Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G0851 Cannabis sativa HOM05D006310 ORTHO05D007768 3.2e-92 342.4 275 100.0
Haze_08202 Corylus avellana HOM05D006310 ORTHO05D007768 1.8e-34 150.6 199 47.7
QL12p004739 Quercus lobata HOM05D006310 ORTHO05D007768 4.8e-32 142.5 202 47.0
Dinv25232 Davidia involucrata HOM05D006310 ORTHO05D007768 6.3e-32 142.1 217 47.5
Gohir.A08G155500 Gossypium hirsutum HOM05D006310 ORTHO05D007768 1.1e-31 141.4 193 45.1
Cfa012467 Carpinus fangiana HOM05D006310 ORTHO05D007768 1.2e-30 137.9 199 45.7
Gohir.D08G176100 Gossypium hirsutum HOM05D006310 ORTHO05D007768 2.0e-30 137.1 193 44.0
Dinv28973 Davidia involucrata HOM05D006310 ORTHO05D007768 2.6e-30 136.7 222 43.7
Thecc.03G224800 Theobroma cacao HOM05D006310 ORTHO05D007768 3.4e-30 136.3 203 43.3
Gorai.004G183900 Gossypium raimondii HOM05D006310 ORTHO05D007768 5.9e-30 135.6 193 44.0
Duzib205G0324 Durio zibethinus HOM05D006310 ORTHO05D007768 7.7e-30 135.2 203 45.3
Duzib084G0468 Durio zibethinus HOM05D006310 ORTHO05D007768 5.0e-29 132.5 203 42.4
MD06G1036900 Malus domestica HOM05D006310 ORTHO05D007768 1.4e-28 131.0 182 45.6
CiPaw.12G065800 Carya illinoinensis HOM05D006310 ORTHO05D007768 1.9e-28 130.6 204 46.1
Prupe.5G032400 Prunus persica HOM05D006310 ORTHO05D007768 3.2e-28 129.8 189 42.3
PGR031G3884 Punica granatum HOM05D006310 ORTHO05D007768 3.2e-28 129.8 201 52.7
CSS0006923 Camellia sinensis var. sinensis HOM05D006310 ORTHO05D007768 5.5e-28 129.0 207 41.5
CSS0048597 Camellia sinensis var. sinensis HOM05D006310 ORTHO05D007768 2.7e-27 126.7 203 46.3
Lj2A236G56 Lonicera japonica HOM05D006310 ORTHO05D007768 6.1e-27 125.6 208 48.1
Manes.15G192960 Manihot esculenta HOM05D006310 ORTHO05D007768 1.8e-26 124.0 200 46.0
Hma1.2p1_0303F.1_g118950 Hydrangea macrophylla HOM05D006310 ORTHO05D007768 3.9e-26 122.9 198 52.5
COL.COLO4_16996 Corchorus olitorius HOM05D006310 ORTHO05D007768 8.8e-26 121.7 205 41.0
Eucgr.D02211 Eucalyptus grandis HOM05D006310 ORTHO05D007768 2.5e-25 120.2 207 45.9
Oeu006245.1 Olea europaea HOM05D006310 ORTHO05D007768 4.3e-25 119.4 209 41.1
Potri.001G140500 Populus trichocarpa HOM05D006310 ORTHO05D007768 7.4e-25 118.6 197 42.6
Sabra01G0109300 Salix brachista HOM05D006310 ORTHO05D007768 9.7e-25 118.2 197 42.6
Atru.chr6.1649 Acer truncatum HOM05D006310 ORTHO05D007768 1.7e-24 117.5 201 42.8
FAN18G3281 Fragaria x ananassa HOM05D006310 ORTHO05D007768 2.8e-24 116.7 185 40.0
Actinidia03362 Actinidia chinensis HOM05D006310 ORTHO05D007768 8.2e-24 115.2 198 44.9
FvH4_5g22450 Fragaria vesca HOM05D006310 ORTHO05D007768 1.1e-23 114.8 185 40.0
