Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3881 Cannabis sativa HOM05D006006 ORTHO05D007566 1.3e-204 716.1 346 100.0
Prupe.8G021400 Prunus persica HOM05D006006 ORTHO05D007566 3.3e-155 552.0 344 75.3
Manes.02G175900 Manihot esculenta HOM05D006006 ORTHO05D007566 6.9e-153 544.3 337 73.9
Cfa018352 Carpinus fangiana HOM05D006006 ORTHO05D007566 2.4e-150 535.8 345 72.5
MD05G1017500 Malus domestica HOM05D006006 ORTHO05D007566 3.2e-150 535.4 344 72.7
MD10G1017500 Malus domestica HOM05D006006 ORTHO05D007566 7.1e-150 534.3 344 73.3
Thecc.08G145800 Theobroma cacao HOM05D006006 ORTHO05D007566 9.3e-150 533.9 349 71.9
COL.COLO4_04848 Corchorus olitorius HOM05D006006 ORTHO05D007566 7.9e-149 530.8 346 73.1
Duzib093G0547 Durio zibethinus HOM05D006006 ORTHO05D007566 7.9e-149 530.8 347 72.0
TAR381G0495 Trochodendron aralioides HOM05D006006 ORTHO05D007566 2.3e-148 529.3 345 71.6
QL02p024995 Quercus lobata HOM05D006006 ORTHO05D007566 1.1e-147 526.9 348 72.1
CiPaw.15G020800 Carya illinoinensis HOM05D006006 ORTHO05D007566 1.5e-147 526.6 346 72.3
Eucgr.F04261 Eucalyptus grandis HOM05D006006 ORTHO05D007566 1.9e-147 526.2 337 72.1
RcHm_v2.0_Chr6g0276791 Rosa chinensis HOM05D006006 ORTHO05D007566 2.5e-147 525.8 347 71.2
GSVIVG01010048001 Vitis vinifera HOM05D006006 ORTHO05D007566 7.4e-147 524.2 345 70.7
Ciclev10001700m.g Citrus clementina HOM05D006006 ORTHO05D007566 9.6e-147 523.9 346 71.7
Nn1g06190 Nelumbo nucifera HOM05D006006 ORTHO05D007566 2.8e-146 522.3 345 71.3
FvH4_2g14460 Fragaria vesca HOM05D006006 ORTHO05D007566 3.7e-146 521.9 345 71.3
CSS0049727 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 6.2e-146 521.2 346 72.5
FAN24G1565 Fragaria x ananassa HOM05D006006 ORTHO05D007566 1.4e-145 520.0 345 71.0
Haze_17707 Corylus avellana HOM05D006006 ORTHO05D007566 1.8e-145 519.6 375 66.9
Gorai.005G081300 Gossypium raimondii HOM05D006006 ORTHO05D007566 2.4e-145 519.2 346 71.4
PGSC0003DMG400017575 Solanum tuberosum HOM05D006006 ORTHO05D007566 5.3e-145 518.1 344 70.6
Solyc06g060460.3 Solanum lycopersicum HOM05D006006 ORTHO05D007566 6.9e-145 517.7 344 70.9
Atru.chr13.1712 Acer truncatum HOM05D006006 ORTHO05D007566 1.2e-144 516.9 346 69.4
Gohir.D02G072100 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.2e-144 516.9 346 70.8
Sopen06g020580 Solanum pennellii HOM05D006006 ORTHO05D007566 1.2e-144 516.9 344 70.6
FAN27G0920 Fragaria x ananassa HOM05D006006 ORTHO05D007566 2.0e-144 516.2 345 70.7
CiPaw.16G016900 Carya illinoinensis HOM05D006006 ORTHO05D007566 2.6e-144 515.8 347 70.0
FAN15G3392 Fragaria x ananassa HOM05D006006 ORTHO05D007566 2.6e-144 515.8 345 70.1
CSS0044653 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 3.4e-144 515.4 346 71.7
Nitab4.5_0000633g0110 Nicotiana tabacum HOM05D006006 ORTHO05D007566 7.6e-144 514.2 345 70.1
CAN.G62.45 Capsicum annuum HOM05D006006 ORTHO05D007566 1.0e-143 513.8 346 70.8
