Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G0323 Cannabis sativa HOM05D003952 ORTHO05D005083 0.0e+00 2247.6 1171 100.0
Prupe.8G040600 Prunus persica HOM05D003952 ORTHO05D005083 0.0e+00 1867.4 1174 83.3
QL02p037499 Quercus lobata HOM05D003952 ORTHO05D005083 0.0e+00 1856.3 1172 82.1
MD10G1034200 Malus domestica HOM05D003952 ORTHO05D005083 0.0e+00 1855.5 1174 82.6
RcHm_v2.0_Chr6g0274251 Rosa chinensis HOM05D003952 ORTHO05D005083 0.0e+00 1855.1 1181 81.9
QL02p038017 Quercus lobata HOM05D003952 ORTHO05D005083 0.0e+00 1854.0 1172 82.0
Haze_17805 Corylus avellana HOM05D003952 ORTHO05D005083 0.0e+00 1853.2 1176 82.1
Cfa018280 Carpinus fangiana HOM05D003952 ORTHO05D005083 0.0e+00 1852.4 1176 82.1
Thecc.08G159400 Theobroma cacao HOM05D003952 ORTHO05D005083 0.0e+00 1846.2 1170 82.6
FvH4_2g13030 Fragaria vesca HOM05D003952 ORTHO05D005083 0.0e+00 1842.0 1181 82.1
Potri.002G064400 Populus trichocarpa HOM05D003952 ORTHO05D005083 0.0e+00 1837.8 1174 82.2
MD05G1033400 Malus domestica HOM05D003952 ORTHO05D005083 0.0e+00 1837.4 1174 81.9
Duzib093G1052 Durio zibethinus HOM05D003952 ORTHO05D005083 0.0e+00 1831.2 1169 82.0
Potri.005G196700 Populus trichocarpa HOM05D003952 ORTHO05D005083 0.0e+00 1830.8 1174 82.2
FAN15G1441 Fragaria x ananassa HOM05D003952 ORTHO05D005083 0.0e+00 1830.1 1215 79.8
FAN24G3461 Fragaria x ananassa HOM05D003952 ORTHO05D005083 0.0e+00 1825.8 1219 79.4
FAN27G2428 Fragaria x ananassa HOM05D003952 ORTHO05D005083 0.0e+00 1825.8 1219 79.5
Atru.chr13.2009 Acer truncatum HOM05D003952 ORTHO05D005083 0.0e+00 1822.8 1175 81.2
FAN20G1325 Fragaria x ananassa HOM05D003952 ORTHO05D005083 0.0e+00 1819.3 1219 79.3
CiPaw.15G012400 Carya illinoinensis HOM05D003952 ORTHO05D005083 0.0e+00 1815.4 1176 80.8
Gohir.A05G246500 Gossypium hirsutum HOM05D003952 ORTHO05D005083 0.0e+00 1815.4 1170 81.5
Gohir.D05G248000 Gossypium hirsutum HOM05D003952 ORTHO05D005083 0.0e+00 1812.3 1170 81.5
Gorai.009G258800 Gossypium raimondii HOM05D003952 ORTHO05D005083 0.0e+00 1810.0 1170 81.3
CSS0032669 Camellia sinensis var. sinensis HOM05D003952 ORTHO05D005083 0.0e+00 1797.7 1171 80.0
Glyma.10G221500 Glycine max HOM05D003952 ORTHO05D005083 0.0e+00 1795.0 1176 79.3
Sabra05G0149800 Salix brachista HOM05D003952 ORTHO05D005083 0.0e+00 1791.9 1228 77.5
VMungo0720G2354 Vigna mungo HOM05D003952 ORTHO05D005083 0.0e+00 1776.1 1192 78.1
Duzib116G0427 Durio zibethinus HOM05D003952 ORTHO05D005083 0.0e+00 1775.8 1170 80.0
Medtr1g098160 Medicago truncatula HOM05D003952 ORTHO05D005083 0.0e+00 1774.6 1175 78.3
