Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G2510 Cannabis sativa HOM05D004842 ORTHO05D005929 1.7e-248 862.4 514 100.0
Cfa008117 Carpinus fangiana HOM05D004842 ORTHO05D005929 8.7e-237 823.5 514 94.9
CsaV3_2G033060 Cucumis sativus L. HOM05D004842 ORTHO05D005929 3.3e-236 821.6 514 90.3
CiPaw.03G017600 Carya illinoinensis HOM05D004842 ORTHO05D005929 1.2e-233 813.1 514 94.0
Cpa.g.sc20.22 Carica papaya HOM05D004842 ORTHO05D005929 5.9e-233 810.8 512 92.8
Gohir.A13G118200 Gossypium hirsutum HOM05D004842 ORTHO05D005929 1.0e-232 810.1 510 91.4
PGR031G3502 Punica granatum HOM05D004842 ORTHO05D005929 1.0e-232 810.1 511 90.0
Hma1.2p1_0150F.1_g066770 Hydrangea macrophylla HOM05D004842 ORTHO05D005929 1.3e-232 809.7 514 89.1
Duzib177G0537 Durio zibethinus HOM05D004842 ORTHO05D005929 6.5e-232 807.4 510 90.2
Sed0014706 Sechium edule HOM05D004842 ORTHO05D005929 6.5e-232 807.4 514 89.5
Thecc.08G195800 Theobroma cacao HOM05D004842 ORTHO05D005929 6.5e-232 807.4 510 90.4
Gohir.D13G122000 Gossypium hirsutum HOM05D004842 ORTHO05D005929 8.5e-232 807.0 510 93.7
Gorai.013G136700 Gossypium raimondii HOM05D004842 ORTHO05D005929 8.5e-232 807.0 510 94.1
Dinv33198 Davidia involucrata HOM05D004842 ORTHO05D005929 3.6e-230 801.6 514 92.2
ClCG11G008790 Citrullus lanatus HOM05D004842 ORTHO05D005929 4.6e-230 801.2 509 88.2
Potri.011G156900 Populus trichocarpa HOM05D004842 ORTHO05D005929 4.6e-230 801.2 511 92.2
Sabra11G0143100 Salix brachista HOM05D004842 ORTHO05D005929 1.0e-229 800.0 511 92.2
Phvul.002G251300 Phaseolus vulgaris HOM05D004842 ORTHO05D005929 1.4e-229 799.7 514 91.6
Medtr3g052220 Medicago truncatula HOM05D004842 ORTHO05D005929 3.0e-229 798.5 514 90.9
Glyma.08G128700 Glycine max HOM05D004842 ORTHO05D005929 3.9e-229 798.1 514 91.6
MD08G1215900 Malus domestica HOM05D004842 ORTHO05D005929 6.7e-229 797.3 514 90.7
Nn1g01353 Nelumbo nucifera HOM05D004842 ORTHO05D005929 1.5e-228 796.2 514 91.6
Psat5g178560 Pisum sativum HOM05D004842 ORTHO05D005929 1.5e-228 796.2 514 91.2
RcHm_v2.0_Chr7g0230731 Rosa chinensis HOM05D004842 ORTHO05D005929 1.5e-228 796.2 514 88.5
CSS0028462 Camellia sinensis var. sinensis HOM05D004842 ORTHO05D005929 2.0e-228 795.8 514 91.1
AUR62006879 Chenopodium quinoa HOM05D004842 ORTHO05D005929 5.7e-228 794.3 514 87.2
GSVIVG01007685001 Vitis vinifera HOM05D004842 ORTHO05D005929 9.7e-228 793.5 513 91.4
FvH4_5g32860 Fragaria vesca HOM05D004842 ORTHO05D005929 1.3e-227 793.1 514 88.1
FAN18G3613 Fragaria x ananassa HOM05D004842 ORTHO05D005929 1.3e-227 793.1 514 88.1
Atru.chr13.2273 Acer truncatum HOM05D004842 ORTHO05D005929 2.2e-227 792.3 512 92.0
Ca_21945_v3 Cicer arietinum L. HOM05D004842 ORTHO05D005929 2.2e-227 792.3 514 91.1
