Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G0913 Cannabis sativa HOM05D006475 ORTHO05D007969 1.6e-71 273.5 243 100.0
Cfa012603 Carpinus fangiana HOM05D006475 ORTHO05D007969 6.1e-31 138.7 238 67.2
Prupe.5G019900 Prunus persica HOM05D006475 ORTHO05D007969 3.0e-30 136.3 239 66.1
PGR031G1524 Punica granatum HOM05D006475 ORTHO05D007969 1.2e-29 134.4 219 71.2
CiPaw.12G072000 Carya illinoinensis HOM05D006475 ORTHO05D007969 4.4e-29 132.5 244 64.3
Thecc.01G139200 Theobroma cacao HOM05D006475 ORTHO05D007969 1.3e-28 131.0 240 65.4
Potri.003G103400 Populus trichocarpa HOM05D006475 ORTHO05D007969 3.7e-28 129.4 213 70.4
Haze_08058 Corylus avellana HOM05D006475 ORTHO05D007969 6.3e-28 128.6 250 63.2
Haze_08048 Corylus avellana HOM05D006475 ORTHO05D007969 1.1e-27 127.9 258 62.0
Actinidia14740 Actinidia chinensis HOM05D006475 ORTHO05D007969 3.1e-27 126.3 217 67.3
RcHm_v2.0_Chr7g0213461 Rosa chinensis HOM05D006475 ORTHO05D007969 3.1e-27 126.3 213 70.4
Potri.001G130500 Populus trichocarpa HOM05D006475 ORTHO05D007969 1.2e-26 124.4 234 63.7
Sabra03G0070600 Salix brachista HOM05D006475 ORTHO05D007969 1.6e-26 124.0 213 69.0
Actinidia18163 Actinidia chinensis HOM05D006475 ORTHO05D007969 3.5e-26 122.9 212 68.9
Nitab4.5_0006541g0010 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.0e-25 121.3 244 61.5
Peaxi162Scf00045g00636 Petunia axillaris HOM05D006475 ORTHO05D007969 8.6e-25 118.2 242 62.0
Sopen08g001530 Solanum pennellii HOM05D006475 ORTHO05D007969 8.6e-25 118.2 241 61.4
FvH4_5g24000 Fragaria vesca HOM05D006475 ORTHO05D007969 1.1e-24 117.9 206 69.9
Nn3g19252 Nelumbo nucifera HOM05D006475 ORTHO05D007969 1.1e-24 117.9 218 67.9
Rhsim07G0139200 Rhododendron simsii HOM05D006475 ORTHO05D007969 1.1e-24 117.9 216 67.6
FAN08G1612 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.9e-24 117.1 206 69.4
FAN13G3229 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.9e-24 117.1 206 69.4
Gohir.A05G381700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 1.9e-24 117.1 71 74.6
Duzib187G1769 Durio zibethinus HOM05D006475 ORTHO05D007969 2.5e-24 116.7 237 62.0
FAN18G1960 Fragaria x ananassa HOM05D006475 ORTHO05D007969 3.3e-24 116.3 206 69.4
Manes.17G003100 Manihot esculenta HOM05D006475 ORTHO05D007969 3.3e-24 116.3 237 64.1
Ciclev10005760m.g Citrus clementina HOM05D006475 ORTHO05D007969 4.2e-24 115.9 244 64.8
Cc08_g05010 Coffea canephora HOM05D006475 ORTHO05D007969 4.2e-24 115.9 245 48.6
Lj8A334T74 Lonicera japonica HOM05D006475 ORTHO05D007969 7.2e-24 115.2 239 61.5
FAN04G1597 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.2e-23 114.4 207 68.6
Aqoxy7G00886 Aquilegia oxysepala HOM05D006475 ORTHO05D007969 1.6e-23 114.0 73 74.0
Nitab4.5_0001175g0100 Nicotiana tabacum HOM05D006475 ORTHO05D007969 2.1e-23 113.6 243 60.5
A01p11110 Brassica napus HOM05D006475 ORTHO05D007969 2.8e-23 113.2 212 67.0
BraA01t01057Z Brassica rapa HOM05D006475 ORTHO05D007969 2.8e-23 113.2 212 67.0
CAN.G320.16 Capsicum annuum HOM05D006475 ORTHO05D007969 2.8e-23 113.2 244 61.9
SGA_v2.0_scaffold144G35881 Striga asiatica HOM05D006475 ORTHO05D007969 3.6e-23 112.8 70 72.9
GSVIVG01022797001 Vitis vinifera HOM05D006475 ORTHO05D007969 3.6e-23 112.8 70 71.4
