Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G0800 Cannabis sativa HOM05D001338 ORTHO05D001239 2.5e-102 375.6 206 100.0
CANSAT11G1935 Cannabis sativa HOM05D001338 ORTHO05D001239 1.9e-97 359.4 205 90.2
CANSAT35G0728 Cannabis sativa HOM05D001338 ORTHO05D001239 2.7e-88 328.9 188 89.9
CANSAT46G0001 Cannabis sativa HOM05D001338 ORTHO05D001239 9.3e-81 303.9 205 85.4
CANSAT01G1009 Cannabis sativa HOM05D001338 ORTHO05D001239 2.7e-64 249.2 198 73.7
Medtr4g010145 Medicago truncatula HOM05D001338 ORTHO05D016692 1.7e-53 213.4 125 76.8
Medtr5g056540 Medicago truncatula HOM05D001338 ORTHO05D001239 8.0e-48 194.5 140 65.0
AUR62026124 Chenopodium quinoa HOM05D001338 ORTHO05D001239 1.5e-41 173.7 138 55.8
FvH4_4g01531 Fragaria vesca HOM05D001338 ORTHO05D001239 8.8e-39 164.5 144 54.9
ECA236G1638 Erigeron canadensis HOM05D001338 ORTHO05D001239 5.7e-38 161.8 158 50.6
ECA232G0049 Erigeron canadensis HOM05D001338 ORTHO05D001239 1.8e-36 156.8 118 59.3
HanXRQChr10g0286761 Helianthus annuus HOM05D001338 ORTHO05D001239 3.1e-36 156.0 117 58.1
BolC2t08893H Brassica oleracea HOM05D001338 ORTHO05D001239 3.7e-29 132.5 156 42.9
FvH4_6g47642 Fragaria vesca HOM05D001338 ORTHO05D001239 8.3e-29 131.3 117 52.1
PSO210G1522 Papaver somniferum HOM05D001338 ORTHO05D001239 2.4e-28 129.8 139 46.0
FvH4_1g08761 Fragaria vesca HOM05D001338 ORTHO05D001239 7.0e-28 128.3 124 50.0
AUR62037832 Chenopodium quinoa HOM05D001338 ORTHO05D001239 9.2e-28 127.9 104 63.5
FvH4_5g30891 Fragaria vesca HOM05D001338 ORTHO05D001239 2.7e-27 126.3 124 49.2
TWI31G0800 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.0e-26 124.4 139 45.3
RcHm_v2.0_Chr7g0198811 Rosa chinensis HOM05D001338 ORTHO05D001239 2.3e-26 123.2 164 42.1
TWI31G1167 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 2.9e-26 122.9 139 45.3
Zm00001eb077850 Zea mays HOM05D001338 ORTHO05D001239 3.8e-26 122.5 149 43.6
Oeu012605.1 Olea europaea HOM05D001338 ORTHO05D001239 6.6e-26 121.7 160 39.4
TWI74G0957 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.5e-25 120.6 139 44.6
Zm00001eb027500 Zea mays HOM05D001338 ORTHO05D001239 4.3e-25 119.0 158 40.5
Oeu003234.1 Olea europaea HOM05D001338 ORTHO05D001239 5.6e-25 118.6 158 39.9
PSO063G4296 Papaver somniferum HOM05D001338 ORTHO05D001239 5.6e-25 118.6 137 46.7
Zm00001eb237490 Zea mays HOM05D001338 ORTHO05D001239 9.5e-25 117.9 149 38.9
MD02G1227000 Malus domestica HOM05D000696 ORTHO05D001239 2.1e-24 116.7 126 44.4
RcHm_v2.0_Chr6g0308901 Rosa chinensis HOM05D001338 ORTHO05D001239 2.1e-24 116.7 81 61.7
CANSAT21G0118 Cannabis sativa HOM05D001338 ORTHO05D001239 4.7e-24 115.5 147 46.3
CANSAT21G2437 Cannabis sativa HOM05D001338 ORTHO05D001239 4.7e-24 115.5 147 46.3
TWI18G0851 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 6.1e-24 115.2 139 43.2