PGSC0003DMG400005186 Solanum tuberosum HOM05D004842 ORTHO05D005929 2.8e-227 792.0 513 91.0
Actinidia01552 Actinidia chinensis HOM05D004842 ORTHO05D005929 4.8e-227 791.2 514 90.9
Solyc06g064830.3 Solanum lycopersicum HOM05D004842 ORTHO05D005929 4.8e-227 791.2 513 91.0
MSTRG.1576 Avicennia marina HOM05D004842 ORTHO05D005929 6.3e-227 790.8 513 90.6
Sopen06g023340 Solanum pennellii HOM05D004842 ORTHO05D005929 1.1e-226 790.0 513 90.8
Eucgr.E01768 Eucalyptus grandis HOM05D004842 ORTHO05D005929 1.8e-226 789.3 511 91.8
Lj9C410G7 Lonicera japonica HOM05D004842 ORTHO05D005929 1.8e-226 789.3 514 91.6
Lalb_Chr11g0075451 Lupinus albus HOM05D004842 ORTHO05D005929 2.4e-226 788.9 513 90.6
Sp5g28910 Schrenkiella parvula HOM05D004842 ORTHO05D005929 9.1e-226 786.9 511 86.9
Cc10_g16460 Coffea canephora HOM05D004842 ORTHO05D005929 1.2e-225 786.6 513 90.6
TAR374G0778 Trochodendron aralioides HOM05D004842 ORTHO05D005929 2.0e-225 785.8 514 89.9
Lj6g0012354 Lotus japonicus HOM05D004842 ORTHO05D005929 3.4e-225 785.0 514 90.3
CDE03G0432 Ceratophyllum demersum HOM05D004842 ORTHO05D005929 5.9e-225 784.3 514 89.9
TWI14G0987 Tripterygium wilfordii HOM05D004842 ORTHO05D005929 7.7e-225 783.9 512 90.8
QL09p004408 Quercus lobata HOM05D004842 ORTHO05D005929 1.0e-224 783.5 513 87.1
Aqoxy7G00451 Aquilegia oxysepala HOM05D004842 ORTHO05D005929 2.2e-224 782.3 512 90.4
CDE04G2825 Ceratophyllum demersum HOM05D004842 ORTHO05D005929 2.2e-224 782.3 514 89.9
Prupe.1G547900 Prunus persica HOM05D004842 ORTHO05D005929 2.2e-224 782.3 514 89.1
THA.LOC104813908 Tarenaya hassleriana HOM05D004842 ORTHO05D005929 2.2e-224 782.3 512 90.2
VMungo0251G2201 Vigna mungo HOM05D004842 ORTHO05D005929 2.9e-224 781.9 504 91.3
Aa31LG7G3010 Aethionema arabicum HOM05D004842 ORTHO05D005929 1.1e-223 780.0 511 90.0
FAN04G0777 Fragaria x ananassa HOM05D004842 ORTHO05D005929 1.4e-223 779.6 542 83.8
BcaB03g15725 Brassica carinata HOM05D004842 ORTHO05D005929 3.2e-223 778.5 511 85.7
DCAR_005757 Daucus carota HOM05D004842 ORTHO05D005929 7.2e-223 777.3 514 89.7
HPP92_002632 Vanilla planifolia HOM05D004842 ORTHO05D005929 1.2e-222 776.5 514 88.7
HanXRQChr04g0123031 Helianthus annuus HOM05D004842 ORTHO05D005929 2.1e-222 775.8 514 87.9
Glyma.05G170500 Glycine max HOM05D004842 ORTHO05D005929 2.7e-222 775.4 514 90.1
COL.COLO4_26800 Corchorus olitorius HOM05D004842 ORTHO05D005929 3.6e-222 775.0 535 83.7
ECA232G0634 Erigeron canadensis HOM05D004842 ORTHO05D005929 4.7e-222 774.6 514 87.7
MD15G1400300 Malus domestica HOM05D004842 ORTHO05D005929 6.1e-222 774.2 514 90.5
Hund07225 Selenicereus undatus HOM05D004842 ORTHO05D005929 1.8e-221 772.7 514 88.7