Phvul.007G083500 Phaseolus vulgaris HOM05D003952 ORTHO05D005083 0.0e+00 1773.8 1192 78.2
TWI60G0338 Tripterygium wilfordii HOM05D003952 ORTHO05D005083 0.0e+00 1769.2 1173 78.5
arahy.Tifrunner.gnm1.ann1.5NL3D9 Arachis hypogaea HOM05D003952 ORTHO05D005083 0.0e+00 1766.9 1209 76.8
Lalb_Chr02g0141571 Lupinus albus HOM05D003952 ORTHO05D005083 0.0e+00 1766.1 1176 78.5
TWI32G0799 Tripterygium wilfordii HOM05D003952 ORTHO05D005083 0.0e+00 1766.1 1173 78.3
Sabra02G0051500 Salix brachista HOM05D003952 ORTHO05D005083 0.0e+00 1764.6 1231 76.8
arahy.Tifrunner.gnm1.ann1.2T81X8 Arachis hypogaea HOM05D003952 ORTHO05D005083 0.0e+00 1764.2 1209 76.7
arahy.Tifrunner.gnm1.ann1.SZWP5S Arachis hypogaea HOM05D003952 ORTHO05D005083 0.0e+00 1761.5 1168 78.3
TAR628G1191 Trochodendron aralioides HOM05D003952 ORTHO05D005083 0.0e+00 1760.7 1169 78.7
Glyma.20G170000 Glycine max HOM05D003952 ORTHO05D005083 0.0e+00 1758.4 1174 78.1
TWI34G1640 Tripterygium wilfordii HOM05D003952 ORTHO05D005083 0.0e+00 1756.9 1170 78.5
CSS0017406 Camellia sinensis var. sinensis HOM05D003952 ORTHO05D005083 0.0e+00 1755.3 1171 78.7
Eucgr.F02686 Eucalyptus grandis HOM05D003952 ORTHO05D005083 0.0e+00 1754.6 1168 78.5
Lalb_Chr06g0161721 Lupinus albus HOM05D003952 ORTHO05D005083 0.0e+00 1750.7 1174 78.3
CsaV3_7G024490 Cucumis sativus L. HOM05D003952 ORTHO05D005083 0.0e+00 1748.4 1172 77.7
Cc10_g15270 Coffea canephora HOM05D003952 ORTHO05D005083 0.0e+00 1746.9 1175 77.5
Gohir.A02G062600 Gossypium hirsutum HOM05D003952 ORTHO05D005083 0.0e+00 1744.9 1170 78.9
Gorai.005G077100 Gossypium raimondii HOM05D003952 ORTHO05D005083 0.0e+00 1744.2 1170 78.6
Gohir.D02G068200 Gossypium hirsutum HOM05D003952 ORTHO05D005083 0.0e+00 1740.7 1170 78.5
arahy.Tifrunner.gnm1.ann1.AF3FG0 Arachis hypogaea HOM05D003952 ORTHO05D005083 0.0e+00 1738.8 1200 76.0
MELO3C024067.2 Cucumis melo HOM05D003952 ORTHO05D005083 0.0e+00 1734.5 1172 77.6
Sed0012183 Sechium edule HOM05D003952 ORTHO05D005083 0.0e+00 1729.1 1168 76.5
Lj5g0005273 Lotus japonicus HOM05D003952 ORTHO05D005083 0.0e+00 1728.8 1176 77.0
Rhsim11G0087700 Rhododendron simsii HOM05D003952 ORTHO05D005083 0.0e+00 1728.0 1209 75.9
vmacro01493 Vaccinium macrocarpon HOM05D003952 ORTHO05D005083 0.0e+00 1715.7 1209 75.9
Sc20g0003770 Simmondsia chinensis HOM05D003952 ORTHO05D005083 0.0e+00 1715.3 1169 76.9
DCAR_001164 Daucus carota HOM05D003952 ORTHO05D005083 0.0e+00 1710.7 1172 76.4
Phvul.004G088300 Phaseolus vulgaris HOM05D003952 ORTHO05D005083 0.0e+00 1705.3 1176 76.3
Glyma.16G163200 Glycine max HOM05D003952 ORTHO05D005083 0.0e+00 1704.9 1174 75.9