Eucgr.D02591 Eucalyptus grandis HOM05D006475 ORTHO05D007969 4.7e-23 112.5 243 61.3
BcaC09g51436 Brassica carinata HOM05D006475 ORTHO05D007969 6.1e-23 112.1 212 67.0
BolC1t01287H Brassica oleracea HOM05D006475 ORTHO05D007969 6.1e-23 112.1 212 67.0
Carub.0007s2200 Capsella rubella HOM05D006475 ORTHO05D007969 8.0e-23 111.7 212 66.0
C01p13140 Brassica napus HOM05D006475 ORTHO05D007969 1.0e-22 111.3 69 72.5
Hma1.2p1_0544F.1_g175570 Hydrangea macrophylla HOM05D006475 ORTHO05D007969 1.4e-22 110.9 185 73.5
CSS0010448 Camellia sinensis var. sinensis HOM05D006475 ORTHO05D007969 1.8e-22 110.5 245 61.2
AT4G19150 Arabidopsis thaliana HOM05D006475 ORTHO05D007969 2.3e-22 110.2 68 73.5
Medtr5g026800 Medicago truncatula HOM05D006475 ORTHO05D007969 3.0e-22 109.8 71 74.6
PGSC0003DMG400018460 Solanum tuberosum HOM05D006475 ORTHO05D007969 3.0e-22 109.8 244 58.6
unitig_0.g2207 Utricularia gibba HOM05D006475 ORTHO05D007969 3.0e-22 109.8 69 71.0
BcaNung04008 Brassica carinata HOM05D006475 ORTHO05D007969 4.0e-22 109.4 207 67.6
Ca_25099_v3 Cicer arietinum L. HOM05D006475 ORTHO05D007969 4.0e-22 109.4 223 65.5
Phvul.002G128300 Phaseolus vulgaris HOM05D006475 ORTHO05D007969 4.0e-22 109.4 219 66.2
TWI23G0232 Tripterygium wilfordii HOM05D006475 ORTHO05D007969 5.2e-22 109.0 240 60.4
Glyma.01G149900 Glycine max HOM05D006475 ORTHO05D007969 6.8e-22 108.6 209 70.3
arahy.Tifrunner.gnm1.ann1.SLXS5Y Arachis hypogaea HOM05D006475 ORTHO05D007969 8.9e-22 108.2 70 71.4
EL10Ac5g11923 Beta vulgaris HOM05D006475 ORTHO05D007969 8.9e-22 108.2 75 65.3
PSO717G0136 Papaver somniferum HOM05D006475 ORTHO05D007969 8.9e-22 108.2 68 72.1
Lalb_Chr05g0215421 Lupinus albus HOM05D006475 ORTHO05D007969 1.5e-21 107.5 231 62.8
Gohir.D03G018700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 2.6e-21 106.7 71 69.0
Solyc08g005520.3 Solanum lycopersicum HOM05D006475 ORTHO05D007969 2.6e-21 106.7 241 60.2
Thhalv10026017m.g Eutrema salsugineum HOM05D006475 ORTHO05D007969 4.4e-21 105.9 212 66.0
PSO675G8107 Papaver somniferum HOM05D006475 ORTHO05D007969 5.7e-21 105.5 68 70.6
VMungo1215G2540 Vigna mungo HOM05D006475 ORTHO05D007969 5.7e-21 105.5 241 61.8
arahy.Tifrunner.gnm1.ann1.0NMX6V Arachis hypogaea HOM05D006475 ORTHO05D007969 7.5e-21 105.1 186 71.0
arahy.Tifrunner.gnm1.ann1.CC5QNU Arachis hypogaea HOM05D006475 ORTHO05D007969 7.5e-21 105.1 186 71.0
CARHR226020 Cardamine hirsuta HOM05D006475 ORTHO05D007969 7.5e-21 105.1 207 65.2
Ah.12g056010 Amaranthus hybridus HOM05D006475 ORTHO05D007969 9.8e-21 104.8 245 57.6
AL7G34940 Arabidopsis lyrata HOM05D006475 ORTHO05D007969 9.8e-21 104.8 240 60.4
Sp7g17850 Schrenkiella parvula HOM05D006475 ORTHO05D007969 1.7e-20 104.0 207 65.7
TPR.G17268 Trifolium pratense HOM05D006475 ORTHO05D007969 1.7e-20 104.0 198 69.2
CDE11G0189 Ceratophyllum demersum HOM05D006475 ORTHO05D007969 2.2e-20 103.6 66 69.7
DCAR_028235 Daucus carota HOM05D006475 ORTHO05D007969 2.2e-20 103.6 242 58.7
Gorai.012G037900 Gossypium raimondii HOM05D006475 ORTHO05D007969 2.2e-20 103.6 238 60.9
Lsat_1_v5_gn_6_15221 Lactuca sativa HOM05D006475 ORTHO05D007969 6.3e-20 102.1 218 64.2
THA.LOC104812889 Tarenaya hassleriana HOM05D006475 ORTHO05D007969 6.3e-20 102.1 213 62.9