Gohir.A02G066200 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.4e-142 510.0 346 69.9
Glyma.14G123000 Glycine max HOM05D006006 ORTHO05D007566 5.5e-142 508.1 347 69.5
Cpa.g.sc49.54 Carica papaya HOM05D006006 ORTHO05D007566 7.1e-142 507.7 345 68.7
Glyma.13G039000 Glycine max HOM05D006006 ORTHO05D007566 7.1e-142 507.7 347 70.3
THA.LOC104813696 Tarenaya hassleriana HOM05D006006 ORTHO05D007566 1.6e-141 506.5 346 69.1
CsaV3_7G024870 Cucumis sativus L. HOM05D006006 ORTHO05D007566 2.1e-141 506.1 346 68.5
FAN20G0686 Fragaria x ananassa HOM05D006006 ORTHO05D007566 2.7e-141 505.8 377 65.3
ClCG09G009860 Citrullus lanatus HOM05D006006 ORTHO05D007566 4.6e-141 505.0 346 68.2
Lj7A365T41 Lonicera japonica HOM05D006006 ORTHO05D007566 4.6e-141 505.0 345 68.4
Oeu051259.1 Olea europaea HOM05D006006 ORTHO05D007566 4.6e-141 505.0 345 69.6
Potri.002G071300 Populus trichocarpa HOM05D006006 ORTHO05D007566 7.9e-141 504.2 334 71.0
Aqoxy6G00385 Aquilegia oxysepala HOM05D006006 ORTHO05D007566 1.8e-140 503.1 336 69.3
Gohir.D03G061500 Gossypium hirsutum HOM05D006006 ORTHO05D007566 3.9e-140 501.9 345 69.6
Gorai.013G105300 Gossypium raimondii HOM05D006006 ORTHO05D007566 3.9e-140 501.9 345 69.3
Sabra02G0056100 Salix brachista HOM05D006006 ORTHO05D007566 1.1e-139 500.4 334 70.1
PGR042G3502 Punica granatum HOM05D006006 ORTHO05D007566 1.9e-139 499.6 338 71.9
EL10Ac9g20647 Beta vulgaris HOM05D006006 ORTHO05D007566 7.4e-139 497.7 346 67.9
MBI03_g11319_MAGBIO Magnolia biondii HOM05D006006 ORTHO05D007566 9.7e-139 497.3 342 68.1
Thhalv10008107m.g Eutrema salsugineum HOM05D006006 ORTHO05D007566 1.6e-138 496.5 347 70.3
Phvul.001G072900 Phaseolus vulgaris HOM05D006006 ORTHO05D007566 2.2e-138 496.1 345 68.1
Lalb_Chr04g0263651 Lupinus albus HOM05D006006 ORTHO05D007566 4.8e-138 495.0 348 68.1
Nn5g28652 Nelumbo nucifera HOM05D006006 ORTHO05D007566 6.3e-138 494.6 345 67.8
DCAR_008158 Daucus carota HOM05D006006 ORTHO05D007566 1.8e-137 493.0 338 66.9
Oeu014478.2 Olea europaea HOM05D006006 ORTHO05D007566 1.8e-137 493.0 364 64.8
Carub.0001s2078 Capsella rubella HOM05D006006 ORTHO05D007566 4.1e-137 491.9 348 70.4
PSO675G8728 Papaver somniferum HOM05D006006 ORTHO05D007566 9.0e-137 490.7 339 68.1
arahy.Tifrunner.gnm1.ann1.D9Y8GI Arachis hypogaea HOM05D006006 ORTHO05D007566 4.5e-136 488.4 352 66.8
Ah.01g005030 Amaranthus hybridus HOM05D006006 ORTHO05D007566 1.0e-135 487.3 346 66.5
AT1G21370 Arabidopsis thaliana HOM05D006006 ORTHO05D007566 1.0e-135 487.3 350 70.6
PSO541G2188 Papaver somniferum HOM05D006006 ORTHO05D007566 1.3e-135 486.9 339 67.6
Sed0017044 Sechium edule HOM05D006006 ORTHO05D007566 1.3e-135 486.9 347 66.0
TWI60G1394 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 1.7e-135 486.5 345 67.5
Sp1g18920 Schrenkiella parvula HOM05D006006 ORTHO05D007566 2.2e-135 486.1 347 68.3
