Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G1989 Cannabis sativa HOM05D007269 ORTHO05D008531 8.2e-113 410.6 238 100.0
QL03p051584 Quercus lobata HOM05D007269 ORTHO05D008531 5.2e-35 152.1 239 43.9
Potri.001G059800 Populus trichocarpa HOM05D007269 ORTHO05D008531 6.8e-35 151.8 241 42.7
Manes.13G008500 Manihot esculenta HOM05D007269 ORTHO05D008531 2.2e-33 146.7 251 45.4
CiPaw.06G105600 Carya illinoinensis HOM05D007269 ORTHO05D008531 1.9e-32 143.7 262 41.2
Thecc.02G201200 Theobroma cacao HOM05D007269 ORTHO05D008531 1.0e-30 137.9 266 39.5
CiPaw.05G106700 Carya illinoinensis HOM05D007269 ORTHO05D008531 1.7e-30 137.1 255 40.8
MD16G1123500 Malus domestica HOM05D007269 ORTHO05D008531 6.6e-30 135.2 251 46.2
PGR119G1209 Punica granatum HOM05D007269 ORTHO05D008531 6.2e-28 128.6 236 39.4
CSS0016059 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 3.1e-27 126.3 247 41.3
Manes.12G008000 Manihot esculenta HOM05D007269 ORTHO05D008531 3.1e-27 126.3 229 40.6
Aqoxy3G01626 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 4.4e-26 122.5 239 40.6
Nn4g22252 Nelumbo nucifera HOM05D007269 ORTHO05D008531 7.6e-26 121.7 239 38.9
Sabra03G0123300 Salix brachista HOM05D007269 ORTHO05D008531 1.7e-25 120.6 234 38.9
Ciclev10032794m.g Citrus clementina HOM05D007269 ORTHO05D008531 7.1e-24 115.2 229 38.0
Prupe.1G222200 Prunus persica HOM05D007269 ORTHO05D008531 2.1e-23 113.6 247 39.7
Aqoxy5G03286 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 3.5e-23 112.8 226 36.7
Potri.015G099800 Populus trichocarpa HOM05D007269 ORTHO05D008531 2.3e-22 110.2 215 39.1
TAR374G0918 Trochodendron aralioides HOM05D007269 ORTHO05D008531 5.1e-22 109.0 146 48.6
RcHm_v2.0_Chr4g0429751 Rosa chinensis HOM05D007269 ORTHO05D008531 8.7e-22 108.2 252 35.7
FvH4_4g23360 Fragaria vesca HOM05D007269 ORTHO05D008531 2.1e-20 103.6 276 33.0
QL10p002347 Quercus lobata HOM05D007269 ORTHO05D008531 2.1e-20 103.6 216 36.6
Thecc.03G133000 Theobroma cacao HOM05D007269 ORTHO05D008531 2.8e-20 103.2 233 36.1
FAN12G4201 Fragaria x ananassa HOM05D007269 ORTHO05D008531 4.8e-20 102.4 253 32.8
Sabra15G0120500 Salix brachista HOM05D007269 ORTHO05D008531 4.8e-20 102.4 210 37.1
Potri.003G168200 Populus trichocarpa HOM05D007269 ORTHO05D008531 6.2e-20 102.1 156 45.5
TAR622G0366 Trochodendron aralioides HOM05D007269 ORTHO05D008531 2.4e-19 100.1 210 41.4
CSS0011599 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 3.1e-19 99.8 234 36.3
Nn3g16393 Nelumbo nucifera HOM05D007269 ORTHO05D008531 3.1e-19 99.8 244 37.7
Cc11_g17250 Coffea canephora HOM05D007269 ORTHO05D008531 4.0e-19 99.4 259 35.5
FAN17G1902 Fragaria x ananassa HOM05D007269 ORTHO05D008531 5.3e-19 99.0 243 33.3