SalBow7G2315 Salvia bowleyana HOM05D003952 ORTHO05D005083 0.0e+00 1704.9 1175 76.1
Solyc04g071990.3 Solanum lycopersicum HOM05D003952 ORTHO05D005083 0.0e+00 1704.9 1168 76.2
CAN.G495.15 Capsicum annuum HOM05D003952 ORTHO05D005083 0.0e+00 1704.1 1156 76.9
Sopen04g027970 Solanum pennellii HOM05D003952 ORTHO05D005083 0.0e+00 1704.1 1168 76.1
Ca_10663_v3 Cicer arietinum L. HOM05D003952 ORTHO05D005083 0.0e+00 1703.7 1235 73.6
MSTRG.24931 Avicennia marina HOM05D003952 ORTHO05D005083 0.0e+00 1701.0 1177 75.9
Peaxi162Scf00360g00418 Petunia axillaris HOM05D003952 ORTHO05D005083 0.0e+00 1696.8 1177 75.7
PGR042G0685 Punica granatum HOM05D003952 ORTHO05D005083 0.0e+00 1696.4 1177 76.4
Sed0019934 Sechium edule HOM05D003952 ORTHO05D005083 0.0e+00 1691.0 1172 75.6
CsaV3_6G005020 Cucumis sativus L. HOM05D003952 ORTHO05D005083 0.0e+00 1690.6 1172 75.9
Oeu051283.1 Olea europaea HOM05D003952 ORTHO05D005083 0.0e+00 1687.2 1171 74.9
MSTRG.22108 Avicennia marina HOM05D003952 ORTHO05D005083 0.0e+00 1686.4 1174 75.5
Nn008s41421 Nelumbo nucifera HOM05D003952 ORTHO05D005083 0.0e+00 1684.5 1178 75.6
CARHR023130 Cardamine hirsuta HOM05D003952 ORTHO05D005083 0.0e+00 1680.2 1175 76.1
TPR.G17028 Trifolium pratense HOM05D003952 ORTHO05D005083 0.0e+00 1680.2 1175 75.0
AT1G22770 Arabidopsis thaliana HOM05D003952 ORTHO05D005083 0.0e+00 1679.5 1177 75.1
Carub.0001s2228 Capsella rubella HOM05D003952 ORTHO05D005083 0.0e+00 1679.1 1175 75.4
MELO3C030034.2 Cucumis melo HOM05D003952 ORTHO05D005083 0.0e+00 1679.1 1172 75.4
AL1G36320 Arabidopsis lyrata HOM05D003952 ORTHO05D005083 0.0e+00 1678.7 1177 75.6
ClCG08G007370 Citrullus lanatus HOM05D003952 ORTHO05D005083 0.0e+00 1674.4 1172 75.3
Thhalv10006603m.g Eutrema salsugineum HOM05D003952 ORTHO05D005083 0.0e+00 1674.1 1176 75.4
Sp1g20280 Schrenkiella parvula HOM05D003952 ORTHO05D005083 0.0e+00 1670.6 1177 75.4
Aa31LG7G6730 Aethionema arabicum HOM05D003952 ORTHO05D005083 0.0e+00 1670.2 1173 75.5
Nitab4.5_0000099g0200 Nicotiana tabacum HOM05D003952 ORTHO05D005083 0.0e+00 1670.2 1199 74.1
Solyc12g056650.2 Solanum lycopersicum HOM05D003952 ORTHO05D005083 0.0e+00 1665.6 1176 74.4
THA.LOC104810466 Tarenaya hassleriana HOM05D003952 ORTHO05D005083 0.0e+00 1665.2 1172 75.0
ClCG09G010210 Citrullus lanatus HOM05D003952 ORTHO05D005083 0.0e+00 1664.4 1151 75.9
MBI04_g08946_MAGBIO Magnolia biondii HOM05D003952 ORTHO05D005083 0.0e+00 1660.6 1175 74.6
Sopen12g029310 Solanum pennellii HOM05D003952 ORTHO05D005083 0.0e+00 1660.6 1176 74.3
Nitab4.5_0000872g0040 Nicotiana tabacum HOM05D003952 ORTHO05D005083 0.0e+00 1658.7 1176 75.2