arahy.Tifrunner.gnm1.ann1.T5RWDG Arachis hypogaea HOM05D006006 ORTHO05D007566 6.5e-135 484.6 352 66.2
ATR1136G139 Amborella trichopoda HOM05D006006 ORTHO05D007566 8.5e-135 484.2 341 66.9
TWI34G1885 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 4.2e-134 481.9 339 67.6
MSTRG.24200 Avicennia marina HOM05D006006 ORTHO05D007566 5.5e-134 481.5 345 65.8
MELO3C023695.2 Cucumis melo HOM05D006006 ORTHO05D007566 9.3e-134 480.7 405 58.5
Lj1g0023019 Lotus japonicus HOM05D006006 ORTHO05D007566 1.2e-133 480.3 353 69.1
Lj4A692T31 Lonicera japonica HOM05D006006 ORTHO05D007566 3.6e-133 478.8 346 65.3
Aa31LG7G5530 Aethionema arabicum HOM05D006006 ORTHO05D007566 1.8e-132 476.5 347 66.9
CARHR021760 Cardamine hirsuta HOM05D006006 ORTHO05D007566 1.8e-132 476.5 350 68.3
Os04g0438500 Oryza sativa ssp. japonica HOM05D006006 ORTHO05D007566 3.9e-132 475.3 345 67.0
HanXRQChr04g0109001 Helianthus annuus HOM05D006006 ORTHO05D007566 8.8e-132 474.2 350 66.0
Medtr1g029000 Medicago truncatula HOM05D006006 ORTHO05D007566 8.8e-132 474.2 352 67.9
BcaB07g32125 Brassica carinata HOM05D006006 ORTHO05D007566 1.5e-131 473.4 334 68.6
VMungo0647G2124 Vigna mungo HOM05D006006 ORTHO05D007566 2.5e-131 472.6 329 68.7
BraA06t24839Z Brassica rapa HOM05D006006 ORTHO05D007566 7.4e-131 471.1 349 66.2
Zm00001eb422860 Zea mays HOM05D006006 ORTHO05D007566 2.2e-130 469.5 345 67.5
Cc10_g14250 Coffea canephora HOM05D006006 ORTHO05D007566 3.7e-130 468.8 328 68.0
BcaC05g26044 Brassica carinata HOM05D006006 ORTHO05D007566 8.2e-130 467.6 350 65.1
Psat0s5561g0040 Pisum sativum HOM05D006006 ORTHO05D007566 8.2e-130 467.6 350 67.1
A06p17420 Brassica napus HOM05D006006 ORTHO05D007566 1.1e-129 467.2 347 65.7
Ca_12665_v3 Cicer arietinum L. HOM05D006006 ORTHO05D007566 1.8e-129 466.5 348 67.2
C05p20260 Brassica napus HOM05D006006 ORTHO05D007566 2.4e-129 466.1 350 65.1
BolC5t30719H Brassica oleracea HOM05D006006 ORTHO05D007566 2.4e-129 466.1 350 65.1
HanXRQChr08g0217661 Helianthus annuus HOM05D006006 ORTHO05D007566 2.4e-129 466.1 357 65.5
Migut.N03230 Erythranthe guttata HOM05D006006 ORTHO05D007566 3.1e-129 465.7 348 66.7
TPR.G33300 Trifolium pratense HOM05D006006 ORTHO05D007566 7.7e-128 461.1 343 67.1
unitig_21.g20180 Utricularia gibba HOM05D006006 ORTHO05D007566 1.3e-127 460.3 343 63.3
AL1G34470 Arabidopsis lyrata HOM05D006006 ORTHO05D007566 2.5e-126 456.1 301 72.4
unitig_744.g24565 Utricularia gibba HOM05D006006 ORTHO05D007566 7.2e-126 454.5 345 62.6
BcaB03g12819 Brassica carinata HOM05D006006 ORTHO05D007566 4.7e-125 451.8 347 64.0
HPP92_004629 Vanilla planifolia HOM05D006006 ORTHO05D007566 7.9e-125 451.1 345 61.7
Lsat_1_v5_gn_1_8980 Lactuca sativa HOM05D006006 ORTHO05D007566 6.7e-124 448.0 292 70.5
C08p20770 Brassica napus HOM05D006006 ORTHO05D007566 2.8e-122 442.6 324 65.7