ATR0582G094 Amborella trichopoda HOM05D007269 ORTHO05D008531 6.9e-19 98.6 239 33.5
COL.COLO4_36213 Corchorus olitorius HOM05D007269 ORTHO05D008531 1.5e-18 97.4 232 35.3
Migut.M01219 Erythranthe guttata HOM05D007269 ORTHO05D008531 2.0e-18 97.1 231 37.2
PSO017G6998 Papaver somniferum HOM05D007269 ORTHO05D008531 2.0e-18 97.1 237 33.8
MSTRG.7284 Avicennia marina HOM05D007269 ORTHO05D008531 3.4e-18 96.3 240 35.4
Gohir.A01G022800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 9.9e-18 94.7 287 39.0
Gorai.002G023300 Gossypium raimondii HOM05D007269 ORTHO05D008531 2.9e-17 93.2 282 34.8
Sabra12G0074700 Salix brachista HOM05D001095 ORTHO05D000976 3.8e-17 92.8 234 32.9
Cfa009391 Carpinus fangiana HOM05D007269 ORTHO05D008531 8.4e-17 91.7 188 40.4
Potri.012G101800 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.4e-16 90.9 213 34.7
Gohir.D01G020800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 2.4e-16 90.1 280 36.1
Duzib068G0517 Durio zibethinus HOM05D007269 ORTHO05D008531 4.2e-16 89.4 234 32.9
Ciclev10032833m.g Citrus clementina HOM05D007269 ORTHO05D008531 5.4e-16 89.0 218 30.3
Duzib084G1105 Durio zibethinus HOM05D007269 ORTHO05D008531 9.3e-16 88.2 233 31.3
Atru.chr6.1845 Acer truncatum HOM05D007269 ORTHO05D008531 3.0e-14 83.2 224 32.6
Manes.14G048800 Manihot esculenta HOM05D007269 ORTHO05D008531 5.1e-14 82.4 217 32.3
CiPaw.11G004900 Carya illinoinensis HOM05D007269 ORTHO05D008531 8.7e-14 81.6 238 31.5
Lsat_1_v5_gn_4_82360 Lactuca sativa HOM05D007269 ORTHO05D008531 8.7e-14 81.6 213 29.1
MBI07_g46909_MAGBIO Magnolia biondii HOM05D007269 ORTHO05D008531 8.7e-14 81.6 248 36.7
Oeu001326.1 Olea europaea HOM05D007269 ORTHO05D008531 1.9e-13 80.5 218 31.7
Oeu001327.1 Olea europaea HOM05D007269 ORTHO05D008531 1.9e-13 80.5 218 31.7
PSO017G1627 Papaver somniferum HOM05D007269 ORTHO05D008531 3.3e-13 79.7 183 35.0
Nitab4.5_0000021g1020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 7.4e-13 78.6 239 31.4
Gorai.008G207700 Gossypium raimondii HOM05D007269 ORTHO05D008531 2.1e-12 77.0 218 31.2
HanXRQChr09g0273431 Helianthus annuus HOM05D007269 ORTHO05D008531 2.1e-12 77.0 215 28.8
Nitab4.5_0002530g0020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 2.8e-12 76.6 233 31.3
Gohir.D12G192900 Gossypium hirsutum HOM05D007269 ORTHO05D008531 3.7e-12 76.3 229 30.6
HanXRQChr08g0236471 Helianthus annuus HOM05D007269 ORTHO05D008531 6.2e-12 75.5 218 30.3
Oeu001328.1 Olea europaea HOM05D007269 ORTHO05D008531 8.1e-12 75.1 288 28.1
Sc22g0003750 Simmondsia chinensis HOM05D007269 ORTHO05D008531 1.4e-11 74.3 85 48.2
Migut.K01007 Erythranthe guttata HOM05D007269 ORTHO05D008531 3.1e-11 73.2 234 30.3
Gohir.A12G190800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 5.3e-11 72.4 218 30.3
