Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3347 Cannabis sativa HOM05D007841 ORTHO05D009919 6.1e-32 140.2 70 100.0
CANSAT25G3825 Cannabis sativa HOM05D007841 ORTHO05D009919 6.1e-32 140.2 70 100.0
Duzib138G1421 Durio zibethinus HOM05D007841 ORTHO05D009919 4.5e-27 124.0 65 92.3
Atru.chr5.91 Acer truncatum HOM05D007841 ORTHO05D009919 7.7e-27 123.2 65 93.8
Gohir.D12G101400 Gossypium hirsutum HOM05D007841 ORTHO05D009919 1.7e-26 122.1 65 90.8
Gorai.008G110500 Gossypium raimondii HOM05D007841 ORTHO05D009919 1.7e-26 122.1 65 90.8
Medtr7g050540 Medicago truncatula HOM05D007841 ORTHO05D009919 1.7e-26 122.1 65 93.8
HanXRQChr01g0019691 Helianthus annuus HOM05D007841 ORTHO05D009919 3.8e-26 120.9 65 90.8
Prupe.2G120100 Prunus persica HOM05D007841 ORTHO05D009919 3.8e-26 120.9 65 89.2
Psat3g152880 Pisum sativum HOM05D007841 ORTHO05D009919 5.0e-26 120.6 65 92.3
Phvul.008G138900 Phaseolus vulgaris HOM05D007841 ORTHO05D009919 6.5e-26 120.2 65 90.8
Lalb_Chr03g0040951 Lupinus albus HOM05D007841 ORTHO05D009919 8.5e-26 119.8 65 90.8
PSO675G0834 Papaver somniferum HOM05D007841 ORTHO05D009919 8.5e-26 119.8 70 87.1
Hma1.2p1_2138F.1_g314930 Hydrangea macrophylla HOM05D007841 ORTHO05D009919 1.1e-25 119.4 65 89.2
Lj1g0014858 Lotus japonicus HOM05D007841 ORTHO05D009919 1.1e-25 119.4 72 88.9
arahy.Tifrunner.gnm1.ann1.K94MSK Arachis hypogaea HOM05D007841 ORTHO05D009919 1.4e-25 119.0 64 90.6
Gohir.A12G098200 Gossypium hirsutum HOM05D007841 ORTHO05D009919 1.4e-25 119.0 65 87.7
THA.LOC104814059 Tarenaya hassleriana HOM05D007841 ORTHO05D009919 1.4e-25 119.0 64 90.6
PGR004G1954 Punica granatum HOM05D007841 ORTHO05D009919 1.9e-25 118.6 69 87.0
Actinidia30942 Actinidia chinensis HOM05D007841 ORTHO05D009919 2.5e-25 118.2 73 82.2
CsaV3_3G010620 Cucumis sativus L. HOM05D007841 ORTHO05D009919 3.2e-25 117.9 67 86.6
ECA248G0141 Erigeron canadensis HOM05D007841 ORTHO05D009919 3.2e-25 117.9 65 89.2
Oeu034848.1 Olea europaea HOM05D007841 ORTHO05D009919 3.2e-25 117.9 65 87.7
BcaB03g13636 Brassica carinata HOM05D000300 ORTHO05D000383 4.2e-25 117.5 64 89.1
Glyma.08G340600 Glycine max HOM05D007841 ORTHO05D009919 4.2e-25 117.5 72 86.1
PSO732G0215 Papaver somniferum HOM05D007841 ORTHO05D009919 4.2e-25 117.5 64 90.6
AL1G10060 Arabidopsis lyrata HOM05D007841 ORTHO05D009919 5.5e-25 117.1 64 89.1
AT1G02160 Arabidopsis thaliana HOM05D007841 ORTHO05D009919 5.5e-25 117.1 64 89.1
Carub.0001s0004 Capsella rubella HOM05D007841 ORTHO05D009919 5.5e-25 117.1 64 89.1
Thhalv10009237m.g Eutrema salsugineum HOM05D007841 ORTHO05D009919 5.5e-25 117.1 64 89.1
Lsat_1_v5_gn_1_83981 Lactuca sativa HOM05D007841 ORTHO05D009919 7.2e-25 116.7 65 87.7
Sed0011386 Sechium edule HOM05D007841 ORTHO05D009919 7.2e-25 116.7 65 87.7
EL10Ac1g00736 Beta vulgaris HOM05D007841 ORTHO05D009919 9.4e-25 116.3 65 86.2
CAN.G756.38 Capsicum annuum HOM05D007841 ORTHO05D009919 1.2e-24 115.9 64 85.9
CiPaw.14G018000 Carya illinoinensis HOM05D007841 ORTHO05D009919 1.2e-24 115.9 69 84.1
Solyc01g088770.3 Solanum lycopersicum HOM05D007841 ORTHO05D009919 1.2e-24 115.9 65 83.1
Sopen01g035610 Solanum pennellii HOM05D007841 ORTHO05D009919 1.2e-24 115.9 65 83.1
PGSC0003DMG400001726 Solanum tuberosum HOM05D007841 ORTHO05D009919 1.2e-24 115.9 65 83.1
C05p00040 Brassica napus HOM05D007841 ORTHO05D009919 1.6e-24 115.5 64 87.5
BolC5t28791H Brassica oleracea HOM05D007841 ORTHO05D009919 1.6e-24 115.5 64 87.5
CARHR000160 Cardamine hirsuta HOM05D007841 ORTHO05D009919 1.6e-24 115.5 69 84.1
Cc02_g25410 Coffea canephora HOM05D007841 ORTHO05D009919 1.6e-24 115.5 65 84.6
Aqoxy7G00835 Aquilegia oxysepala HOM05D007841 ORTHO05D009919 2.1e-24 115.2 65 87.7