PSO724G1235 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-23 114.0 133 45.9
CANSAT54G1040 Cannabis sativa HOM05D001338 ORTHO05D001239 4.0e-23 112.5 119 47.1
CSS0027088 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 5.2e-23 112.1 139 44.6
RcHm_v2.0_Chr7g0230921 Rosa chinensis HOM05D001338 ORTHO05D029707 6.8e-23 111.7 139 43.9
PSO063G3812 Papaver somniferum HOM05D001338 ORTHO05D001239 1.5e-22 110.5 118 46.6
PSO832G0837 Papaver somniferum HOM05D001338 ORTHO05D001239 2.0e-22 110.2 149 42.3
CSS0006650 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 4.4e-22 109.0 152 42.1
CSS0047876 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 4.4e-22 109.0 146 42.5
PSO832G0893 Papaver somniferum HOM05D001338 ORTHO05D001239 7.5e-22 108.2 130 40.8
HanXRQChr11g0321041 Helianthus annuus HOM05D001338 ORTHO05D001239 2.2e-21 106.7 118 39.8
Oeu008700.1 Olea europaea HOM05D001338 ORTHO05D001239 2.9e-21 106.3 122 42.6
PSO339G3749 Papaver somniferum HOM05D001338 ORTHO05D001239 2.9e-21 106.3 159 41.5
PSO478G0891 Papaver somniferum HOM05D001338 ORTHO05D001239 2.9e-21 106.3 148 41.2
PSO761G0174 Papaver somniferum HOM05D001338 ORTHO05D001239 3.7e-21 105.9 148 40.5
Oeu028129.1 Olea europaea HOM05D001338 ORTHO05D001239 4.9e-21 105.5 137 39.4
PSO017G0847 Papaver somniferum HOM05D001338 ORTHO05D001239 4.9e-21 105.5 147 41.5
AL4G20870 Arabidopsis lyrata HOM05D001338 ORTHO05D001239 6.4e-21 105.1 122 45.1
AT4G10200 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 6.4e-21 105.1 164 39.0
CANSAT64G1081 Cannabis sativa HOM05D001338 ORTHO05D001239 8.3e-21 104.8 119 44.5
MD01G1087700 Malus domestica HOM05D001113 ORTHO05D000968 8.3e-21 104.8 107 45.8
Thhalv10009736m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 1.1e-20 104.4 140 41.4
PSO781G0216 Papaver somniferum HOM05D001338 ORTHO05D001239 1.1e-20 104.4 137 42.3
Thhalv10009558m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 1.4e-20 104.0 140 41.4
Oeu063768.1 Olea europaea HOM05D001338 ORTHO05D001239 1.4e-20 104.0 122 42.6
PSO210G5802 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-20 104.0 117 44.4
Sp4g09900 Schrenkiella parvula HOM05D001338 ORTHO05D001239 1.4e-20 104.0 150 41.3
Oeu016868.1 Olea europaea HOM05D001338 ORTHO05D001239 1.8e-20 103.6 138 39.1
PSO541G2490 Papaver somniferum HOM05D001338 ORTHO05D001239 1.8e-20 103.6 128 43.0
Aqoxy5G02339 Aquilegia oxysepala HOM05D001338 ORTHO05D001239 2.4e-20 103.2 120 39.2
Oeu063134.1 Olea europaea HOM05D001338 ORTHO05D001239 3.2e-20 102.8 111 45.0
PSO104G0173 Papaver somniferum HOM05D001338 ORTHO05D001239 3.2e-20 102.8 145 40.7
Oeu056073.1 Olea europaea HOM05D001338 ORTHO05D001239 4.1e-20 102.4 123 43.1
AUR62018245 Chenopodium quinoa HOM05D002760 ORTHO05D003169 7.0e-20 101.7 66 71.2