SalBow8G3404 Salvia bowleyana HOM05D004842 ORTHO05D005929 2.3e-221 772.3 536 86.4
Carub.0002s2047 Capsella rubella HOM05D004842 ORTHO05D005929 5.1e-221 771.2 511 87.3
Ciclev10010841m.g Citrus clementina HOM05D004842 ORTHO05D005929 5.1e-221 771.2 512 90.6
SGA_v2.0_scaffold24G10617 Striga asiatica HOM05D004842 ORTHO05D005929 6.7e-221 770.8 527 79.9
Thhalv10018372m.g Eutrema salsugineum HOM05D004842 ORTHO05D005929 8.8e-221 770.4 511 87.7
Nitab4.5_0006477g0030 Nicotiana tabacum HOM05D004842 ORTHO05D005929 1.1e-220 770.0 504 90.9
HanXRQChr15g0492161 Helianthus annuus HOM05D004842 ORTHO05D005929 1.5e-220 769.6 514 87.2
Migut.C01340 Erythranthe guttata HOM05D004842 ORTHO05D005929 2.6e-220 768.8 513 89.3
Lsat_1_v5_gn_0_10701 Lactuca sativa HOM05D004842 ORTHO05D005929 2.6e-220 768.8 514 88.1
CARHR066790 Cardamine hirsuta HOM05D004842 ORTHO05D005929 4.4e-220 768.1 511 84.1
FAN08G0446 Fragaria x ananassa HOM05D004842 ORTHO05D005929 4.4e-220 768.1 514 86.8
PSO478G2485 Papaver somniferum HOM05D004842 ORTHO05D005929 6.3e-219 764.2 514 88.7
PSO782G1233 Papaver somniferum HOM05D004842 ORTHO05D005929 8.2e-219 763.8 514 88.5
ATR0757G167 Amborella trichopoda HOM05D004842 ORTHO05D005929 1.4e-218 763.1 514 89.1
A07p39580 Brassica napus HOM05D004842 ORTHO05D005929 3.1e-218 761.9 511 87.5
MSTRG.25488 Avicennia marina HOM05D004842 ORTHO05D005929 4.1e-218 761.5 513 87.9
arahy.Tifrunner.gnm1.ann1.907RVD Arachis hypogaea HOM05D004842 ORTHO05D005929 1.5e-217 759.6 514 88.9
Os01g0322800 Oryza sativa ssp. japonica HOM05D004842 ORTHO05D005929 1.5e-217 759.6 513 86.2
SHI07326 Sapria himalayana HOM05D004842 ORTHO05D005929 1.5e-217 759.6 515 87.2
C06p47870 Brassica napus HOM05D004842 ORTHO05D005929 2.6e-217 758.8 509 87.4
BolC6t39822H Brassica oleracea HOM05D004842 ORTHO05D005929 2.6e-217 758.8 509 87.4
BcaB03g15078 Brassica carinata HOM05D004842 ORTHO05D005929 5.9e-217 757.7 511 87.1
Rhsim12G0003800 Rhododendron simsii HOM05D004842 ORTHO05D005929 2.9e-216 755.4 504 87.7
SGA_v2.0_scaffold118G32576 Striga asiatica HOM05D004842 ORTHO05D005929 2.9e-216 755.4 504 88.9
AL2G33520 Arabidopsis lyrata HOM05D004842 ORTHO05D005929 1.6e-214 749.6 500 86.6
MBI04_g37683_MAGBIO Magnolia biondii HOM05D004842 ORTHO05D005929 4.8e-211 738.0 507 86.2
Mapoly0044s0021 Marchantia polymorpha HOM05D004842 ORTHO05D005929 8.2e-211 737.3 514 85.0
BraA07t31507Z Brassica rapa HOM05D004842 ORTHO05D005929 2.0e-209 732.6 520 84.4
Nitab4.5_0006564g0010 Nicotiana tabacum HOM05D004842 ORTHO05D005929 6.5e-208 727.6 485 89.9
Dinv07060 Davidia involucrata HOM05D004842 ORTHO05D005929 1.5e-207 726.5 514 77.2