Gohir.A11G031400 Gossypium hirsutum HOM05D006310 ORTHO05D007768 1.4e-23 114.4 209 37.8
TWI15G1132 Tripterygium wilfordii HOM05D006310 ORTHO05D007768 1.4e-23 114.4 208 41.8
FAN08G3522 Fragaria x ananassa HOM05D006310 ORTHO05D007768 1.8e-23 114.0 185 40.0
THA.LOC104827750 Tarenaya hassleriana HOM05D006310 ORTHO05D007768 2.4e-23 113.6 188 43.1
Gorai.007G033000 Gossypium raimondii HOM05D006310 ORTHO05D007768 3.1e-23 113.2 209 37.8
ClCG09G011810 Citrullus lanatus HOM05D006310 ORTHO05D007768 4.1e-23 112.8 200 40.5
Nitab4.5_0003625g0020 Nicotiana tabacum HOM05D006310 ORTHO05D007768 4.1e-23 112.8 216 41.7
Lalb_Chr05g0215911 Lupinus albus HOM05D006310 ORTHO05D007768 5.3e-23 112.5 201 41.3
Migut.E00791 Erythranthe guttata HOM05D006310 ORTHO05D007768 9.1e-23 111.7 190 47.9
FAN04G1670 Fragaria x ananassa HOM05D006310 ORTHO05D007768 2.0e-22 110.5 185 38.9
FAN18G0493 Fragaria x ananassa HOM05D006310 ORTHO05D007768 2.0e-22 110.5 185 39.5
Hma1.2p1_1379F.1_g279220 Hydrangea macrophylla HOM05D006310 ORTHO05D007768 2.0e-22 110.5 194 40.7
CAN.G298.28 Capsicum annuum HOM05D006310 ORTHO05D007768 4.5e-22 109.4 205 40.5
Thhalv10026016m.g Eutrema salsugineum HOM05D006310 ORTHO05D007768 1.3e-21 107.8 193 46.1
Gohir.D11G030100 Gossypium hirsutum HOM05D006310 ORTHO05D007768 1.3e-21 107.8 209 36.8
Nitab4.5_0000127g0100 Nicotiana tabacum HOM05D006310 ORTHO05D007768 1.3e-21 107.8 219 39.7
Cc08_g03010 Coffea canephora HOM05D006310 ORTHO05D007768 3.8e-21 106.3 205 40.0
Actinidia25977 Actinidia chinensis HOM05D006310 ORTHO05D007768 1.9e-20 104.0 194 43.8
Actinidia14793 Actinidia chinensis HOM05D006310 ORTHO05D007768 4.2e-20 102.8 197 41.6
Glyma.01G017000 Glycine max HOM05D006310 ORTHO05D007768 4.2e-20 102.8 194 41.8
vmacro00314 Vaccinium macrocarpon HOM05D006310 ORTHO05D007768 4.2e-20 102.8 196 39.8
arahy.Tifrunner.gnm1.ann1.P6RCLW Arachis hypogaea HOM05D006310 ORTHO05D007768 5.5e-20 102.4 197 41.6
arahy.Tifrunner.gnm1.ann1.U64MAA Arachis hypogaea HOM05D006310 ORTHO05D007768 5.5e-20 102.4 197 41.6
Sed0010075 Sechium edule HOM05D006310 ORTHO05D007768 5.5e-20 102.4 199 43.2
THA.LOC104806719 Tarenaya hassleriana HOM05D006310 ORTHO05D007768 9.4e-20 101.7 195 41.5
TAR629G1434 Trochodendron aralioides HOM05D006310 ORTHO05D007768 1.2e-19 101.3 221 43.4
Lj2g0018875 Lotus japonicus HOM05D006310 ORTHO05D007768 1.6e-19 100.9 192 42.7
PGSC0003DMG400017523 Solanum tuberosum HOM05D006310 ORTHO05D007768 1.6e-19 100.9 222 36.9
Carub.0007s2340 Capsella rubella HOM05D006310 ORTHO05D007768 2.1e-19 100.5 201 44.3
Psat2g137200 Pisum sativum HOM05D006310 ORTHO05D007768 3.6e-19 99.8 187 41.2
