Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G1515 Cannabis sativa HOM05D006110 ORTHO05D007774 7.9e-94 347.1 170 100.0
RcHm_v2.0_Chr1g0327151 Rosa chinensis HOM05D006110 ORTHO05D007774 2.4e-58 229.2 108 94.4
FAN03G2625 Fragaria x ananassa HOM05D006110 ORTHO05D007774 4.1e-58 228.4 108 95.4
FvH4_7g03810 Fragaria vesca HOM05D006110 ORTHO05D007774 2.7e-57 225.7 108 93.5
FAN06G2813 Fragaria x ananassa HOM05D006110 ORTHO05D007774 2.7e-57 225.7 108 93.5
CANSAT56G0825 Cannabis sativa HOM05D006110 ORTHO05D007774 5.9e-57 224.6 113 92.9
TPR.G1403 Trifolium pratense HOM05D006110 ORTHO05D007774 5.9e-57 224.6 108 92.6
FAN10G4343 Fragaria x ananassa HOM05D006110 ORTHO05D007774 1.7e-56 223.0 108 92.6
TPR.G7074 Trifolium pratense HOM05D006110 ORTHO05D007774 2.9e-56 222.2 108 91.7
Psat5g221960 Pisum sativum HOM05D006110 ORTHO05D007774 3.8e-56 221.9 108 90.7
Cc00_g06110 Coffea canephora HOM05D006110 ORTHO05D007774 5.0e-56 221.5 108 89.8
COL.COLO4_06638 Corchorus olitorius HOM05D006110 ORTHO05D007774 5.0e-56 221.5 108 90.7
Manes.04G156400 Manihot esculenta HOM05D006110 ORTHO05D007774 5.0e-56 221.5 108 89.8
Prupe.7G006200 Prunus persica HOM05D006110 ORTHO05D007774 6.6e-56 221.1 108 89.8
Sc17g0003940 Simmondsia chinensis HOM05D006110 ORTHO05D007774 6.6e-56 221.1 108 90.7
Sed0024249 Sechium edule HOM05D006110 ORTHO05D007774 8.6e-56 220.7 108 89.8
Thecc.10G142600 Theobroma cacao HOM05D006110 ORTHO05D007774 8.6e-56 220.7 108 90.7
GSVIVG01036631001 Vitis vinifera HOM05D006110 ORTHO05D007774 1.1e-55 220.3 108 88.0
Atru.chr12.1309 Acer truncatum HOM05D006110 ORTHO05D007774 4.3e-55 218.4 108 89.8
Ciclev10000631m.g Citrus clementina HOM05D006110 ORTHO05D007774 4.3e-55 218.4 108 88.9
MD14G1003800 Malus domestica HOM05D006110 ORTHO05D007774 4.3e-55 218.4 108 88.9
GSVIVG01036611001 Vitis vinifera HOM05D006110 ORTHO05D007774 5.6e-55 218.0 108 87.0
Cfa010950 Carpinus fangiana HOM05D006110 ORTHO05D007774 7.3e-55 217.6 108 88.0
Dinv11233 Davidia involucrata HOM05D006110 ORTHO05D007774 7.3e-55 217.6 108 89.8
VMungo1080G0231 Vigna mungo HOM05D006110 ORTHO05D007774 7.3e-55 217.6 108 89.8
Haze_02994 Corylus avellana HOM05D006110 ORTHO05D007774 1.2e-54 216.9 108 88.0
Phvul.005G004500 Phaseolus vulgaris HOM05D006110 ORTHO05D007774 1.6e-54 216.5 108 88.9
arahy.Tifrunner.gnm1.ann1.P4BN3A Arachis hypogaea HOM05D006110 ORTHO05D007774 2.8e-54 215.7 108 88.0
arahy.Tifrunner.gnm1.ann1.Y0U2QZ Arachis hypogaea HOM05D006110 ORTHO05D007774 2.8e-54 215.7 108 88.0
MSTRG.16978 Avicennia marina HOM05D006110 ORTHO05D007774 2.8e-54 215.7 108 88.0
Potri.003G194000 Populus trichocarpa HOM05D006110 ORTHO05D007774 2.8e-54 215.7 108 87.0
Gohir.D04G016600 Gossypium hirsutum HOM05D006110 ORTHO05D007774 3.6e-54 215.3 108 88.9
Gorai.012G019300 Gossypium raimondii HOM05D006110 ORTHO05D007774 3.6e-54 215.3 108 88.9
Glyma.04G133800 Glycine max HOM05D006110 ORTHO05D007774 4.7e-54 214.9 108 89.8
THA.LOC104826748 Tarenaya hassleriana HOM05D006110 ORTHO05D007774 6.1e-54 214.5 108 88.0
HPP92_005075 Vanilla planifolia HOM05D006110 ORTHO05D007774 6.1e-54 214.5 109 86.2
Gohir.A05G399300 Gossypium hirsutum HOM05D006110 ORTHO05D007774 1.0e-53 213.8 108 88.9
Lj3g0023685 Lotus japonicus HOM05D006110 ORTHO05D007774 1.8e-53 213.0 108 88.0