PSO170G1703 Papaver somniferum HOM05D001338 ORTHO05D001239 9.2e-20 101.3 148 39.9
PSO170G2214 Papaver somniferum HOM05D001338 ORTHO05D001239 9.2e-20 101.3 116 44.0
PSO541G2431 Papaver somniferum HOM05D001338 ORTHO05D001239 1.2e-19 100.9 139 38.8
PSO063G6584 Papaver somniferum HOM05D001338 ORTHO05D001239 2.0e-19 100.1 157 39.5
Glyma.12G093566 Glycine max HOM05D001338 ORTHO05D001239 2.7e-19 99.8 100 47.0
PSO478G4662 Papaver somniferum HOM05D001338 ORTHO05D001239 2.7e-19 99.8 152 41.4
PSO063G7197 Papaver somniferum HOM05D001338 ORTHO05D001239 3.5e-19 99.4 158 39.9
PSO063G4981 Papaver somniferum HOM05D001338 ORTHO05D001239 4.6e-19 99.0 152 41.4
PSO210G0436 Papaver somniferum HOM05D001338 ORTHO05D001239 6.0e-19 98.6 121 43.0
Zm00001eb109540 Zea mays HOM05D001338 ORTHO05D001239 6.0e-19 98.6 127 41.7
Zm00001eb123550 Zea mays HOM05D001338 ORTHO05D001239 6.0e-19 98.6 127 41.7
Zm00001eb125380 Zea mays HOM05D001338 ORTHO05D001239 6.0e-19 98.6 127 41.7
Zm00001eb152380 Zea mays HOM05D001338 ORTHO05D001239 6.0e-19 98.6 127 41.7
PSO478G1760 Papaver somniferum HOM05D001338 ORTHO05D001239 7.8e-19 98.2 152 41.4
PSO764G0071 Papaver somniferum HOM05D001338 ORTHO05D001239 7.8e-19 98.2 152 40.8
PSO144G0149 Papaver somniferum HOM05D001338 ORTHO05D001239 1.3e-18 97.4 152 40.8
PSO832G4176 Papaver somniferum HOM05D001338 ORTHO05D001239 1.3e-18 97.4 152 40.8
PSO478G0790 Papaver somniferum HOM05D001338 ORTHO05D001239 1.7e-18 97.1 158 39.2
FvH4_2g32571 Fragaria vesca HOM05D001338 ORTHO05D001239 2.3e-18 96.7 117 39.3
CSS0005716 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 6.6e-18 95.1 102 46.1
Oeu042321.2 Olea europaea HOM05D001338 ORTHO05D001239 6.6e-18 95.1 122 39.3
Oeu054316.1 Olea europaea HOM05D001338 ORTHO05D001239 8.6e-18 94.7 138 37.0
PSO541G0488 Papaver somniferum HOM05D001338 ORTHO05D001239 8.6e-18 94.7 155 35.5
Gohir.D06G166250 Gossypium hirsutum HOM05D001338 ORTHO05D001239 1.5e-17 94.0 119 41.2
PSO675G8898 Papaver somniferum HOM05D001338 ORTHO05D001239 1.5e-17 94.0 149 34.9
TWI73G0975 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 2.5e-17 93.2 139 38.8
PSO384G1931 Papaver somniferum HOM05D001338 ORTHO05D001239 3.3e-17 92.8 145 35.9
PSO541G1638 Papaver somniferum HOM05D001338 ORTHO05D001239 4.3e-17 92.4 149 33.6
TPR.G34669 Trifolium pratense HOM05D001338 ORTHO05D001239 7.3e-17 91.7 136 39.7
PSO138G0010 Papaver somniferum HOM05D001338 ORTHO05D001239 1.2e-16 90.9 96 44.8
PSO384G4132 Papaver somniferum HOM05D001338 ORTHO05D001239 1.2e-16 90.9 149 34.2
PSO801G0680 Papaver somniferum HOM05D001338 ORTHO05D001239 1.2e-16 90.9 149 34.9
PSO063G1472 Papaver somniferum HOM05D001338 ORTHO05D001239 1.6e-16 90.5 151 36.4
CARHR103200 Cardamine hirsuta HOM05D001338 ORTHO05D001239 2.1e-16 90.1 168 35.7