Oeu002069.1 Olea europaea HOM05D003952 ORTHO05D005083 0.0e+00 1658.3 1210 73.1
CAN.G26.47 Capsicum annuum HOM05D003952 ORTHO05D005083 0.0e+00 1657.1 1176 74.3
Aqoxy6G00415 Aquilegia oxysepala HOM05D003952 ORTHO05D005083 0.0e+00 1651.7 1179 74.0
Nn5g28824 Nelumbo nucifera HOM05D003952 ORTHO05D005083 0.0e+00 1650.2 1177 74.0
EL10Ac1g01605 Beta vulgaris HOM05D003952 ORTHO05D005083 0.0e+00 1647.9 1230 71.4
Nitab4.5_0004270g0010 Nicotiana tabacum HOM05D003952 ORTHO05D005083 0.0e+00 1647.1 1194 74.0
Ciclev10004044m.g Citrus clementina HOM05D003952 ORTHO05D005083 0.0e+00 1646.7 1101 79.0
SGA_v2.0_scaffold133G34641 Striga asiatica HOM05D003952 ORTHO05D005083 0.0e+00 1645.9 1173 74.3
Migut.N02951 Erythranthe guttata HOM05D003952 ORTHO05D005083 0.0e+00 1643.2 1173 74.0
Psat6g190640 Pisum sativum HOM05D003952 ORTHO05D005083 0.0e+00 1642.9 1072 79.4
A09p41970 Brassica napus HOM05D003952 ORTHO05D005083 0.0e+00 1641.7 1186 74.5
AUR62034894 Chenopodium quinoa HOM05D003952 ORTHO05D005083 0.0e+00 1641.7 1230 71.5
C05p21880 Brassica napus HOM05D003952 ORTHO05D005083 0.0e+00 1639.4 1184 74.1
Migut.C00380 Erythranthe guttata HOM05D003952 ORTHO05D005083 0.0e+00 1625.1 1173 73.8
ECA246G0004 Erigeron canadensis HOM05D003952 ORTHO05D005083 0.0e+00 1620.9 1183 73.0
Nitab4.5_0005673g0010 Nicotiana tabacum HOM05D003952 ORTHO05D005083 0.0e+00 1617.1 1167 73.8
HanXRQChr11g0320211 Helianthus annuus HOM05D003952 ORTHO05D005083 0.0e+00 1609.3 1179 73.0
Manes.18G095000 Manihot esculenta HOM05D003952 ORTHO05D005083 0.0e+00 1607.0 1176 74.0
Lsat_1_v5_gn_9_42181 Lactuca sativa HOM05D003952 ORTHO05D005083 0.0e+00 1603.6 1197 72.8
PSO170G5657 Papaver somniferum HOM05D003952 ORTHO05D005083 0.0e+00 1602.8 1177 72.0
Peaxi162Scf00160g01744 Petunia axillaris HOM05D003952 ORTHO05D005083 0.0e+00 1586.6 1205 70.5
Lsat_1_v5_gn_6_101520 Lactuca sativa HOM05D003952 ORTHO05D005083 0.0e+00 1582.0 1177 72.3
Lj7A383T43 Lonicera japonica HOM05D003952 ORTHO05D005083 0.0e+00 1573.5 1181 72.5
ATR1120G094 Amborella trichopoda HOM05D003952 ORTHO05D005083 0.0e+00 1569.3 1149 72.1
Zm00001eb122110 Zea mays HOM05D003952 ORTHO05D005083 0.0e+00 1568.5 1179 71.1
Zm00001eb337600 Zea mays HOM05D003952 ORTHO05D005083 0.0e+00 1567.7 1182 70.6
Os01g0182600 Oryza sativa ssp. japonica HOM05D003952 ORTHO05D005083 0.0e+00 1563.9 1181 70.6
HPP92_008686 Vanilla planifolia HOM05D003952 ORTHO05D005083 0.0e+00 1513.4 1171 68.8
HPP92_008674 Vanilla planifolia HOM05D003952 ORTHO05D005083 0.0e+00 1507.3 1171 68.6
AUR62026637 Chenopodium quinoa HOM05D003952 ORTHO05D005083 0.0e+00 1479.5 1113 72.1