arahy.Tifrunner.gnm1.ann1.VU3SB5 Arachis hypogaea HOM05D004842 ORTHO05D005929 2.1e-206 722.6 535 80.4
AUR62000532 Chenopodium quinoa HOM05D004842 ORTHO05D005929 4.7e-206 721.5 514 77.6
Nitab4.5_0001799g0050 Nicotiana tabacum HOM05D004842 ORTHO05D005929 8.0e-206 720.7 509 86.4
AT1G73720 Arabidopsis thaliana HOM05D004842 ORTHO05D005929 3.0e-205 718.8 511 84.3
CANSAT21G1785 Cannabis sativa HOM05D004842 ORTHO05D005929 7.5e-204 714.1 525 84.0
unitig_748.g7731 Utricularia gibba HOM05D004842 ORTHO05D005929 8.5e-200 700.7 551 71.9
Peaxi162Scf00688g00227 Petunia axillaris HOM05D004842 ORTHO05D005929 1.5e-199 699.9 484 88.2
Pp3c7_2610 Physcomitrium patens HOM05D004842 ORTHO05D005929 7.2e-199 697.6 514 80.7
Pp3c11_23660 Physcomitrium patens HOM05D004842 ORTHO05D005929 2.7e-198 695.7 514 78.4
CBR_g5735 Chara braunii HOM05D004842 ORTHO05D005929 3.6e-198 695.3 514 80.7
AagrBONN_evm.TU.Sc2ySwM_369.510 Anthoceros agrestis HOM05D004842 ORTHO05D005929 1.8e-197 693.0 557 75.2
Sc20g0002260 Simmondsia chinensis HOM05D004842 ORTHO05D005929 1.4e-194 683.3 468 90.2
TAR375G0910 Trochodendron aralioides HOM05D004842 ORTHO05D005929 2.0e-193 679.5 464 90.5
SMO119G0417 Selaginella moellendorffii HOM05D004842 ORTHO05D005929 2.8e-190 669.1 511 71.4
Nitab4.5_0000748g0110 Nicotiana tabacum HOM05D004842 ORTHO05D005929 1.8e-186 656.4 513 81.3
Manes.01G021200 Manihot esculenta HOM05D004842 ORTHO05D005929 3.3e-183 645.6 430 91.9
vmacro00929 Vaccinium macrocarpon HOM05D004842 ORTHO05D005929 1.7e-179 633.3 435 86.9
COL.COLO4_24626 Corchorus olitorius HOM05D004842 ORTHO05D005929 4.6e-177 625.2 428 88.3
BcaC08g46793 Brassica carinata HOM05D004842 ORTHO05D005929 8.6e-168 594.3 511 73.4
SEGI_07677 Sequoiadendron giganteum HOM05D004842 ORTHO05D005929 8.9e-157 557.8 414 85.0
Cre01.g020400 Chlamydomonas reinhardtii HOM05D004842 ORTHO05D005929 2.3e-152 543.1 511 65.9
EL10Ac4g09640 Beta vulgaris HOM05D004842 ORTHO05D005929 2.4e-138 496.5 269 90.3
TPR.G33753 Trifolium pratense HOM05D004842 ORTHO05D005929 4.3e-135 485.7 254 95.3
Hma1.2p1_1698F.1_g298123 Hydrangea macrophylla HOM05D004842 ORTHO05D005929 8.7e-128 461.5 322 86.3
Zm00001eb130810 Zea mays HOM05D004842 ORTHO05D005929 7.6e-124 448.4 312 81.4
EL10Ac4g09644 Beta vulgaris HOM05D004842 ORTHO05D005929 3.0e-112 409.8 385 60.0
arahy.Tifrunner.gnm1.ann1.6AWP8P Arachis hypogaea HOM05D004842 ORTHO05D005929 6.5e-107 392.1 210 94.8
arahy.Tifrunner.gnm1.ann1.UIX0GM Arachis hypogaea HOM05D004842 ORTHO05D005929 1.4e-106 391.0 210 94.3
Lj9C233G3 Lonicera japonica HOM05D004842 ORTHO05D005929 3.5e-92 343.2 365 73.2
Actinidia15960 Actinidia chinensis HOM05D004842 ORTHO05D005929 7.0e-77 292.4 257 76.7