BcaNung00042 Brassica carinata HOM05D006310 ORTHO05D007768 6.1e-19 99.0 191 41.4
BcaC09g51583 Brassica carinata HOM05D006310 ORTHO05D007768 7.9e-19 98.6 188 47.9
A01p09980 Brassica napus HOM05D006310 ORTHO05D007768 7.9e-19 98.6 189 44.4
MBI04_g20344_MAGBIO Magnolia biondii HOM05D006310 ORTHO05D007768 1.0e-18 98.2 216 38.4
AL7G36570 Arabidopsis lyrata HOM05D006310 ORTHO05D007768 1.4e-18 97.8 192 41.7
Sopen08g025280 Solanum pennellii HOM05D006310 ORTHO05D007768 1.4e-18 97.8 221 36.2
BolC1t01140H Brassica oleracea HOM05D006310 ORTHO05D007768 1.8e-18 97.4 188 47.3
C01p11780 Brassica napus HOM05D006310 ORTHO05D007768 2.3e-18 97.1 188 45.2
DCAR_008251 Daucus carota HOM05D006310 ORTHO05D007768 2.3e-18 97.1 203 40.9
Medtr5g029910 Medicago truncatula HOM05D006310 ORTHO05D007768 2.3e-18 97.1 186 39.8
Actinidia09184 Actinidia chinensis HOM05D006310 ORTHO05D007768 3.0e-18 96.7 195 40.5
CsaV3_3G049010 Cucumis sativus L. HOM05D006310 ORTHO05D007768 3.0e-18 96.7 207 37.2
Sp7g16170 Schrenkiella parvula HOM05D006310 ORTHO05D007768 3.0e-18 96.7 198 40.4
Solyc08g076730.4 Solanum lycopersicum HOM05D006310 ORTHO05D007768 3.0e-18 96.7 221 35.7
Ca_25198_v3 Cicer arietinum L. HOM05D006310 ORTHO05D007768 3.9e-18 96.3 188 38.3
MELO3C003424.2 Cucumis melo HOM05D006310 ORTHO05D007768 3.9e-18 96.3 196 36.2
PSO063G6445 Papaver somniferum HOM05D006310 ORTHO05D007768 5.1e-18 95.9 209 37.8
MSTRG.13750 Avicennia marina HOM05D006310 ORTHO05D007768 8.8e-18 95.1 195 37.9
PSO782G4606 Papaver somniferum HOM05D006310 ORTHO05D007768 8.8e-18 95.1 213 36.2
CARHR224680 Cardamine hirsuta HOM05D006310 ORTHO05D007768 1.1e-17 94.7 194 45.4
BcaB04g18451 Brassica carinata HOM05D006310 ORTHO05D007768 1.5e-17 94.4 192 41.1
Glyma.09G205800 Glycine max HOM05D006310 ORTHO05D007768 1.5e-17 94.4 193 39.4
Nn3g19447 Nelumbo nucifera HOM05D006310 ORTHO05D007768 2.0e-17 94.0 204 42.2
CDE02G1298 Ceratophyllum demersum HOM05D006310 ORTHO05D007768 3.3e-17 93.2 204 40.2
AT4G17940 Arabidopsis thaliana HOM05D006310 ORTHO05D007768 4.4e-17 92.8 193 44.0
Cpa.g.sc90.63 Carica papaya HOM05D006310 ORTHO05D007768 7.4e-17 92.0 208 38.0
CiPaw.11G095600 Carya illinoinensis HOM05D006310 ORTHO05D007768 7.4e-17 92.0 186 38.7
BraA01t00942Z Brassica rapa HOM05D006310 ORTHO05D007768 1.7e-16 90.9 191 44.5
Aa31LG6G690 Aethionema arabicum HOM05D006310 ORTHO05D007768 2.8e-16 90.1 194 40.2
CDE11G1127 Ceratophyllum demersum HOM05D006310 ORTHO05D007768 4.8e-16 89.4 208 35.6
Aqoxy3G02279 Aquilegia oxysepala HOM05D006310 ORTHO05D007768 8.2e-16 88.6 215 38.6