Actinidia15154 Actinidia chinensis HOM05D006006 ORTHO05D007566 3.1e-121 439.1 299 70.6
SHI09110 Sapria himalayana HOM05D006006 ORTHO05D007566 3.0e-116 422.5 336 62.8
CDE06G2625 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 2.0e-112 409.8 249 74.7
CDE08G1689 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 1.7e-111 406.8 249 74.3
Peaxi162Scf00051g00516 Petunia axillaris HOM05D006006 ORTHO05D007566 1.7e-111 406.8 234 78.2
BolC8t49716H Brassica oleracea HOM05D006006 ORTHO05D007566 7.2e-110 401.4 325 61.2
ECA247G2705 Erigeron canadensis HOM05D006006 ORTHO05D007566 1.6e-109 400.2 244 75.4
Mapoly0050s0105 Marchantia polymorpha HOM05D006006 ORTHO05D007566 7.7e-104 381.3 308 60.7
Dinv25817 Davidia involucrata HOM05D006006 ORTHO05D007566 1.7e-103 380.2 252 71.0
SEGI_37970 Sequoiadendron giganteum HOM05D006006 ORTHO05D007566 8.0e-101 371.3 330 57.9
Pp3c25_12020 Physcomitrium patens HOM05D006006 ORTHO05D007566 7.7e-96 354.8 329 55.9
BcaC07g39093 Brassica carinata HOM05D006006 ORTHO05D007566 1.9e-94 350.1 325 56.6
Sc02g0004370 Simmondsia chinensis HOM05D006006 ORTHO05D007566 8.0e-93 344.7 241 68.0
C06p40100 Brassica napus HOM05D006006 ORTHO05D007566 4.4e-91 339.0 232 69.0
Nitab4.5_0008475g0010 Nicotiana tabacum HOM05D006006 ORTHO05D007566 1.7e-90 337.0 240 67.5
Gohir.A02G108508 Gossypium hirsutum HOM05D006006 ORTHO05D007566 5.9e-88 328.6 248 66.1
Gohir.A02G108509 Gossypium hirsutum HOM05D006006 ORTHO05D007566 5.9e-88 328.6 248 66.1
SMO228G0011 Selaginella moellendorffii HOM05D006006 ORTHO05D007566 8.6e-87 324.7 244 62.3
Pp3c6_4630 Physcomitrium patens HOM05D006006 ORTHO05D007566 1.5e-86 323.9 328 54.3
SGA_v2.0_scaffold25G11170 Striga asiatica HOM05D006006 ORTHO05D007566 2.8e-85 319.7 240 63.3
AagrBONN_evm.TU.Sc2ySwM_344.2333 Anthoceros agrestis HOM05D006006 ORTHO05D007566 3.1e-68 263.1 173 70.5
AUR62025132 Chenopodium quinoa HOM05D006006 ORTHO05D007566 4.1e-65 252.7 200 59.0
AUR62037127 Chenopodium quinoa HOM05D006006 ORTHO05D007566 1.0e-63 248.1 200 58.5
MCO04G174 Micromonas commoda HOM05D006006 ORTHO05D007566 1.6e-61 240.7 246 47.6
TAR625G0955 Trochodendron aralioides HOM05D006006 ORTHO05D007566 1.7e-55 220.7 163 63.2
PRCOL_00006391 Prasinoderma coloniale HOM05D006006 ORTHO05D007566 3.1e-52 209.9 197 50.8
Cre02.g116000 Chlamydomonas reinhardtii HOM05D006006 ORTHO05D007566 1.1e-49 201.4 180 55.0
Pp3c5_24650 Physcomitrium patens HOM05D006006 ORTHO05D007566 2.7e-48 196.8 161 62.7
SGA_v2.0_scaffold35G14089 Striga asiatica HOM05D006006 ORTHO05D007566 1.2e-27 128.3 79 73.4
Ah.02g110550 Amaranthus hybridus HOM05D006006 ORTHO05D007566 7.6e-27 125.6 73 79.5
CDE04G1521 Ceratophyllum demersum HOM05D000566 ORTHO05D000686 1.1e-17 95.1 57 70.2
Pp3c16_22840 Physcomitrium patens HOM05D006006 ORTHO05D318415 3.2e-09 67.0 92 40.2


User provided reference genes

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