Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 2.5e-292 1008.1 506 100.0
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 7.6e-217 757.3 514 76.3
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 9.3e-215 750.4 514 74.3
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 1.1e-212 743.4 514 74.5
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 1.3e-211 740.0 514 74.1
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 1.6e-211 739.6 507 73.4
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 1.2e-209 733.4 518 72.8
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 3.4e-209 731.9 513 73.7
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 7.6e-209 730.7 446 80.7
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 1.9e-207 726.1 499 74.9
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 9.3e-207 723.8 448 79.5
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 9.3e-207 723.8 476 77.5
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 9.3e-207 723.8 511 71.4
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.2e-206 723.4 513 71.3
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 2.7e-206 722.2 492 75.0
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 2.7e-206 722.2 476 77.3
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 2.7e-206 722.2 465 77.6
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 1.3e-205 719.9 510 71.0
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 1.7e-205 719.5 466 77.5
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 3.0e-205 718.8 513 71.5
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 3.0e-205 718.8 472 76.9
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 5.1e-205 718.0 511 70.8
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 5.1e-205 718.0 514 72.4
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 1.1e-204 716.8 514 70.8
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 1.5e-204 716.5 512 70.1
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 2.1e-203 712.6 472 76.3
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 8.1e-203 710.7 517 72.1
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 5.3e-202 708.0 516 70.2
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 5.3e-202 708.0 514 69.8
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 6.9e-202 707.6 448 77.5
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 6.9e-202 707.6 517 70.8
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 4.5e-201 704.9 517 70.6
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 3.8e-200 701.8 509 69.9
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 4.9e-200 701.4 547 68.4
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 1.9e-199 699.5 511 70.1
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 3.2e-199 698.7 513 69.0
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 4.2e-199 698.4 450 77.3
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 7.1e-199 697.6 519 69.9
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 1.6e-198 696.4 450 76.9
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 1.6e-198 696.4 518 69.7
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 2.1e-198 696.0 516 68.4
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 1.5e-196 689.9 514 67.9
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 4.3e-196 688.3 513 68.6
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 6.2e-195 684.5 520 67.9
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 6.9e-194 681.0 515 68.3
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 2.6e-193 679.1 449 74.8
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 1.0e-192 677.2 521 67.4
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 4.2e-191 671.8 446 74.2
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 4.2e-191 671.8 513 68.0
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 5.5e-191 671.4 510 67.5
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 1.2e-190 670.2 473 71.0
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 1.2e-190 670.2 473 71.0
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 2.7e-190 669.1 513 67.6
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 2.3e-189 666.0 473 70.8
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 5.1e-189 664.8 440 74.1
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 9.6e-188 660.6 490 69.0
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 2.1e-187 659.4 447 72.3
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 2.1e-187 659.4 492 70.1
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 1.1e-186 657.1 447 73.2
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 4.1e-186 655.2 462 71.2
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 4.1e-186 655.2 443 72.0
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 2.1e-182 642.9 454 73.8
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 7.9e-182 641.0 471 67.7
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 3.9e-181 638.6 506 64.8
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 2.2e-179 632.9 447 70.0
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 2.4e-178 629.4 447 69.8
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 4.1e-178 628.6 516 62.6
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 2.6e-177 625.9 440 70.2
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 5.9e-177 624.8 447 69.6
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 7.7e-177 624.4 447 69.4
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 3.8e-176 622.1 514 62.8
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 1.4e-175 620.2 516 61.4
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 1.0e-173 614.0 488 66.6
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 1.0e-173 614.0 522 61.9
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 1.8e-173 613.2 489 63.0
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 5.1e-173 611.7 412 72.1
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 1.5e-172 610.1 497 62.4
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 7.4e-172 607.8 510 62.7
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 7.4e-172 607.8 510 61.0
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 6.3e-171 604.7 460 65.7
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 8.2e-171 604.4 519 60.3
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 1.1e-170 604.0 515 59.6
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 9.1e-170 600.9 441 68.3
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 1.7e-168 596.7 461 65.1
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 2.9e-168 595.9 479 62.6
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 5.0e-168 595.1 475 62.5
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 8.5e-168 594.3 468 62.8
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 1.9e-167 593.2 472 62.7
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 5.5e-167 591.7 470 62.8
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 2.1e-166 589.7 493 61.9
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 9.1e-162 574.3 458 62.4
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 1.5e-161 573.5 515 56.5
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 8.8e-157 557.8 380 74.7
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 4.4e-156 555.4 397 70.3
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 4.8e-147 525.4 353 72.0
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 4.1e-138 495.7 426 58.2
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 1.6e-137 493.8 420 58.1
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 1.5e-135 487.3 429 56.9
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 3.0e-128 463.0 299 76.6
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 9.5e-127 458.0 436 57.3
SEGI_38470 Sequoiadendron giganteum HOM05D006841 ORTHO05D008607 6.2e-110 402.1 423 48.0
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 3.1e-109 399.8 255 76.9
HPP92_025104 Vanilla planifolia HOM05D006841 ORTHO05D008607 8.4e-107 391.7 342 56.7
Mapoly0068s0098 Marchantia polymorpha HOM05D006841 ORTHO05D008607 5.6e-95 352.4 448 44.0
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.3e-91 341.3 422 48.1
Nn2g10947 Nelumbo nucifera HOM05D006841 ORTHO05D008607 1.1e-85 321.6 258 64.3
Nn2g13216 Nelumbo nucifera HOM05D006841 ORTHO05D008607 2.2e-75 287.3 188 75.0
Pp3c12_8330 Physcomitrium patens HOM05D006841 ORTHO05D008607 3.7e-70 270.0 425 37.2
Cpa.g.sc2.394 Carica papaya HOM05D006841 ORTHO05D008607 5.9e-68 262.7 150 82.0
SMO304G0125 Selaginella moellendorffii HOM05D006841 ORTHO05D008607 8.7e-64 248.8 417 35.3
MD11G1194000 Malus domestica HOM05D006841 ORTHO05D008607 4.8e-62 243.0 134 86.6
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 6.1e-49 199.5 170 61.2
Oeu034513.1 Olea europaea HOM05D006841 ORTHO05D008607 5.3e-37 159.8 228 43.0
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 4.5e-36 156.8 228 42.5
AagrBONN_evm.TU.Sc2ySwM_117.787 Anthoceros agrestis HOM05D006841 ORTHO05D008607 6.1e-33 146.4 191 42.4
Oeu034514.1 Olea europaea HOM05D006841 ORTHO05D008607 8.0e-33 146.0 126 57.1
Oeu034518.1 Olea europaea HOM05D006841 ORTHO05D008607 5.2e-32 143.3 148 52.0
VMungo0331G0799 Vigna mungo HOM05D000172 ORTHO05D004529 2.1e-25 121.3 140 47.1
Oeu019495.1 Olea europaea HOM05D006841 ORTHO05D008607 4.4e-15 87.0 143 36.4


User provided reference genes

Program Settings