PRCOL_00002301 Prasinoderma coloniale HOM05D004842 ORTHO05D005929 4.5e-76 289.7 518 48.6
EL10Ac4g09638 Beta vulgaris HOM05D004842 ORTHO05D005929 1.2e-73 281.6 206 80.6
Haze_13915 Corylus avellana HOM05D004842 ORTHO05D005929 1.6e-65 254.6 134 97.8
C06p33880 Brassica napus HOM05D004842 ORTHO05D005929 3.1e-64 250.4 526 36.3
PSO384G0554 Papaver somniferum HOM05D004842 ORTHO05D005929 4.6e-44 183.3 99 83.8
Haze_27333 Corylus avellana HOM05D004842 ORTHO05D005929 1.7e-43 181.4 253 39.5
Ca_03946_v3 Cicer arietinum L. HOM05D004842 ORTHO05D005929 4.7e-41 173.3 149 60.4
Cpa.g.c40110 Carica papaya HOM05D004842 ORTHO05D005929 3.8e-38 163.7 80 92.5
SEGI_19922 Sequoiadendron giganteum HOM05D004842 ORTHO05D005929 4.3e-34 150.2 80 92.5
BolC2t07949H Brassica oleracea HOM05D004842 ORTHO05D005929 1.6e-33 148.3 137 63.5
RcHm_v2.0_Chr6g0269341 Rosa chinensis HOM05D004842 ORTHO05D005929 2.8e-33 147.5 107 73.8
Sabra16G0312200 Salix brachista HOM05D004842 ORTHO05D005929 2.4e-32 144.4 178 51.1
AL6G46370 Arabidopsis lyrata HOM05D004842 ORTHO05D005929 5.3e-32 143.3 295 31.9
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 9.3e-29 132.5 70 91.4
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 5.1e-27 126.7 69 88.4
C05p58610 Brassica napus HOM05D004842 ORTHO05D009094 4.3e-26 123.6 64 89.1
BolC4t22950H Brassica oleracea HOM05D004842 ORTHO05D005929 4.3e-26 123.6 64 89.1
Duzib211G0352 Durio zibethinus HOM05D004842 ORTHO05D005929 1.2e-20 105.5 56 83.9
BolC6t38501H Brassica oleracea HOM05D004842 ORTHO05D005929 3.9e-19 100.5 56 76.8
Glyma.04G106300 Glycine max HOM05D004842 ORTHO05D005929 3.9e-19 100.5 100 54.0
Glyma.04G149500 Glycine max HOM05D004842 ORTHO05D005929 3.9e-19 100.5 100 54.0
TPR.G15252 Trifolium pratense HOM05D004842 ORTHO05D005929 1.3e-17 95.5 47 91.5
Actinidia15959 Actinidia chinensis HOM05D004842 ORTHO05D005929 2.4e-16 91.3 47 97.9
TPR.G33759 Trifolium pratense HOM05D004842 ORTHO05D005929 1.9e-13 81.6 134 73.9
ECA238G3245 Erigeron canadensis HOM05D000757 ORTHO05D000622 3.2e-13 80.9 41 85.4
Sed0018019 Sechium edule HOM05D004842 ORTHO05D005929 3.5e-12 77.4 105 43.8
Actinidia15961 Actinidia chinensis HOM05D004842 ORTHO05D005929 6.0e-12 76.6 122 39.3
ECA248G1356 Erigeron canadensis HOM05D006056 ORTHO05D007136 6.0e-12 76.6 41 80.5
Cfa012955 Carpinus fangiana HOM05D002874 ORTHO05D003250 3.9e-11 73.9 36 86.1
C04p47590 Brassica napus HOM05D007212 ORTHO05D009094 1.5e-07 62.0 35 77.1
TPR.G36494 Trifolium pratense HOM05D009291 ORTHO05D010716 1.3e-06 58.9 29 82.8
Actinidia23032 Actinidia chinensis HOM05D004842 ORTHO05D008384 8.5e-06 56.2 74 51.4


User provided reference genes

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