Dinv25899 Davidia involucrata HOM05D003952 ORTHO05D005083 0.0e+00 1469.9 946 80.2
CiPaw.16G008300 Carya illinoinensis HOM05D003952 ORTHO05D005083 0.0e+00 1464.9 944 80.2
unitig_747.g21544 Utricularia gibba HOM05D003952 ORTHO05D005083 0.0e+00 1427.2 1172 67.1
COL.COLO4_13783 Corchorus olitorius HOM05D003952 ORTHO05D005083 0.0e+00 1392.1 1036 74.2
Ah.05g168180 Amaranthus hybridus HOM05D003952 ORTHO05D005083 0.0e+00 1372.1 1079 69.3
Lalb_Chr01g0009771 Lupinus albus HOM05D003952 ORTHO05D005083 0.0e+00 1364.7 976 73.8
Sed0012813 Sechium edule HOM05D003952 ORTHO05D005083 0.0e+00 1345.9 944 74.9
Lj4C703T11 Lonicera japonica HOM05D003952 ORTHO05D005083 0.0e+00 1250.0 961 71.2
CSS0023419 Camellia sinensis var. sinensis HOM05D003952 ORTHO05D005083 0.0e+00 1246.9 976 70.5
PGSC0003DMG400018791 Solanum tuberosum HOM05D003952 ORTHO05D005083 0.0e+00 1241.1 890 74.2
Actinidia29549 Actinidia chinensis HOM05D003952 ORTHO05D005083 0.0e+00 1219.9 966 68.9
unitig_32.g11167 Utricularia gibba HOM05D003952 ORTHO05D005083 0.0e+00 1201.8 1169 58.7
BcaNung06971 Brassica carinata HOM05D003952 ORTHO05D005083 0.0e+00 1182.5 810 76.4
TAR381G0458 Trochodendron aralioides HOM05D003952 ORTHO05D005083 0.0e+00 1146.3 816 75.7
VMungo0464G1608 Vigna mungo HOM05D003952 ORTHO05D005083 0.0e+00 1138.3 809 74.9
Oeu022058.1 Olea europaea HOM05D003952 ORTHO05D005083 0.0e+00 1120.1 814 74.4
SalBow6G3936 Salvia bowleyana HOM05D003952 ORTHO05D005083 1.1e-308 1063.5 1166 54.8
Hma1.2p1_0678F.1_g202015 Hydrangea macrophylla HOM05D003952 ORTHO05D005083 2.0e-292 1009.6 725 75.0
SMO367G0140 Selaginella moellendorffii HOM05D003952 ORTHO05D005083 6.5e-288 994.6 1173 49.2
Mapoly0019s0145 Marchantia polymorpha HOM05D003952 ORTHO05D005083 1.6e-278 963.4 1200 46.7
GSVIVG01001406001 Vitis vinifera HOM05D003952 ORTHO05D005083 1.0e-272 944.1 539 87.2
Cpa.g.sc26.82 Carica papaya HOM05D003952 ORTHO05D005083 1.1e-255 887.5 603 78.1
CDE04G2370 Ceratophyllum demersum HOM05D003952 ORTHO05D005083 4.7e-246 855.5 719 67.3
CDE04G1363 Ceratophyllum demersum HOM05D003952 ORTHO05D005083 2.0e-191 674.1 431 79.1
VMungo0464G1293 Vigna mungo HOM05D003952 ORTHO05D005083 5.9e-164 582.8 362 81.8
Actinidia04747 Actinidia chinensis HOM05D003952 ORTHO05D005083 1.0e-139 502.3 896 41.0
TAR381G1674 Trochodendron aralioides HOM05D003952 ORTHO05D005083 3.6e-137 493.8 306 79.7
BolC5t30883H Brassica oleracea HOM05D003952 ORTHO05D005083 6.8e-136 489.6 311 78.1
BraA09t39685Z Brassica rapa HOM05D003952 ORTHO05D005083 6.8e-136 489.6 311 78.1
Psat7g241120 Pisum sativum HOM05D002716 ORTHO05D003324 1.5e-127 461.8 622 46.6
