Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G0370 Cannabis sativa HOM05D007590 ORTHO05D007875 1.7e-53 212.6 122 100.0
Prupe.5G120200 Prunus persica HOM05D007590 ORTHO05D007875 3.5e-19 98.6 124 48.4
Hma1.2p1_1746F.1_g300410 Hydrangea macrophylla HOM05D007590 ORTHO05D007875 1.3e-18 96.7 122 45.1
Cfa012011 Carpinus fangiana HOM05D007590 ORTHO05D007875 3.9e-18 95.1 128 51.6
TAR375G1006 Trochodendron aralioides HOM05D007590 ORTHO05D007875 8.7e-18 94.0 119 48.7
TAR629G1835 Trochodendron aralioides HOM05D007590 ORTHO05D007875 8.7e-18 94.0 119 48.7
FAN13G0413 Fragaria x ananassa HOM05D007590 ORTHO05D007875 4.3e-17 91.7 123 45.5
TAR374G1746 Trochodendron aralioides HOM05D007590 ORTHO05D007875 4.3e-17 91.7 122 46.7
RcHm_v2.0_Chr7g0194781 Rosa chinensis HOM05D007590 ORTHO05D007875 7.3e-17 90.9 125 44.8
FAN04G0970 Fragaria x ananassa HOM05D007590 ORTHO05D007875 9.6e-17 90.5 123 48.8
FAN08G0943 Fragaria x ananassa HOM05D007590 ORTHO05D007875 9.6e-17 90.5 123 49.6
Dinv38831 Davidia involucrata HOM05D005474 ORTHO05D006551 2.1e-16 89.4 122 44.3
TAR636G1032 Trochodendron aralioides HOM05D007590 ORTHO05D007875 4.8e-16 88.2 120 49.2
TAR629G2201 Trochodendron aralioides HOM05D007590 ORTHO05D007875 1.1e-15 87.0 122 50.8
Rhsim02G0243500 Rhododendron simsii HOM05D007590 ORTHO05D007875 1.4e-15 86.7 125 48.0
CiPaw.11G121300 Carya illinoinensis HOM05D007590 ORTHO05D007875 3.1e-15 85.5 122 45.1
QL02p030422 Quercus lobata HOM05D007590 ORTHO05D007875 5.3e-15 84.7 123 50.4
CiPaw.12G082900 Carya illinoinensis HOM05D007590 ORTHO05D007875 3.4e-14 82.0 123 43.9
Aqoxy5G04230 Aquilegia oxysepala HOM05D007590 ORTHO05D007875 5.8e-14 81.3 121 43.8
LjContig00312_ERROPOS870357g0000452 Lotus japonicus HOM05D007590 ORTHO05D007875 5.8e-14 81.3 123 43.1
Nitab4.5_0002782g0040 Nicotiana tabacum HOM05D007590 ORTHO05D007875 5.8e-14 81.3 113 44.2
PGSC0003DMG400012280 Solanum tuberosum HOM05D007590 ORTHO05D007875 1.3e-13 80.1 120 44.2
Sopen08g030630 Solanum pennellii HOM05D007590 ORTHO05D007875 1.7e-13 79.7 121 46.3
Solyc08g082370.1 Solanum lycopersicum HOM05D007590 ORTHO05D007875 2.9e-13 79.0 121 45.5
Nitab4.5_0001231g0140 Nicotiana tabacum HOM05D007590 ORTHO05D007875 4.9e-13 78.2 110 43.6
Sed0026863 Sechium edule HOM05D007590 ORTHO05D007875 4.9e-13 78.2 127 38.6
Sabra03G0101100 Salix brachista HOM05D007590 ORTHO05D007875 6.4e-13 77.8 113 46.9
Potri.001G091500 Populus trichocarpa HOM05D007590 ORTHO05D007875 8.4e-13 77.4 113 43.4
DCAR_006487 Daucus carota HOM05D007590 ORTHO05D007875 1.4e-12 76.6 131 45.0
Cc08_g16080 Coffea canephora HOM05D007590 ORTHO05D007875 1.9e-12 76.3 122 37.7
Lsat_1_v5_gn_6_83961 Lactuca sativa HOM05D007590 ORTHO05D007875 1.9e-12 76.3 124 40.3
CDE10G0927 Ceratophyllum demersum HOM05D007590 ORTHO05D007875 2.4e-12 75.9 115 41.7
Manes.02G009900 Manihot esculenta HOM05D007590 ORTHO05D007875 2.4e-12 75.9 127 44.9
CDE10G0175 Ceratophyllum demersum HOM05D007590 ORTHO05D007875 3.2e-12 75.5 115 40.0