Gohir.A06G101504 Gossypium hirsutum HOM05D001338 ORTHO05D001239 2.1e-16 90.1 171 33.9
PSO541G5408 Papaver somniferum HOM05D001338 ORTHO05D001239 2.1e-16 90.1 104 45.2
Glyma.14G107400 Glycine max HOM05D001338 ORTHO05D001239 3.6e-16 89.4 157 36.3
Thhalv10017956m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 1.1e-15 87.8 113 39.8
Oeu048409.1 Olea europaea HOM05D001338 ORTHO05D001239 1.1e-15 87.8 115 40.9
Oeu053421.1 Olea europaea HOM05D001338 ORTHO05D001239 1.4e-15 87.4 111 42.3
PSO421G0097 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-15 87.4 201 34.8
PSO781G0133 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-15 87.4 115 40.0
Oeu029248.1 Olea europaea HOM05D001338 ORTHO05D001239 1.8e-15 87.0 107 43.0
PSO478G0924 Papaver somniferum HOM05D001338 ORTHO05D001239 5.2e-15 85.5 145 38.6
FvH4_1g10851 Fragaria vesca HOM05D001338 ORTHO05D001239 6.8e-15 85.1 117 37.6
PSO724G0974 Papaver somniferum HOM05D001338 ORTHO05D001239 2.6e-14 83.2 147 32.0
TPR.G17453 Trifolium pratense HOM05D001338 ORTHO05D001239 3.4e-14 82.8 52 67.3
TPR.G25675 Trifolium pratense HOM05D000006 ORTHO05D000001 1.3e-13 80.9 47 72.3
PSO801G0142 Papaver somniferum HOM05D001338 ORTHO05D001239 2.9e-13 79.7 201 29.9
Oeu063541.1 Olea europaea HOM05D001338 ORTHO05D001239 1.1e-12 77.8 82 45.1
Zm00001eb204510 Zea mays HOM05D001338 ORTHO05D001239 7.0e-12 75.1 58 55.2
Oeu023192.1 Olea europaea HOM05D001338 ORTHO05D001239 1.2e-11 74.3 69 44.9
TWI81G1066 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 7.8e-11 71.6 63 47.6
PSO210G4276 Papaver somniferum HOM05D001338 ORTHO05D001239 5.0e-10 68.9 67 41.8
PSO782G2576 Papaver somniferum HOM05D001338 ORTHO05D001239 6.6e-10 68.6 83 43.4
PSO384G2104 Papaver somniferum HOM05D001338 ORTHO05D001239 8.6e-10 68.2 67 43.3
TWI74G0662 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 2.5e-09 66.6 118 33.9
Oeu005280.1 Olea europaea HOM05D001338 ORTHO05D001239 3.3e-09 66.2 92 38.0
Oeu064839.1 Olea europaea HOM05D001338 ORTHO05D001239 3.3e-09 66.2 61 49.2
Oeu034167.1 Olea europaea HOM05D001338 ORTHO05D001239 2.1e-08 63.5 90 40.0
PSO461G0028 Papaver somniferum HOM05D001338 ORTHO05D001239 2.3e-07 60.1 120 32.5
CiPaw.04G075300 Carya illinoinensis HOM05D001338 ORTHO05D001239 4.0e-07 59.3 107 38.3
Medtr7g063340 Medicago truncatula HOM05D001338 ORTHO05D001239 4.0e-07 59.3 48 56.2
Oeu012998.1 Olea europaea HOM05D001338 ORTHO05D001239 5.2e-07 58.9 54 46.3
FvH4_7g07902 Fragaria vesca HOM05D001338 ORTHO05D001239 6.8e-07 58.5 95 38.9
CiPaw.15G122600 Carya illinoinensis HOM05D001338 ORTHO05D001239 2.6e-06 56.6 88 37.5
Oeu037760.1 Olea europaea HOM05D001338 ORTHO05D001239 5.8e-06 55.5 118 29.7
Oeu052557.1 Olea europaea HOM05D001338 ORTHO05D001239 7.5e-06 55.1 54 42.6


User provided reference genes

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