Eucgr.D01199 Eucalyptus grandis HOM05D007841 ORTHO05D009919 3.6e-24 114.4 69 85.5
ClCG05G003010 Citrullus lanatus HOM05D007841 ORTHO05D009919 4.7e-24 114.0 67 83.6
COL.COLO4_12370 Corchorus olitorius HOM05D007841 ORTHO05D009919 6.1e-24 113.6 65 84.6
Potri.014G051850 Populus trichocarpa HOM05D007841 ORTHO05D009919 6.1e-24 113.6 65 84.6
RcHm_v2.0_Chr1g0345181 Rosa chinensis HOM05D007841 ORTHO05D009919 6.1e-24 113.6 69 84.1
Thecc.01G400700 Theobroma cacao HOM05D007841 ORTHO05D009919 7.9e-24 113.2 70 84.3
MD02G1221100 Malus domestica HOM05D007841 ORTHO05D009919 1.0e-23 112.8 69 82.6
MD07G1096500 Malus domestica HOM05D007841 ORTHO05D009919 1.8e-23 112.1 69 85.5
Manes.05G057100 Manihot esculenta HOM05D007841 ORTHO05D009919 3.0e-23 111.3 59 89.8
Migut.N01723 Erythranthe guttata HOM05D007841 ORTHO05D009919 4.4e-22 107.5 64 81.2
Zm00001eb067220 Zea mays HOM05D007841 ORTHO05D009919 1.7e-21 105.5 70 78.6
FvH4_7g09140 Fragaria vesca HOM05D007841 ORTHO05D009919 1.1e-20 102.8 69 79.7
Os04g0665000 Oryza sativa ssp. japonica HOM05D007841 ORTHO05D009919 9.1e-20 99.8 69 76.8
Haze_02887 Corylus avellana HOM05D000061 ORTHO05D000915 3.4e-19 97.8 57 82.5
unitig_22.g6702 Utricularia gibba HOM05D007841 ORTHO05D009919 3.4e-19 97.8 64 73.4
Hund17114 Selenicereus undatus HOM05D007841 ORTHO05D009919 1.3e-18 95.9 49 87.8
arahy.Tifrunner.gnm1.ann1.X5EUJ4 Arachis hypogaea HOM05D007841 ORTHO05D009919 1.7e-18 95.5 49 91.8
GSVIVG01018320001 Vitis vinifera HOM05D007841 ORTHO05D009919 1.7e-18 95.5 65 72.3
FAN06G3108 Fragaria x ananassa HOM05D007841 ORTHO05D009919 2.9e-18 94.7 64 78.1
Ciclev10023064m.g Citrus clementina HOM05D007841 ORTHO05D009919 3.8e-18 94.4 53 86.8
Nitab4.5_0004425g0050 Nicotiana tabacum HOM05D007841 ORTHO05D009919 5.0e-18 94.0 56 78.6
PSO732G0130 Papaver somniferum HOM05D007841 ORTHO05D009919 8.5e-18 93.2 53 84.9
SalBow4G0679 Salvia bowleyana HOM05D007841 ORTHO05D009919 3.2e-17 91.3 49 83.7
Peaxi162Scf00793g00363 Petunia axillaris HOM05D007841 ORTHO05D009919 4.2e-17 90.9 49 83.7
Sc02g0003210 Simmondsia chinensis HOM05D007841 ORTHO05D009919 4.2e-17 90.9 53 81.1
BraA10t42285Z Brassica rapa HOM05D007841 ORTHO05D009919 7.2e-17 90.1 48 85.4
Sp1g00090 Schrenkiella parvula HOM05D007841 ORTHO05D009919 9.4e-17 89.7 48 85.4
Nn6g33742 Nelumbo nucifera HOM05D007841 ORTHO05D009919 1.2e-16 89.4 49 81.6
CSS0006405 Camellia sinensis var. sinensis HOM05D007841 ORTHO05D009919 1.0e-15 86.3 49 79.6
AUR62013771 Chenopodium quinoa HOM05D007841 ORTHO05D009919 1.1e-14 82.8 49 79.6
AUR62023385 Chenopodium quinoa HOM05D007841 ORTHO05D009919 1.1e-14 82.8 49 79.6
FAN01G1055 Fragaria x ananassa HOM05D007841 ORTHO05D009919 5.7e-14 80.5 67 68.7
FAN03G2201 Fragaria x ananassa HOM05D007841 ORTHO05D009919 5.7e-14 80.5 67 68.7
Pp3c22_2080 Physcomitrium patens HOM05D007841 ORTHO05D009919 5.7e-14 80.5 64 62.5
Aa31LG1G11570 Aethionema arabicum HOM05D007841 ORTHO05D009919 1.7e-13 79.0 48 81.2
Sabra14G0036700 Salix brachista HOM05D007841 ORTHO05D009919 3.7e-13 77.8 41 92.7
TAR375G0262 Trochodendron aralioides HOM05D006103 ORTHO05D007468 7.0e-12 73.6 45 82.2
AagrBONN_evm.TU.Sc2ySwM_228.3132 Anthoceros agrestis HOM05D007841 ORTHO05D009919 1.7e-10 68.9 53 62.3
Mapoly0181s0011 Marchantia polymorpha HOM05D007841 ORTHO05D009919 5.0e-10 67.4 64 51.6
Actinidia05779 Actinidia chinensis HOM05D007841 ORTHO05D009919 6.5e-10 67.0 33 87.9
CAN.G756.35 Capsicum annuum HOM05D007841 ORTHO05D009919 4.2e-09 64.3 36 86.1
CANSAT54G2157 Cannabis sativa HOM05D007841 ORTHO05D113685 7.5e-06 53.5 30 83.3


User provided reference genes

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