Manes.02G010000 Manihot esculenta HOM05D007590 ORTHO05D007875 3.2e-12 75.5 127 45.7
MELO3C016294.2 Cucumis melo HOM05D007590 ORTHO05D007875 4.2e-12 75.1 70 48.6
AUR62019841 Chenopodium quinoa HOM05D007590 ORTHO05D007875 5.4e-12 74.7 124 43.5
CsaV3_4G006590 Cucumis sativus L. HOM05D007590 ORTHO05D007875 5.4e-12 74.7 114 48.2
Nn1g01873 Nelumbo nucifera HOM05D007590 ORTHO05D007875 5.4e-12 74.7 122 41.0
CSS0045762 Camellia sinensis var. sinensis HOM05D007590 ORTHO05D007875 7.1e-12 74.3 131 42.0
Actinidia22161 Actinidia chinensis HOM05D007590 ORTHO05D007875 9.3e-12 73.9 111 48.6
Peaxi162Scf00074g00097 Petunia axillaris HOM05D007590 ORTHO05D007875 1.6e-11 73.2 92 51.1
Potri.003G140100 Populus trichocarpa HOM05D007590 ORTHO05D007875 1.6e-11 73.2 113 43.4
Nn3g19015 Nelumbo nucifera HOM05D007590 ORTHO05D007875 2.7e-11 72.4 125 40.8
AUR62010841 Chenopodium quinoa HOM05D007590 ORTHO05D007875 3.5e-11 72.0 124 41.9
HanXRQChr03g0083501 Helianthus annuus HOM05D007590 ORTHO05D007875 6.0e-11 71.2 124 38.7
Ah.12g052560 Amaranthus hybridus HOM05D007590 ORTHO05D007875 1.0e-10 70.5 132 36.4
Lalb_Chr05g0211541 Lupinus albus HOM05D007590 ORTHO05D007875 1.0e-10 70.5 117 39.3
Duzib068G0682 Durio zibethinus HOM05D007590 ORTHO05D007875 1.3e-10 70.1 123 39.8
Sopen08g004200 Solanum pennellii HOM05D007590 ORTHO05D007875 1.3e-10 70.1 120 38.3
Thecc.03G298200 Theobroma cacao HOM05D007590 ORTHO05D007875 1.3e-10 70.1 131 35.9
ClCG07G011620 Citrullus lanatus HOM05D007590 ORTHO05D007875 1.8e-10 69.7 74 45.9
Gorai.008G254500 Gossypium raimondii HOM05D007590 ORTHO05D007875 1.8e-10 69.7 124 35.5
Peaxi162Scf00102g00178 Petunia axillaris HOM05D007590 ORTHO05D007875 1.8e-10 69.7 122 35.2
Gohir.D12G237700 Gossypium hirsutum HOM05D007590 ORTHO05D007875 2.3e-10 69.3 122 36.1
Gohir.D12G237966 Gossypium hirsutum HOM05D007590 ORTHO05D007875 2.3e-10 69.3 122 36.1
PGSC0003DMG400005790 Solanum tuberosum HOM05D007590 ORTHO05D007875 2.3e-10 69.3 120 39.2
EL10Ac5g12916 Beta vulgaris HOM05D007590 ORTHO05D007875 3.0e-10 68.9 88 48.9
Medtr5g009260 Medicago truncatula HOM05D007590 ORTHO05D007875 3.0e-10 68.9 114 38.6
Ciclev10022592m.g Citrus clementina HOM05D007590 ORTHO05D007875 3.9e-10 68.6 114 36.8
Duzib068G0902 Durio zibethinus HOM05D007590 ORTHO05D007875 6.7e-10 67.8 87 47.1
Gohir.A12G236500 Gossypium hirsutum HOM05D007590 ORTHO05D007875 6.7e-10 67.8 118 39.8
MSTRG.25673 Avicennia marina HOM05D007590 ORTHO05D007875 8.7e-10 67.4 123 43.9
Cpa.g.sc79.34 Carica papaya HOM05D007590 ORTHO05D007875 8.7e-10 67.4 127 37.8
Oeu063521.1 Olea europaea HOM05D007590 ORTHO05D007875 8.7e-10 67.4 121 36.4
Sabra01G0067900 Salix brachista HOM05D007590 ORTHO05D007875 8.7e-10 67.4 113 38.9
SGA_v2.0_scaffold305G47972 Striga asiatica HOM05D007590 ORTHO05D007875 8.7e-10 67.4 123 36.6
COL.COLO4_10703 Corchorus olitorius HOM05D007590 ORTHO05D007875 2.5e-09 65.9 86 45.3