Oeu014626.1 Olea europaea HOM05D006110 ORTHO05D007774 1.8e-53 213.0 116 83.6
Potri.001G031700 Populus trichocarpa HOM05D006110 ORTHO05D007774 1.8e-53 213.0 108 88.0
QL04p021435 Quercus lobata HOM05D006110 ORTHO05D007774 1.8e-53 213.0 108 86.1
QL07p029279 Quercus lobata HOM05D006110 ORTHO05D007774 1.8e-53 213.0 108 86.1
Actinidia07968 Actinidia chinensis HOM05D006110 ORTHO05D007774 3.0e-53 212.2 108 87.0
Eucgr.E03954 Eucalyptus grandis HOM05D006110 ORTHO05D007774 3.0e-53 212.2 108 84.3
Lsat_1_v5_gn_6_13001 Lactuca sativa HOM05D006110 ORTHO05D007774 3.0e-53 212.2 108 87.0
EL10Ac7g17197 Beta vulgaris HOM05D006110 ORTHO05D007774 4.0e-53 211.8 108 85.2
MELO3C022813.2 Cucumis melo HOM05D006110 ORTHO05D007774 4.0e-53 211.8 108 86.1
CsaV3_5G023770 Cucumis sativus L. HOM05D006110 ORTHO05D007774 4.0e-53 211.8 108 86.1
Peaxi162Scf00220g00411 Petunia axillaris HOM05D006110 ORTHO05D007774 4.0e-53 211.8 108 86.1
Duzib106G1787 Durio zibethinus HOM05D006110 ORTHO05D007774 8.9e-53 210.7 123 78.9
Rhsim07G0069200 Rhododendron simsii HOM05D006110 ORTHO05D007774 8.9e-53 210.7 108 86.1
CiPaw.06G056300 Carya illinoinensis HOM05D006110 ORTHO05D007774 1.2e-52 210.3 108 87.0
CSS0009585 Camellia sinensis var. sinensis HOM05D006110 ORTHO05D007774 1.5e-52 209.9 108 87.0
ATR0618G428 Amborella trichopoda HOM05D006110 ORTHO05D007774 2.0e-52 209.5 108 87.0
DCAR_022366 Daucus carota HOM05D006110 ORTHO05D007774 2.6e-52 209.1 108 85.2
TAR625G0603 Trochodendron aralioides HOM05D006110 ORTHO05D007774 2.6e-52 209.1 108 86.1
ECA233G5267 Erigeron canadensis HOM05D006110 ORTHO05D007774 3.4e-52 208.8 108 85.2
Aa31LG1G21560 Aethionema arabicum HOM05D006110 ORTHO05D007774 4.4e-52 208.4 108 86.1
CAN.G134.27 Capsicum annuum HOM05D006110 ORTHO05D007774 4.4e-52 208.4 108 86.1
PGR031G3177 Punica granatum HOM05D006110 ORTHO05D007774 4.4e-52 208.4 108 86.1
Ah.08g212940 Amaranthus hybridus HOM05D006110 ORTHO05D007774 5.7e-52 208.0 108 84.3
COL.COLO4_19610 Corchorus olitorius HOM05D006110 ORTHO05D007774 5.7e-52 208.0 132 74.2
Thhalv10013059m.g Eutrema salsugineum HOM05D006110 ORTHO05D007774 5.7e-52 208.0 108 86.1
Migut.B01193 Erythranthe guttata HOM05D006110 ORTHO05D007774 7.5e-52 207.6 108 83.3
Sabra01G0022800 Salix brachista HOM05D006110 ORTHO05D007774 9.8e-52 207.2 123 76.4
Lalb_Chr20g0109811 Lupinus albus HOM05D006110 ORTHO05D007774 1.7e-51 206.5 108 87.0
AL6G20270 Arabidopsis lyrata HOM05D006110 ORTHO05D007774 2.9e-51 205.7 108 84.3
AT5G09860 Arabidopsis thaliana HOM05D006110 ORTHO05D007774 2.9e-51 205.7 108 84.3
Hund12548 Selenicereus undatus HOM05D006110 ORTHO05D007774 3.7e-51 205.3 108 85.2
Lalb_Chr20g0109671 Lupinus albus HOM05D006110 ORTHO05D007774 4.9e-51 204.9 108 86.1
Sp6g33550 Schrenkiella parvula HOM05D006110 ORTHO05D007774 1.1e-50 203.8 108 83.3
CARHR203490 Cardamine hirsuta HOM05D006110 ORTHO05D007774 1.4e-50 203.4 108 84.3
Solyc01g096600.4 Solanum lycopersicum HOM05D006110 ORTHO05D007774 2.4e-50 202.6 108 83.3
Sopen01g040330 Solanum pennellii HOM05D006110 ORTHO05D007774 2.4e-50 202.6 108 83.3
SalBow5G1256 Salvia bowleyana HOM05D006110 ORTHO05D007774 3.2e-50 202.2 124 74.2
Carub.0006s0829 Capsella rubella HOM05D006110 ORTHO05D007774 4.1e-50 201.8 108 83.3
