVG01025124001 Vitis vinifera HOM05D007819 ORTHO05D009848 5.6e-65 251.9 166 72.9
Mapoly0035s0019 Marchantia polymorpha HOM05D007819 ORTHO05D009848 3.6e-64 249.2 252 48.4
PGSC0003DMG401025397 Solanum tuberosum HOM05D007819 ORTHO05D009848 1.5e-62 243.8 155 72.3
MSTRG.12613 Avicennia marina HOM05D007819 ORTHO05D009848 2.6e-62 243.0 172 66.3
AUR62025022 Chenopodium quinoa HOM05D007819 ORTHO05D009848 1.8e-55 220.3 217 52.5
Mapoly0088s0067 Marchantia polymorpha HOM05D000370 ORTHO05D001335 1.0e-50 204.5 277 37.5
Migut.O00707 Erythranthe guttata HOM05D007819 ORTHO05D009848 8.1e-48 194.9 135 65.2
Pp3c12_18930 Physcomitrium patens HOM05D000370 ORTHO05D009848 8.1e-48 194.9 262 36.3
Pp3c12_18938 Physcomitrium patens HOM05D000370 ORTHO05D009848 8.1e-48 194.9 262 36.3
Pp3c3_24540 Physcomitrium patens HOM05D007819 ORTHO05D009848 2.4e-47 193.4 262 35.1
EL10Ac9g22426 Beta vulgaris HOM05D007819 ORTHO05D009848 8.7e-42 174.9 147 61.2
MSTRG.12612 Avicennia marina HOM05D007819 ORTHO05D009848 1.4e-39 167.5 97 81.4
SalBow3G4000 Salvia bowleyana HOM05D007819 ORTHO05D009848 2.0e-38 163.7 104 75.0
QL01p036758 Quercus lobata HOM05D007819 ORTHO05D009848 1.0e-34 151.4 94 72.3
CSS0001112 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 3.9e-34 149.4 97 75.3
CSS0025937 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 3.9e-34 149.4 97 75.3
QL01p036766 Quercus lobata HOM05D007819 ORTHO05D009848 1.1e-33 147.9 88 77.3
Os03g0287100 Oryza sativa ssp. japonica HOM05D007819 ORTHO05D009848 3.8e-29 132.9 103 60.2
Oeu012676.1 Olea europaea HOM05D007819 ORTHO05D009848 7.4e-25 118.6 74 71.6
EL10Ac9g22427 Beta vulgaris HOM05D007819 ORTHO05D009848 1.3e-24 117.9 117 52.1
FAN11G3664 Fragaria x ananassa HOM05D007819 ORTHO05D009848 7.6e-22 108.6 66 83.3
CiPaw.09G094500 Carya illinoinensis HOM05D007819 ORTHO05D009848 3.5e-11 73.2 44 75.0
AagrBONN_evm.TU.Sc2ySwM_117.2524 Anthoceros agrestis HOM05D007819 ORTHO05D009848 9.7e-09 65.1 51 51.0


User provided reference genes

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