Gohir.D04G033600 Gossypium hirsutum HOM05D006475 ORTHO05D007969 8.3e-20 101.7 238 60.5
Cpa.g.sc137.18 Carica papaya HOM05D006475 ORTHO05D007969 1.1e-19 101.3 243 60.1
Migut.E01351 Erythranthe guttata HOM05D006475 ORTHO05D007969 1.1e-19 101.3 69 65.2
Aa31LG6G1840 Aethionema arabicum HOM05D006475 ORTHO05D007969 1.8e-19 100.5 212 63.2
MSTRG.1769 Avicennia marina HOM05D006475 ORTHO05D007969 1.8e-19 100.5 205 66.3
Dinv28010 Davidia involucrata HOM05D006475 ORTHO05D007969 2.4e-19 100.1 64 73.4
SalBow8G0939 Salvia bowleyana HOM05D006475 ORTHO05D007969 2.4e-19 100.1 219 64.4
AUR62007413 Chenopodium quinoa HOM05D006475 ORTHO05D007969 3.2e-19 99.8 242 56.2
HanXRQChr08g0226771 Helianthus annuus HOM05D006475 ORTHO05D007969 3.2e-19 99.8 246 57.7
Hund11101 Selenicereus undatus HOM05D006475 ORTHO05D007969 3.2e-19 99.8 252 56.3
AUR62027319 Chenopodium quinoa HOM05D006475 ORTHO05D007969 7.0e-19 98.6 248 56.0
ECA233G2922 Erigeron canadensis HOM05D006475 ORTHO05D007969 1.6e-18 97.4 75 65.3
Glyma.09G214000 Glycine max HOM05D006475 ORTHO05D007969 2.7e-18 96.7 237 62.0
AagrBONN_evm.TU.Sc2ySwM_228.4166 Anthoceros agrestis HOM05D006475 ORTHO05D007969 4.5e-18 95.9 69 60.9
arahy.Tifrunner.gnm1.ann1.17PB5S Arachis hypogaea HOM05D006475 ORTHO05D007969 5.9e-18 95.5 206 64.1
arahy.Tifrunner.gnm1.ann1.Y3VSY6 Arachis hypogaea HOM05D006475 ORTHO05D007969 5.9e-18 95.5 186 52.7
Psat2g142320 Pisum sativum HOM05D006475 ORTHO05D007969 5.9e-18 95.5 63 73.0
HPP92_021118 Vanilla planifolia HOM05D006475 ORTHO05D007969 5.9e-18 95.5 222 62.6
Os10g0580700 Oryza sativa ssp. japonica HOM05D006475 ORTHO05D007969 1.3e-17 94.4 68 63.2
vmacro17427 Vaccinium macrocarpon HOM05D006475 ORTHO05D007969 8.6e-17 91.7 293 51.5
C03p81780 Brassica napus HOM05D006475 ORTHO05D007969 1.9e-16 90.5 69 63.8
Zm00001eb025510 Zea mays HOM05D006475 ORTHO05D007969 4.3e-16 89.4 201 66.2
SEGI_07236 Sequoiadendron giganteum HOM05D006475 ORTHO05D007969 5.6e-16 89.0 73 58.9
BolC3t20450H Brassica oleracea HOM05D006475 ORTHO05D007969 1.6e-15 87.4 69 62.3
QL08p050707 Quercus lobata HOM05D006475 ORTHO05D007969 1.8e-14 84.0 178 71.3
Mapoly0051s0035 Marchantia polymorpha HOM05D006475 ORTHO05D007969 2.3e-14 83.6 68 52.9
Lj2g0004034 Lotus japonicus HOM05D006475 ORTHO05D007969 2.6e-13 80.1 55 69.1
ClCG10G015530 Citrullus lanatus HOM05D000058 ORTHO05D000077 4.4e-13 79.3 48 75.0
Sed0010053 Sechium edule HOM05D006475 ORTHO05D007969 8.3e-12 75.1 47 72.3
Pp3c7_14210 Physcomitrium patens HOM05D006475 ORTHO05D007969 3.2e-11 73.2 51 62.7
CsaV3_3G040920 Cucumis sativus L. HOM05D006475 ORTHO05D007969 7.8e-10 68.6 204 61.8
FAN18G4370 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.3e-09 67.8 172 69.2
arahy.Tifrunner.gnm1.ann1.79230D Arachis hypogaea HOM05D006475 ORTHO05D007969 1.7e-09 67.4 186 44.1
TAR375G0514 Trochodendron aralioides HOM05D006475 ORTHO05D007969 8.6e-09 65.1 238 55.0
CBR_g41202 Chara braunii HOM05D006475 ORTHO05D007969 1.9e-08 63.9 45 57.8
arahy.Tifrunner.gnm1.ann1.X7UPX8 Arachis hypogaea HOM05D006475 ORTHO05D007969 2.5e-08 63.5 215 56.7
Nitab4.5_0000532g0060 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.1e-06 58.2 34 73.5


User provided reference genes

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