HanXRQChr05g0153821 Helianthus annuus HOM05D007269 ORTHO05D008531 6.9e-11 72.0 225 30.7
DCAR_021637 Daucus carota HOM05D007269 ORTHO05D008531 1.5e-10 70.9 247 27.5
Lalb_Chr07g0183561 Lupinus albus HOM05D007269 ORTHO05D008531 1.5e-10 70.9 226 30.5
Cpa.g.sc4.165 Carica papaya HOM05D007269 ORTHO05D008531 3.4e-10 69.7 210 31.0
Solyc03g097430.1 Solanum lycopersicum HOM05D007269 ORTHO05D008531 7.6e-10 68.6 243 30.5
RcHm_v2.0_Chr7g0189701 Rosa chinensis HOM05D007269 ORTHO05D008531 2.2e-09 67.0 217 33.2
CAN.G732.21 Capsicum annuum HOM05D007269 ORTHO05D008531 2.9e-09 66.6 245 26.1
Haze_07172 Corylus avellana HOM05D007269 ORTHO05D008531 6.4e-09 65.5 205 32.2
Prupe.5G148200 Prunus persica HOM05D007269 ORTHO05D008531 6.4e-09 65.5 229 27.9
FAN08G0669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 8.4e-09 65.1 214 29.4
Lalb_Chr13g0297191 Lupinus albus HOM05D007269 ORTHO05D008531 8.4e-09 65.1 226 28.8
Cfa018768 Carpinus fangiana HOM05D007269 ORTHO05D008531 1.1e-08 64.7 200 31.5
MD06G1137900 Malus domestica HOM05D007269 ORTHO05D008531 4.2e-08 62.8 225 29.8
Os12g0460100 Oryza sativa ssp. japonica HOM05D007269 ORTHO05D008531 4.2e-08 62.8 209 28.2
Phvul.002G285300 Phaseolus vulgaris HOM05D007269 ORTHO05D008531 4.2e-08 62.8 224 25.0
TPR.G28777 Trifolium pratense HOM05D007269 ORTHO05D008531 9.3e-08 61.6 223 34.1
Sopen03g028190 Solanum pennellii HOM05D007269 ORTHO05D008531 1.2e-07 61.2 233 27.9
PGSC0003DMG400026484 Solanum tuberosum HOM05D007269 ORTHO05D008531 1.2e-07 61.2 244 26.6
TWI18G0336 Tripterygium wilfordii HOM05D000350 ORTHO05D000228 1.6e-07 60.8 124 38.7
FvH4_5g08680 Fragaria vesca HOM05D007269 ORTHO05D008531 2.1e-07 60.5 222 28.8
FAN18G2199 Fragaria x ananassa HOM05D007269 ORTHO05D008531 2.1e-07 60.5 222 28.8
FAN28G2669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 2.1e-07 60.5 222 28.8
FAN06G3947 Fragaria x ananassa HOM05D007269 ORTHO05D008531 2.7e-07 60.1 220 28.6
ECA232G3539 Erigeron canadensis HOM05D007269 ORTHO05D008531 4.6e-07 59.3 138 29.7
FAN13G1779 Fragaria x ananassa HOM05D007269 ORTHO05D008531 7.9e-07 58.5 235 29.8
MD14G1153300 Malus domestica HOM05D007269 ORTHO05D008531 1.3e-06 57.8 232 26.3
Rhsim12G0023500 Rhododendron simsii HOM05D007269 ORTHO05D008531 1.3e-06 57.8 182 31.9
MBI07_g27870_MAGBIO Magnolia biondii HOM05D007269 ORTHO05D008531 1.8e-06 57.4 175 38.3
DCAR_021638 Daucus carota HOM05D007269 ORTHO05D008531 2.3e-06 57.0 247 23.9
Sabra01G0042900 Salix brachista HOM05D007269 ORTHO05D008531 3.9e-06 56.2 77 48.1
Oeu012652.1 Olea europaea HOM05D007269 ORTHO05D008531 5.1e-06 55.8 134 35.8
Psat7g036960 Pisum sativum HOM05D007269 ORTHO05D008531 5.1e-06 55.8 229 25.8


User provided reference genes

Program Settings