GSVIVG01001405001 Vitis vinifera HOM05D003952 ORTHO05D005083 2.1e-116 424.9 286 80.1
AagrBONN_evm.TU.Sc2ySwM_117.1660 Anthoceros agrestis HOM05D003952 ORTHO05D005083 1.5e-114 418.7 811 36.6
CBR_g22347 Chara braunii HOM05D003952 ORTHO05D005083 1.5e-106 392.1 1298 29.4
Cpa.g.sc26.81 Carica papaya HOM05D003952 ORTHO05D005083 1.5e-95 355.5 226 76.1
CDE04G3041 Ceratophyllum demersum HOM05D003952 ORTHO05D005083 5.5e-85 320.5 509 42.0
Lsat_1_v5_gn_2_63220 Lactuca sativa HOM05D003952 ORTHO05D005083 3.5e-84 317.8 283 63.6
Lj4A703G54 Lonicera japonica HOM05D003952 ORTHO05D005083 8.7e-83 313.2 197 77.2
COL.COLO4_13782 Corchorus olitorius HOM05D003952 ORTHO05D005083 2.6e-79 301.6 182 79.7
HanXRQChr10g0278641 Helianthus annuus HOM05D003952 ORTHO05D005083 9.7e-74 283.1 206 72.3
Lsat_1_v5_gn_8_75660 Lactuca sativa HOM05D003952 ORTHO05D005083 1.8e-72 278.9 257 62.3
CAN.G1225.1 Capsicum annuum HOM05D003952 ORTHO05D008201 3.3e-66 258.1 189 72.5
Sopen10g022170 Solanum pennellii HOM05D003952 ORTHO05D011221 8.2e-65 253.4 144 84.0
Lsat_1_v5_gn_5_129380 Lactuca sativa HOM05D003952 ORTHO05D015589 9.1e-64 250.0 180 72.2
Lalb_Chr01g0009781 Lupinus albus HOM05D003952 ORTHO05D005083 7.2e-61 240.4 188 69.1
Lsat_1_v5_gn_3_78320 Lactuca sativa HOM05D003952 ORTHO05D005083 1.8e-51 209.1 130 82.3
CANSAT25G0696 Cannabis sativa HOM05D003952 ORTHO05D005083 1.7e-49 202.6 118 89.0
Psat5g166880 Pisum sativum HOM05D003952 ORTHO05D005083 4.8e-49 201.1 169 62.1
Lsat_1_v5_gn_5_64561 Lactuca sativa HOM05D003952 ORTHO05D004515 1.9e-45 189.1 125 75.2
Duzib041G0651 Durio zibethinus HOM05D003952 ORTHO05D005083 1.5e-37 162.9 92 91.3
Psat0s4455g0040 Pisum sativum HOM05D003952 ORTHO05D037363 1.1e-29 136.7 86 76.7
Psat7g010640 Pisum sativum HOM05D003952 ORTHO05D037363 1.1e-29 136.7 91 71.4
Psat7g010720 Pisum sativum HOM05D003952 ORTHO05D037363 1.1e-29 136.7 91 71.4
Psat0s2845g0120 Pisum sativum HOM05D004054 ORTHO05D004945 6.2e-20 104.4 78 71.8
TPR.G25241 Trifolium pratense HOM05D003952 ORTHO05D048898 4.4e-18 98.2 59 78.0
Nn3g20398 Nelumbo nucifera HOM05D003952 ORTHO05D005083 4.9e-17 94.7 82 65.9
Lsat_1_v5_gn_5_15721 Lactuca sativa HOM05D001610 ORTHO05D001585 4.1e-16 91.7 133 45.9
Lsat_1_v5_gn_3_73081 Lactuca sativa HOM05D003952 ORTHO05D015589 3.5e-15 88.6 46 80.4
Lsat_1_v5_gn_7_62680 Lactuca sativa HOM05D003952 ORTHO05D015589 4.6e-15 88.2 47 78.7
PGSC0003DMG400001110 Solanum tuberosum HOM05D003952 ORTHO05D005083 1.2e-12 80.1 82 51.2


User provided reference genes

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