Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G0124 Cannabis sativa HOM05D009267 ORTHO05D010384 1.4e-107 392.9 194 100.0
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.8e-33 146.7 146 46.6
CANSAT01G2441 Cannabis sativa HOM05D009267 ORTHO05D010384 6.0e-21 105.1 163 32.5
CANSAT25G2360 Cannabis sativa HOM05D009267 ORTHO05D010384 1.0e-20 104.4 141 34.8
CANSAT80G2414 Cannabis sativa HOM05D009267 ORTHO05D010384 1.3e-20 104.0 141 34.8
CiPaw.15G013500 Carya illinoinensis HOM05D009267 ORTHO05D010384 3.1e-17 92.8 132 34.1
CiPaw.01G054700 Carya illinoinensis HOM05D009267 ORTHO05D010384 4.0e-17 92.4 132 34.1
CiPaw.15G057000 Carya illinoinensis HOM05D009267 ORTHO05D010384 4.0e-17 92.4 132 34.1
CiPaw.09G042900 Carya illinoinensis HOM05D009267 ORTHO05D010384 5.2e-17 92.0 132 34.1
CiPaw.15G116600 Carya illinoinensis HOM05D000096 ORTHO05D010384 5.2e-17 92.0 132 34.1
CiPaw.07G195700 Carya illinoinensis HOM05D009267 ORTHO05D010384 1.2e-16 90.9 132 33.3
CiPaw.07G170300 Carya illinoinensis HOM05D009267 ORTHO05D010384 4.4e-16 89.0 109 37.6
CANSAT01G1576 Cannabis sativa HOM05D009267 ORTHO05D010384 2.7e-13 79.7 118 33.9
CANSAT11G1890 Cannabis sativa HOM05D009267 ORTHO05D010384 1.3e-12 77.4 118 33.9
Haze_01485 Corylus avellana HOM05D006612 ORTHO05D010384 1.7e-12 77.0 113 38.9
CiPaw.13G021400 Carya illinoinensis HOM05D009267 ORTHO05D010384 8.7e-12 74.7 90 37.8
CiPaw.07G195500 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.5e-11 73.2 90 37.8
Atru.chr12.1651 Acer truncatum HOM05D000096 ORTHO05D000045 9.6e-11 71.2 126 30.2
Atru.chr3.2966 Acer truncatum HOM05D008860 ORTHO05D010619 6.2e-10 68.6 138 28.3
Atru.chr8.1160 Acer truncatum HOM05D006612 ORTHO05D010384 1.8e-09 67.0 91 38.5
CANSAT54G0236 Cannabis sativa HOM05D009267 ORTHO05D010384 1.8e-09 67.0 79 43.0
TAR369G0863 Trochodendron aralioides HOM05D000674 ORTHO05D001490 3.1e-09 66.2 89 36.0
EL10Ac6g15055 Beta vulgaris HOM05D000096 ORTHO05D000045 5.3e-09 65.5 112 32.1
Dinv38786 Davidia involucrata HOM05D006409 ORTHO05D008250 6.9e-09 65.1 134 27.6
CiPaw.05G162200 Carya illinoinensis HOM05D009267 ORTHO05D010384 1.2e-08 64.3 85 36.5
Dinv03711 Davidia involucrata HOM05D006612 ORTHO05D010384 1.2e-08 64.3 92 31.5
Oeu027742.1 Olea europaea HOM05D008860 ORTHO05D010619 1.2e-08 64.3 91 36.3
Dinv10520 Davidia involucrata HOM05D000824 ORTHO05D010384 1.5e-08 63.9 130 26.2
Dinv26739 Davidia involucrata HOM05D000824 ORTHO05D010384 2.0e-08 63.5 130 26.2
EL10Ac1g02309 Beta vulgaris HOM05D003315 ORTHO05D003407 5.8e-08 62.0 172 28.5
Dinv06234 Davidia involucrata HOM05D006612 ORTHO05D010384 5.8e-08 62.0 95 34.7
Dinv08483 Davidia involucrata HOM05D006612 ORTHO05D010384 9.9e-08 61.2 130 26.2
CSS0015794 Camellia sinensis var. sinensis HOM05D008336 ORTHO05D010619 1.3e-07 60.8 123 27.6
CANSAT35G1361 Cannabis sativa HOM05D009267 ORTHO05D010384 1.3e-07 60.8 83 31.3
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 1.1e-06 57.8 146 26.7
Rhsim08G0049800 Rhododendron simsii HOM05D023805 ORTHO05D010384 2.4e-06 56.6 144 27.1
SGA_v2.0_scaffold10G05328 Striga asiatica HOM05D006612 ORTHO05D009014 2.4e-06 56.6 129 28.7
CANSAT35G1516 Cannabis sativa HOM05D009267 ORTHO05D010384 3.2e-06 56.2 80 35.0
Nitab4.5_0026419g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.2e-06 56.2 131 24.4
Cc04_g13910 Coffea canephora HOM05D006612 ORTHO05D009014 5.4e-06 55.5 152 28.3
Nitab4.5_0000992g0110 Nicotiana tabacum HOM05D002441 ORTHO05D002376 5.4e-06 55.5 131 24.4


User provided reference genes

Program Settings