Glyma.01G225600 Glycine max HOM05D007590 ORTHO05D007875 3.3e-09 65.5 119 37.0
SalBow1G4032 Salvia bowleyana HOM05D007590 ORTHO05D007875 4.3e-09 65.1 116 38.8
SalBow1G6340 Salvia bowleyana HOM05D007590 ORTHO05D007875 4.3e-09 65.1 116 38.8
Duzib084G0874 Durio zibethinus HOM05D007590 ORTHO05D007875 5.6e-09 64.7 86 45.3
Haze_09063 Corylus avellana HOM05D007590 ORTHO05D007875 7.4e-09 64.3 73 60.3
MSTRG.11924 Avicennia marina HOM05D007590 ORTHO05D007875 1.3e-08 63.5 119 36.1
Gohir.A02G100200 Gossypium hirsutum HOM05D007590 ORTHO05D007875 1.3e-08 63.5 113 37.2
Sed0003477 Sechium edule HOM05D007590 ORTHO05D007875 1.3e-08 63.5 75 41.3
Phvul.002G164500 Phaseolus vulgaris HOM05D007590 ORTHO05D007875 1.6e-08 63.2 119 34.5
TPR.G25602 Trifolium pratense HOM05D007590 ORTHO05D007875 3.7e-08 62.0 119 35.3
Ca_24513_v3 Cicer arietinum L. HOM05D007590 ORTHO05D007875 6.2e-08 61.2 117 35.9
Ca_29733_v3 Cicer arietinum L. HOM05D007590 ORTHO05D007875 6.2e-08 61.2 117 35.9
ATR0602G105 Amborella trichopoda HOM05D007590 ORTHO05D007875 8.1e-08 60.8 130 30.8
Gohir.D03G083700 Gossypium hirsutum HOM05D007590 ORTHO05D007875 1.1e-07 60.5 94 43.6
Duzib205G1174 Durio zibethinus HOM05D007590 ORTHO05D007875 2.4e-07 59.3 117 37.6
Manes.01G049200 Manihot esculenta HOM05D007590 ORTHO05D007875 2.4e-07 59.3 111 38.7
Carub.0002s0036 Capsella rubella HOM05D010600 ORTHO05D007875 3.1e-07 58.9 125 36.0
Gorai.003G079000 Gossypium raimondii HOM05D007590 ORTHO05D007875 4.0e-07 58.5 86 45.3
Gohir.A02G100100 Gossypium hirsutum HOM05D007590 ORTHO05D007875 5.3e-07 58.2 70 50.0
Glyma.11G017400 Glycine max HOM05D007590 ORTHO05D007875 6.9e-07 57.8 82 41.5
BcaB07g31500 Brassica carinata HOM05D010600 ORTHO05D007875 1.2e-06 57.0 125 34.4
BcaC04g22619 Brassica carinata HOM05D010600 ORTHO05D007875 1.5e-06 56.6 125 33.6
A09p14360 Brassica napus HOM05D010600 ORTHO05D007875 1.5e-06 56.6 125 34.4
BolC9t54630H Brassica oleracea HOM05D010600 ORTHO05D007875 1.5e-06 56.6 125 32.8
BraA09t37083Z Brassica rapa HOM05D010600 ORTHO05D007875 1.5e-06 56.6 125 34.4
CiPaw.12G082700 Carya illinoinensis HOM05D007590 ORTHO05D007875 1.5e-06 56.6 123 38.2
Lsat_1_v5_gn_3_10720 Lactuca sativa HOM05D007590 ORTHO05D007875 1.5e-06 56.6 115 43.5
C09p17280 Brassica napus HOM05D010600 ORTHO05D007875 2.6e-06 55.8 125 33.6
PGR031G2453 Punica granatum HOM05D007590 ORTHO05D007875 2.6e-06 55.8 123 39.0
TWI60G0225 Tripterygium wilfordii HOM05D007590 ORTHO05D007875 2.6e-06 55.8 123 36.6
C09p17810 Brassica napus HOM05D010600 ORTHO05D007875 3.4e-06 55.5 128 35.2
BolC9t54679H Brassica oleracea HOM05D010600 ORTHO05D007875 3.4e-06 55.5 128 35.2
BcaB07g31463 Brassica carinata HOM05D010600 ORTHO05D007875 4.5e-06 55.1 128 34.4
Migut.A00642 Erythranthe guttata HOM05D007590 ORTHO05D007875 7.6e-06 54.3 113 34.5
Sp2g00320 Schrenkiella parvula HOM05D010600 ORTHO05D007875 1.0e-05 53.9 129 34.9


User provided reference genes

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