Phvul.002G140000 Phaseolus vulgaris HOM05D006310 ORTHO05D007768 1.4e-15 87.8 197 37.1
Ah.07g200600 Amaranthus hybridus HOM05D006310 ORTHO05D007768 2.4e-15 87.0 189 45.5
A08p13440 Brassica napus HOM05D006310 ORTHO05D007768 3.1e-15 86.7 192 39.1
ATR0665G126 Amborella trichopoda HOM05D006310 ORTHO05D007768 7.0e-15 85.5 225 35.1
Rhsim11G0017700 Rhododendron simsii HOM05D006310 ORTHO05D007768 7.0e-15 85.5 197 37.1
EL10Ac5g12081 Beta vulgaris HOM05D006310 ORTHO05D007768 9.1e-15 85.1 194 46.4
BraA08t33321Z Brassica rapa HOM05D006310 ORTHO05D007768 1.2e-14 84.7 192 38.5
BcaC07g38109 Brassica carinata HOM05D006310 ORTHO05D007768 2.0e-14 84.0 186 37.6
CDE06G1171 Ceratophyllum demersum HOM05D006310 ORTHO05D007768 2.0e-14 84.0 195 33.3
VMungo1080G0874 Vigna mungo HOM05D006310 ORTHO05D007768 2.0e-14 84.0 192 35.9
BolC8t48532H Brassica oleracea HOM05D006310 ORTHO05D007768 3.5e-14 83.2 192 37.5
Nn1g00145 Nelumbo nucifera HOM05D006310 ORTHO05D007768 7.7e-14 82.0 211 41.2
VMungo1215G2715 Vigna mungo HOM05D006310 ORTHO05D007768 7.7e-14 82.0 193 36.8
RcHm_v2.0_Chr7g0210241 Rosa chinensis HOM05D006310 ORTHO05D007768 1.0e-13 81.6 147 38.8
ECA246G3187 Erigeron canadensis HOM05D006310 ORTHO05D007768 1.9e-12 77.4 191 35.6
Lsat_1_v5_gn_3_18800 Lactuca sativa HOM05D006310 ORTHO05D007768 2.5e-12 77.0 201 40.8
HPP92_014659 Vanilla planifolia HOM05D006310 ORTHO05D007768 2.7e-11 73.6 178 32.6
GSVIVG01013133001 Vitis vinifera HOM05D006310 ORTHO05D007768 3.6e-11 73.2 117 41.9
HanXRQChr17g0536151 Helianthus annuus HOM05D006310 ORTHO05D007768 1.8e-10 70.9 209 32.5
SGA_v2.0_scaffold20G09266 Striga asiatica HOM05D006310 ORTHO05D007768 2.3e-10 70.5 188 31.9
Peaxi162Scf00184g00001 Petunia axillaris HOM05D006310 ORTHO05D007768 3.0e-10 70.1 201 39.8
Hund14348 Selenicereus undatus HOM05D006310 ORTHO05D007768 4.0e-10 69.7 190 33.2
HanXRQChr06g0167641 Helianthus annuus HOM05D006310 ORTHO05D007768 2.6e-09 67.0 139 35.3
Eucgr.E00268 Eucalyptus grandis HOM05D006310 ORTHO05D007768 1.6e-06 57.8 39 64.1
AUR62018697 Chenopodium quinoa HOM05D006310 ORTHO05D007768 2.0e-06 57.4 29 89.7
Eucgr.E00267 Eucalyptus grandis HOM05D006310 ORTHO05D007768 2.0e-06 57.4 44 59.1
Zm00001eb024820 Zea mays HOM05D006310 ORTHO05D007768 2.0e-06 57.4 36 66.7
SEGI_34370 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 4.5e-06 56.2 44 56.8
unitig_699.g19788 Utricularia gibba HOM05D006310 ORTHO05D007768 4.5e-06 56.2 40 62.5
Ca_21670_v3 Cicer arietinum L. HOM05D001903 ORTHO05D001847 7.7e-06 55.5 211 28.9


User provided reference genes

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