HanXRQChr02g0048711 Helianthus annuus HOM05D006110 ORTHO05D007774 4.1e-50 201.8 108 81.5
MBI03_g05118_MAGBIO Magnolia biondii HOM05D006110 ORTHO05D007774 1.2e-49 200.3 108 80.6
BcaB05g21524 Brassica carinata HOM05D006110 ORTHO05D007774 2.7e-49 199.1 108 80.6
Nn8g38623 Nelumbo nucifera HOM05D006110 ORTHO05D007774 3.5e-49 198.7 108 81.5
Aqoxy3G04239 Aquilegia oxysepala HOM05D006110 ORTHO05D007774 1.7e-48 196.4 108 79.6
Nn3g19142 Nelumbo nucifera HOM05D006110 ORTHO05D007774 1.7e-48 196.4 108 80.6
Os03g0110400 Oryza sativa ssp. japonica HOM05D006110 ORTHO05D007774 2.3e-48 196.1 108 79.6
A02p00200 Brassica napus HOM05D006110 ORTHO05D007774 5.0e-48 194.9 108 79.6
C02p04120 Brassica napus HOM05D006110 ORTHO05D007774 1.1e-47 193.7 108 79.6
BolC2t06374H Brassica oleracea HOM05D006110 ORTHO05D007774 1.1e-47 193.7 108 79.6
Zm00001eb000780 Zea mays HOM05D006110 ORTHO05D007774 1.1e-47 193.7 108 78.7
CDE05G1199 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 2.5e-47 192.6 108 80.6
BcaC03g13281 Brassica carinata HOM05D006110 ORTHO05D007774 5.6e-47 191.4 108 78.7
BraA02t05004Z Brassica rapa HOM05D006110 ORTHO05D007774 5.6e-47 191.4 108 78.7
Mapoly0007s0076 Marchantia polymorpha HOM05D006110 ORTHO05D007774 3.6e-46 188.7 109 78.9
SMO134G0202 Selaginella moellendorffii HOM05D006110 ORTHO05D007774 4.7e-46 188.3 108 76.9
AagrBONN_evm.TU.Sc2ySwM_228.3473 Anthoceros agrestis HOM05D006110 ORTHO05D007774 1.4e-45 186.8 108 76.9
CANSAT01G0073 Cannabis sativa HOM05D006110 ORTHO05D007774 6.8e-45 184.5 83 100.0
PSO063G0799 Papaver somniferum HOM05D006110 ORTHO05D007774 5.8e-44 181.4 108 75.9
AagrBONN_evm.TU.Sc2ySwM_228.3474 Anthoceros agrestis HOM05D006110 ORTHO05D007774 9.8e-44 180.6 108 76.9
PSO782G1399 Papaver somniferum HOM05D006110 ORTHO05D007774 1.3e-43 180.3 108 75.0
vmacro13769 Vaccinium macrocarpon HOM05D006110 ORTHO05D007774 4.1e-42 175.3 197 48.7
ClCG05G014210 Citrullus lanatus HOM05D006110 ORTHO05D007774 3.5e-41 172.2 88 86.4
Cpa.g.sc51.83 Carica papaya HOM05D006110 ORTHO05D007774 4.6e-41 171.8 88 86.4
Lj9A658T58 Lonicera japonica HOM05D006110 ORTHO05D007774 1.3e-40 170.2 83 88.0
Pp3c2_4660 Physcomitrium patens HOM05D006110 ORTHO05D007774 1.3e-40 170.2 108 71.3
AUR62033702 Chenopodium quinoa HOM05D006110 ORTHO05D007774 5.0e-40 168.3 83 84.3
Nitab4.5_0002838g0090 Nicotiana tabacum HOM05D006110 ORTHO05D007774 1.1e-39 167.2 88 85.2
AUR62036785 Chenopodium quinoa HOM05D006110 ORTHO05D007774 8.9e-37 157.5 108 70.4
SGA_v2.0_scaffold342G49409 Striga asiatica HOM05D006110 ORTHO05D007774 3.5e-33 145.6 145 53.1
CBR_g45491 Chara braunii HOM05D006110 ORTHO05D007774 6.0e-33 144.8 109 59.6
unitig_26.g9755 Utricularia gibba HOM05D006110 ORTHO05D007774 6.4e-27 124.8 110 60.0
SEGI_24206 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 8.4e-27 124.4 61 86.9
SEGI_05467 Sequoiadendron giganteum HOM05D006110 ORTHO05D007774 1.1e-15 87.4 47 78.7
CDE05G0354 Ceratophyllum demersum HOM05D006110 ORTHO05D007774 2.8e-14 82.8 49 73.5
Actinidia06221 Actinidia chinensis HOM05D006110 ORTHO05D007774 1.4e-13 80.5 46 76.1
PRCOL_00001172 Prasinoderma coloniale HOM05D006110 ORTHO05D007774 7.1e-10 68.2 136 34.6


User provided reference genes

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